Array 1 280864-278975 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAZH01000002.1 Lacticaseibacillus rhamnosus strain DS18_11 DS18_11_2_length_322089_cov_215.300023, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 280863 36 100.0 31 .................................... TTTAGAATACGATTATAAGACAGTAGTTTGG 280796 36 100.0 30 .................................... AGTAAGGTAGCCAAATACAACCATAAGGGT 280730 36 100.0 30 .................................... AACTATCTAACACGCTATACACAGAATGGC 280664 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 280598 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 280532 36 100.0 30 .................................... TGATTTGCGAGATGTCGCGATAAGAAGTCA 280466 36 100.0 30 .................................... GACAACAGACTCCGTCAACATCAGTCTTAA 280400 36 100.0 30 .................................... ATAAACATCGTATGCGAATCGTAACAACGT 280334 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 280268 36 100.0 30 .................................... CCGTTTTGGTTGCAAAACGAACCGATTACG 280202 36 100.0 30 .................................... AAGGTGTACTGCTTAGCTGACTCCCACGTG 280136 36 100.0 30 .................................... CTCGTGACTTGTCGTGATATGCATACGCGC 280070 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 280004 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 279936 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 279870 36 100.0 30 .................................... AAATGGTTTGAATACCCTTATCCCGCCATT 279804 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCT 279738 36 100.0 30 .................................... AGTCGTGCAAATCCACGTGCGCGCGTTGCA 279672 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 279606 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 279540 36 100.0 30 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGTT 279474 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 279408 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 279342 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 279276 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 279210 36 100.0 30 .................................... AAGCAACATATCAATCAAGCCGAAAAAAAG 279144 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 279078 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 279012 36 86.1 0 .......................AA.C....G...G | T,C [278978,278984] ========== ====== ====== ====== ==================================== ================================ ================== 29 36 99.5 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : ACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //