Array 1 187560-188307 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANL010000001.1 Vibrio metschnikovii strain M5C.1 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 187560 28 100.0 32 ............................ TAACTTGTTTTAGAGAGTCAGAGGTCGAGATT 187620 28 100.0 32 ............................ GTACTGTGATTGCTTATAACTTCGATTTTGAC 187680 28 100.0 32 ............................ TCTCTACTTTTAGCAAACCCCGCATTGTAAGC 187740 28 100.0 32 ............................ GGTTTGTGCTCATTCCTTCGAGCTGAGCAATG 187800 28 100.0 32 ............................ AGTTGGTTGCACTAAAAACCCGTTAATATCCA 187860 28 100.0 32 ............................ TCAAGCGGTTGACCCGTTTAATAAATACTCAC 187920 28 100.0 32 ............................ TGCTGGAGCAATCCACACGGTAGAAATCGAAC 187980 28 100.0 32 ............................ TTCAATTCCAAGCACACCCCCTTATCAGGGCA 188040 28 100.0 32 ............................ TTGCGTCCTGCCATTTTTGCCGCCACAGCATC 188100 28 100.0 32 ............................ TAGCATGTACGCAGCAAGCTGCGACAATGAGC 188160 28 100.0 32 ............................ TTTAATCATTCGAGTAACTAGCGCGCGGATTT 188220 28 100.0 32 ............................ TGAATGTATGGGTTAACAGTTCGTCCGCGTTC 188280 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 13 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAGCTTTTTGCATGATTTACAAGGTTTAAACTGGCTTGGTCCGTTATCTGGTTACTGCCAAGTGAGTGAGATATTGGCTATTCCTGAACAGGTGCAATATCGAGTGATCTCAGTAAAGCGTAGCAATTTAAGTCAAGCGAAGCTCAGACGTTTGATCGCTCGCGGTAGCATCGATAAAGAAGGTGAAAAACGTTACAAAGTGAAAATGTTTAGCCAAGGTTTTGATAATCCGTACCTAGATTTATTCAGCAGTTCGACGAAGCAGGTACATCGTAAATTTTTTGAGTTTGGTGAAATACAGCCACTGCCAGTATCCGGAAAGTTTGATTCCTATGGGCTAAGTCATACCACTACGGTTCCTTGGTTTTAACCCTATTTTTTTGCTCTTTAAAAATAATCTTTAAATACAAATAGTTACATCGGGTGATTTAAAATAGGGTAAAAATACATTTTTTGCTCTAACTGCTTGTTGTAACTTATTTTTATGTTGTTATTCTATA # Right flank : ACGCCGGATTCGATGGAATCAAACTCCCGCCAGTCATCCCCGCGAAGGCGGGGATCCATTCTGCAACAGATGCCAAGTGCTTAAGTGAGCGATCAATTGGCCACAGATTACTGATACTTCGCATAGATTCCCGCCTACGCGGGAATGACGGTTTGGCTGTGGTTTTGGGAGCTGAACTCCATAGATCCCCGTCATGTTTTGCCTGCTACTGCTGTGAGGCAGAAAATGAAGGCGTAGCGATCATCGAAAACTGATCCACTAAATACACTTAGTCAGCATAGATTCCCACCTTGAGGGCAATGATGCTTGACGCTTTGAATACTCGATTGTTCACCTTGATTACAAGCAAACGTGAGTTTCTTAACAATATGTGCGCCTAATTCCTTAGACACTACGTTGTATGATTGATGTGAGTGGTGGAACACATGAGCTCCCTAACGTTACCTTGCCAGCGAGAGATTGATCTCTCATCAGAGTTAAACGTCGTATTACAAGACAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2345-1837 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANL010000019.1 Vibrio metschnikovii strain M5C.1 Scaffold19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2344 28 100.0 32 ............................ TTTTTATTATTGCGTTCGATAGCTCTAAATAA 2284 28 100.0 32 ............................ ACTTAAGGCAGGCCACTAACAGACGGGTCAAT 2224 28 100.0 32 ............................ TGTCTACGGTTCGAGGGCTTCCAACGTCAAAA 2164 28 100.0 32 ............................ CCAAAGGTTTTGCCTCCTCGATTCACGGCTCA 2104 28 100.0 32 ............................ TATACGTCCGGTGCTAACCTCCAAAAACTTAG 2044 28 100.0 32 ............................ ACCACAGAAAAGCAAGCGTGGGAAGTTTTCAA 1984 28 100.0 32 ............................ TCGCTAGTGTTTCTGCCCCTTGAGTCAATGTG 1924 28 100.0 32 ............................ TGTGGAGGCTGGGGAGTCAGTCGCAGCTAGGC 1864 28 89.3 0 ........T....C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 9 28 98.8 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TCACTTCCATGGTCGAGGTTATGCGACTGAATCATTACGAGCTTTAGTTGAATATTCCCGAAAGTATTTTGGTCTAAAAAATTTCTCCGCTGTGGTTACAGAAGGTAATCTTGGTTCAGAAAAAGTGTTAATCAAAAGTGGATTCACATTACATAGTGTGATTCCTGATGCTTATGAAATTGGTGGTCAAATGTATGCTGACCACATATACATGATGGAAAATATTGTTACATAACAAAGCGTTCAAGAGGGATTCGCAACGCGCAGCATTTTCATTATGCGTTGATTTTATTAGTTTTTAGTGCAATGCGGTTAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGAATTTTAAGTCATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAAGTTACTGATAGAGTTTCATT # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTGGCATTTTCGTTATGCTTTGATTTTATTAGTTTTCAGTGCAATGCGGTGAGTTGGCAGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGCTTTATTGAGCCTCAGCAAAATCAATATATAAATTTTAATGGGAAAGCTGGTCTGATTTTAGCGGTTTTTCATCCTAATTAATTGATAATATGAGTATATTGTTCTTTTGGGTTGCTATTGAAAGTTGAACGATACTTTTGTGTTTTTGTCGGGTTTTGCTCTGATAAATTGTGTACGCAAAAGGTTCGATTTTTGCTGGAAAGTCTCTTTCTTTGGCGTTGTTTGTTCATTGATTCCGCAGGCTATTTCGCTTCAGCATGTCTGGGATCTCATTGACATCTTGCTTGCTGACAGTGTTTGGTTAGCGCAAGTTTATCGATGATTTTGTGCTTTTGTCCTGCTTT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 486548-487115 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANL010000002.1 Vibrio metschnikovii strain M5C.1 Scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 486548 28 100.0 32 ............................ AAAATCTACAGCTGCAAAAATAGCGTCCATAG 486608 28 100.0 32 ............................ GATGATTCTGACGGTGATATCGATTGGGATGA 486668 28 100.0 32 ............................ AAAAAGACAGCGCAAAAAGCGCCGATCCAAAC 486728 28 100.0 32 ............................ TCTGTGGTTAATGTCACCTCTGAAGTATGAAT 486788 28 100.0 32 ............................ GTTAGCGTTTTGACTTCCAAATCAGTTAGCAT 486848 28 100.0 32 ............................ TCATGAGAGTGGGATGAATACAGGACGTATTT 486908 28 100.0 32 ............................ TTTTTTGGTTAGCTTGAGACCGATAAAGGCAA 486968 28 100.0 32 ............................ TCTCTTTTATGCGGCTTGTGCTTCCGATTCGG 487028 28 100.0 32 ............................ ATAATGTAACGTAAAATGTTTGCATTATGGGG 487088 28 92.9 0 .............C..........A... | ========== ====== ====== ====== ============================ ================================ ================== 10 28 99.3 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ACATTATCAGCACAATTATTGTCAGAATCAGTAAAAACGAATGTTTCCTCTGGTAAGTACGTGACTTTTTCAGCGACTGGTGAAATGCCACAAATAGTTATCGATTTGTGGAATGAGGTTTGGAATTATTTTGCTTCTGAACACTGTCCTCACGAGCGAGCGTATACAACAGACTTTGAGTATTACAAAAGTGCTAATTCTGTAGAGATCTCTATTGCTGTTAGATAGTTACATAACAAACGGTTCAAGAGGGACAGCCAACGCGTGGCATTTTTATTATGCGTTGGTTTTGGTGGTTACAGTATTATGCAGCAGCTTGGTAGTGGCGTTGTCTGCCCCTTAACCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACCATTATTAACAATAGGTTACTGCTAAAGTTTCATG # Right flank : ATGGGTAATTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTCAAGAGGGATTCGCAACGCGTAGCATTTTCGTTATGCGTTGATTTTATTAGTTTTCAGCGCAATGCAGTGAGTTGGTAGTTGCGTTACTCACCCCTTAACGCGGCGTTAGGTGCCAATCAGTTATCATCAGTTTTCAAGAAGTAAATCGTGGAGAAAAAATGCAGTTTGCTAGTGCGTTTCAATATAAAAAATGGGCAAACGATGAGTTGCTTGAGTTAGGTGAAAAAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1225-1432 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHANL010000053.1 Vibrio metschnikovii strain M5C.1 Scaffold53, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1225 28 100.0 32 ............................ TTCTGACATGTCAACGTCTCCGAGTTCTTTGT 1285 28 100.0 32 ............................ ATTGTTCACCTTGCACTGCTCAAGTGCTCTTT 1345 28 100.0 32 ............................ AGAAACCGTCATTAATAAAATGACGTCTGGAC 1405 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GTTGTTTCATTTGGTTGAGGCACACGTAAGTCAAATGGAATACCACCATGATTAATCACGGCTTTTGCAAAAATTTTAATAGCTTGTGATGTACTAAGACCCATTTCGTCACAGATGCTAGTAAAAGCAACTTTGGTATCATGGTCTATGCGAGTACTTAGCATTTCTGTTCTCATAACAGCACCTTTAGTTGTACAATGTATTACATAGTTAAACATTAGTATAATGGCACATAACAAACGCTTCAAGAGGGACAGCCAACGCGTGGCATTTTTATTATGCGTTGGCTTTTGTGGTTACGATGTTATGCGGTAAGTTGGTAGTAGCGTTGTCTGCCCCTTAAGCGGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGGATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATAAAGTTTCATA # Right flank : ATATTGGTACTTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGCGGCATTTTCGTTATGCATTGATTTTATTAGTTTTTAGTGCAATGCGGTAAGTTAGTCGTTGCGTTGCTCACCCCTTAACGCGGCGTTATATTTTCGGAGGGTGAATGCTCATAGACAAATTTGAGTTTGAACAAATTGGTTGGAATGGCAGTTTACAGAGTATTTTGGGTTTACTCTCAGATCTTATTCACTATCGGCTAGACCCCAAATTTAAACCGCCTGATAAATATATCGTTCTTAAATCTGATCTTGAAAGCTCTGATATTTTAAGTAAATGGCAGAAAAGTAGACAAGATAATCATGATATGCCTGTCTTTAATCTTTTTCAGACAAAGTACTGAGGAATCCCCTAATGATTTCGATAAAAATCATCAAGTTAAGGTAGATACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAAC # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //