Array 1 13579-14405 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAQS01000089.1 Sporolactobacillus terrae HKM-1 contig000089, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 13579 32 100.0 36 ................................ ACAGGTGAAACTGTATGCACATCATGCGGCCAAGAG 13647 32 100.0 34 ................................ TAATCTCTTAGAAGACGATATTTGGCATAGGGTA 13713 32 100.0 34 ................................ GCTGATATGGGTCTCGGGAAAACGGTTGTTACTC 13779 32 100.0 35 ................................ GCTTAATGGTATGACATTCATTGCATCAAGTCGTC 13846 32 100.0 35 ................................ AAATTTGGGGCGGCGAATTAACGTTTGACAATTGG 13913 32 100.0 36 ................................ ACAAACGTTGACAGTAATTTGGATGAGCTGCAAGAT 13981 32 100.0 34 ................................ CCTTTAAAGGAGGTGAAAACAAAGTGGCGATTAA 14047 32 100.0 33 ................................ CAAGTGATGAGGTAGAACCTTTTTTATCTTTGC 14112 32 100.0 34 ................................ CATCAATCAGTACGGTTCCCGATGCACCGTCTAT 14178 32 100.0 32 ................................ ATTTGCATGCGCCCATTAACCCGCAACGCCTG 14242 32 100.0 34 ................................ ACTCCTTCGCTTTTCTGTCCTTGTCTCGCATTTG 14308 32 100.0 34 ................................ CTCTTCTCGTAAACGTCTCACAAATCCGGCACAA 14374 32 75.0 0 .........T.CA.A....A..CA.....C.. | ========== ====== ====== ====== ================================ ==================================== ================== 13 32 98.1 34 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : TTAGATGAATACCCGCCATTGCTCTGGAAGTGAGGTAAATCCCGTGCTTGTTCTCATCACTTACGATGTTAGTACTGTCACGAACGCCGGCCAAAAGAGATTGAGACGAGTAGCAAAAATTTGTCAAAGATATGGACAGCGCGTTCAGAATTCGGTGTTTGAATGTATCGTTGATACAACTCAATTTACAAGTTTAAAACTAGAATTGTCAGATGTAATTGACAAATCTACAGACAGCTTGAGATTCTATCGACTAGGAAAAAATTATAAAAATAAAGTTGAACATTTTGGGATTAAAAACTCAATTGATTTAGAGGGACCATTACTTTTTTAGTGCGAATGTAAAGTGCACATGAAAATCTAGAATCCTTCGCACCAATGATTTTCAACTTATTTTCAAAAAAATTACATATATTGTATATATGTGTAAATTGATAGTGATAAATTTATGATAATCACAATAAATTACCGATTATTGATAAAAATTTGTAGTAATCGGC # Right flank : TTTTTTTCATCTCCATATTCCGTGTTCTAATAGTAACCAATGTATACAAACCGCCGTGGATTCAGATAATAATGCCATGTGTCTGAAGAGGTGAGGGGTATGGATATGGCTGTTAACGTCAGAGTCTCGAGTGTTGAATTACAGAACTGCAAAAATGTTGTTCAAGGTAAGCTGTATTTTCCTTGTTCGAAAAGTCATTCGCTGAAACGTGCGGATGTGCTGGGTGTGTATGGGCAAAACGGGTCGGGCAAAACGGCGATTGTTTCGGCGTTTCAAGTGGTGCGCACGTTGCTGAACGGTGGGCCGCTTGAGTCGGGCATTGACCGGTTGATCTATCAGCGCAGCGATACGGCGCGTTTTCTTTTTACCTTCTTGATTGGAATGGCGAACAAACACTATGAGGTTGTCTATGATTTTTCCCTGACGAAACGCGATCTGGATGCCGATGATGCAGTGAATTTGGCCAATGATCGTCAGCGCGATCCGGTGACCGTTACCCA # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //