Array 1 1064110-1066460 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056546.1 Citrobacter sp. RHBSTW-00424 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1064110 29 96.6 32 ............................T TTCATTCCATCCTCCGATATTAACCACGTGCG 1064171 29 100.0 32 ............................. GCTTTCACCTAAATTTGCTGTTCAGGTTTCAA 1064232 29 100.0 32 ............................. CGGGCAATTTGCGTTTCAGGGAACTGGCTCTT 1064293 29 100.0 32 ............................. TCTGCTCTCTCCATCGCCGTCATTGAGGCGAC 1064354 29 100.0 32 ............................. ACAGAGGGAGGCCGCTGTCGGGTGCGGTTCGT 1064415 29 100.0 32 ............................. CTGGCCAATCTGGAAAAATTGCGCGATGCCGT 1064476 29 100.0 32 ............................. CTGAGGTCTGCGCTCGCTGATGAGGTGGAAGA 1064537 29 100.0 32 ............................. ATATTCAGAAACTCGGTGAGCGTCTTGGTTTG 1064598 29 100.0 32 ............................. CCTGTCATTCGTTTTGATGGAAATATGCTTCA 1064659 29 100.0 32 ............................. CAAACCGACGAAAAAATCACGCATACCGTCAT 1064720 29 100.0 32 ............................. TGCATCTGGAAGCTGGCAAAGTAGTTACAAAG 1064781 29 100.0 32 ............................. ACGAGCATACGGAGGTGGTTTGGGTACATGAA 1064842 29 100.0 32 ............................. GCGTAACCCCAGCTTCTCTAGCATCTGCTGAG 1064903 29 100.0 33 ............................. ACCGCTGGCACTGGCTGGAGGCTCGCCATTGGG 1064965 29 100.0 32 ............................. CCATCAACCCTGATTTCAATACGCACGACGAT 1065026 29 100.0 32 ............................. TAAAGTACCAATAGTACATATTTAAGATAAAA 1065087 29 100.0 32 ............................. ATTACCAAAGGCAGCCTGAACGGGTTTCGCGT 1065148 29 100.0 32 ............................. AAACCAGACCCGGCGTTGGATAAGCCTCTGCC 1065209 29 100.0 32 ............................. ACAGCCAGATCAGTGGCGTCTTTATGATCTCG 1065270 29 100.0 32 ............................. CGAACAATTTGAACATAACGAGAACCCCGCCA 1065331 29 100.0 32 ............................. GCGGCGCAGCGGCTGCGGCCATCACGCCACGC 1065392 29 100.0 32 ............................. CCGGGTAAAACCATAGGAAAAATCGGGTATGC 1065453 29 100.0 32 ............................. TTTCGTGGAATTGAGATATAGCGACTGACCGA 1065514 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 1065575 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 1065636 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 1065697 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 1065758 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 1065820 29 100.0 32 ............................. GCGATACACACAGCCGCCGATCTTTCCGTTTC 1065881 29 100.0 32 ............................. ATCCTAAACAACAGCTCGCCTATTTGGCCGTA 1065942 29 100.0 32 ............................. ATATCGCCGCAGCACTCACGCAGTTTGCCACC 1066003 29 100.0 32 ............................. CAGGGATAGTCAGCAGCGTTCGCGGTCCCGGC 1066064 29 100.0 32 ............................. GTTTGAATAGTGCATTCATTATTTGCGGGAAC 1066125 29 100.0 32 ............................. AGCGGGGTCGGAGTTACTTTTTGTTTTCGCGT 1066186 29 100.0 34 ............................. ATCGAATATAGACAGTAAGCTAAATTATGCAAGT 1066249 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 1066310 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 1066371 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 1066432 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================== ================== 39 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //