Array 1 239350-238722 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJTDT010000002.1 Staphylococcus warneri isolate A42_34_SW_DSS, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=================================	=================================	==================
    239349	    33	 100.0	    33	.................................	AACACCACTACCTGATTTCTTTAAGTTTTCAGC	
    239283	    33	 100.0	    33	.................................	AACCGTCGGCTTTTTATTTTAGGAGTTGAAAAT	
    239217	    33	 100.0	    33	.................................	AACAAAGATGGAGAAATATTAGACCCGGTGAAT	
    239151	    33	 100.0	    33	.................................	AACTACAATAGAACGTACTTGCGACTTTCTCAT	
    239085	    33	 100.0	    33	.................................	AACCAAACACCTAATGTTAAAGCGTCTTCAGGT	
    239019	    33	 100.0	    33	.................................	AACTATGCAGAATACGGTCATACTTATTTAGTT	
    238953	    33	 100.0	    33	.................................	AACGAATTAGGCTTTATCACTAACAAAACCGAC	
    238887	    33	 100.0	    33	.................................	AACCAGAAGTTCTTGATTCAATGGATGAGTTAG	
    238821	    33	 100.0	    33	.................................	AACCTGAGGCAGAAATTAATAAAATGCAGCAAT	
    238755	    33	 100.0	     0	.................................	|                                	A [238723]
==========	======	======	======	=================================	=================================	==================
        10	    33	 100.0	    33	GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA	                                 	       

# Left flank :   AAGGATTATATACAGACTTCGTCATCGTTAATCAACAAGGTCATCGTGTGCGACCAGGGCAAGGCTATGTACATCATGTCGCAGTCAATCTACCTACAGATATAGACTTAAACGATATTTATGAGAAAATAGCACGACAACCTAACCCTAACTCCGGCATCATCGATCGATACTTCTTCAAATCATTATACTATCGACATAACCAAATCCTATTCGAATTTGCGACAGCAGAGCCAGGGTTTACCGTTGATACACCCGTCGATAAACTAGGTCAACAACTCAACCTCCCCGATTTCCTAGAGGACAAAAGAGACGAAATCGAAAGCCAATTGAGAGAAATATAAAATACAATATAAAAGCACTCGCTAGTACGGCGAGTGCTTATTTGTGGTTATAAAAGTAGATTTTTATTTGTTTAAGATATATATTTAGATTATCAAGTAGATAATACGAAGTATGTATTACTAAAATTTTTAGTAGTAAAGATTTATACGCTAGAG
# Right flank :  ATTGGAGGATATATGAGTAGCATGAGGAAGCCGATTATAAAAAATATTAGTTATTCTAATGAAGAGCTAGTCAATTCATTAGGCGAGTGGCAACAGAGTGATGATTCCAAATTTTTACTCAGATATCCCACTGTCTATATAATAAATGATAAAAATAAGTCTGATCACTTTAATTTGTATGTTGGTGAAACAACGGATATCAAAAATAGAACTATTCAACATTTGAAAAATGATGTGAAGCTTAAAGACTATTGGAAATCATTTTACAGTTCTGATACGTCTTCAATGTATGTTATAGGACATCCGTTCTTTAATAAGTCTTTAACTTTAGATATAGAAAACAAGTTTATGCAGTATTTGTCTAGTGTAGATGCTGTGACTTCAATATTTAATAGTAGAACAAATCAGCAAAATGAATATTATACTTCTGAAAAATTAGATGAAATATTCACAAATATTTGGCAACAATTACATAAAGAGAATAGCAAACTTTTTCCTAT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTACTCTGTAATTTTAGGTATGAGTGA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTACTCTGTAATTTTAGGTATGAGGTA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-1.60,-3.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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