Array 1 17696-16661 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AOUT01000093.1 Leptospira interrogans serovar Szwajizak str. Szwajizak ctg7180000008471, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	=====================================	===================================	==================
     17695	    37	 100.0	    33	.....................................	TATATCATTCGTATATTCGGTTCTTGGCGATGT  	
     17625	    37	 100.0	    34	.....................................	TACAATTCCAACATTTTAAACAACTCCAACAACG 	
     17554	    37	 100.0	    34	.....................................	TTAGATATGTTGGAATTAAGAGAAGCTTTAACAA 	
     17483	    37	 100.0	    34	.....................................	GTCTTGTAAACATTTTATATCTCGTTTATAGTAA 	
     17412	    37	 100.0	    34	.....................................	AGGTAATTTTAGGCGTTTTTTAAAACATATTATA 	
     17341	    37	 100.0	    35	.....................................	TGCTGACATCCCATTTTTTACAGCACTTGTTGCAA	
     17269	    37	 100.0	    34	.....................................	CAGATTGCATCTTGAATGTCGCGAATCCCATTCT 	
     17198	    37	 100.0	    34	.....................................	ACAGATCGCTAGCCAAGTTTGCAACTGGTTACGC 	
     17127	    37	 100.0	    35	.....................................	TCTAACTTTACAATTGCTTCGGCCAATACTATAAT	
     17055	    37	 100.0	    34	.....................................	ACTAGATTCCAGAGCGCGGAGTAGGTTGTCCTTG 	
     16984	    37	 100.0	    34	.....................................	TAATACGAAAAAGCGTAAAGAGCAATGTTTTCTA 	
     16913	    37	 100.0	    34	.....................................	TGAAATTTTTGTATTGGGTTACAATTTACAAAAT 	
     16842	    37	 100.0	    34	.....................................	TAATATGATTTCAAGCCTTGTGCTTTGTCCTTTA 	
     16771	    37	  97.3	    34	...........C.........................	TCCTGAAAGACCCCGATGATTTTGTCAGCGTATC 	
     16700	    36	  89.2	     0	..........................-....A...CT	|                                  	GA,CA [16666,16673]
==========	======	======	======	=====================================	===================================	==================
        15	    37	  99.1	    34	GTTTCTTCCTTTGTTCGCAAAGGAAGTGGATTGAAAC	                                   	       

# Left flank :   ATTTTACAGACAAACCTAAGTTTTATGGTAGTTCCCACATTATTTTACAGACAAACCTAAGTTTTGTGGTAGTTCCCACATTATTTTACAGACAAACCTAAGTTTTGTGGTAGTTCCCACATTTAAAGAATCGATCTGTAGAGTTCAGATTTCAATTTTTTTCAGAAGCATGAATTTCTTACGCCAAACACACATTATATTACAATGATTCAATTGATTCAGAACTAAATATTACGTCTCTTTAGATAATCAAAAATAGTATATTTTTATTATATTATTGACCCTTAAAATCCGATTATTCTATAATAAAACGCTTTTGCGAACCTGTTTCTCCCGATTTTATACGGGACTTTCGCACCCAAACGTATACGCTTCGTTTGGCGATTGAATGGTTTCGCTTAGTGTTTATCAGCATGGCACATACAGGTTCGCAATTATTATGTCTAGAAAAAGCAATGAGTCCCTTTTTCCATACATTTTTGCGAGTCTTTAGAGCCGCT
# Right flank :  TACAACCTAAGAAATATTTTTTATGTCCGATTCGTAAAACCAGTTTGATTTTTTTAATTGTAAACTACTTATGAGATTGAATATTCTAAATTTTAAATGAAGGTATGAAATTTCTCACAAATCCACTTAACATTTCTACGGTTTACTACTTTTTCATTTCTATAATTTTTTGTATAAGTTTTACATTCCATTAAAAAAAATGAGTCTTTATAAAACGTTATTTAAATATAAATAACCACTGTTTATCGTTAGACGACACTTAAATATAAGAAAACTCTTAATATAAAACCTATGAAATATATTCTTTCATCCATTGGATTCGTATTATTTTTGATTGGAAATAATTTAATTTCTGCAGAAATAGAATCTTGTTTTACTTCTTATCCAGAAGTGGTAGTAAGAGATTTTCCTAACACATCCGGAAAAAAAGTTCGTATTATTAAACAATCCATTCCTTTAAAAATTTTAGAAAGAACTTCTACTTTAGAAGAAATTAAAAT

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCTTCCTTTGTTCGCAAAGGAAGTGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:59.46%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-8.30,-8.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : NA
//