Array 1 84539-81918 **** Predicted by CRISPRDetect 2.4 *** >NZ_WJEV01000009.1 Enterococcus cecorum strain PS5 Contig_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 84538 32 100.0 33 ................................ AACGAACTCTTTAATAGTAGATATAGAACGTTT 84473 32 100.0 36 ................................ AAAGCAAGTTCCTTAATCAGAGTATTACGCAAGATT 84405 32 100.0 35 ................................ TAAAGCTAGTGATTGGCAAAGCGTTGTTTTTGATA 84338 32 100.0 34 ................................ TGATTTAGGAGATGGTATTAAAGATGGATTAACT 84272 32 100.0 33 ................................ ATGAGTGTACCAAAAGAAATCTTGGACGCGTAC 84207 32 100.0 34 ................................ GTCCTATAAATTCGATGGCGAAGGCTATGAGTTA 84141 32 100.0 34 ................................ ACTGTATTTTCGCAAGGAATGACAACCACACGTC 84075 32 100.0 33 ................................ TTGTATGGAGGAAAATTAAATGATTAATTTACA 84010 32 100.0 34 ................................ TATACGCTCTGCCAAGTGACTGCTCGTAATCTTG 83944 32 100.0 36 ................................ CATAACAAGCCTACCTTCTCGATAAGCTTGCTCCGC 83876 32 100.0 33 ................................ ACAGTTTGAGAGAAGCTTCAGAAAAAACCGGTT 83811 32 100.0 33 ................................ ACAGTTTGAGAGAAGCTTCAGAAAAAACCGGTT 83746 32 100.0 35 ................................ TGATGAAATGGGTAGCGGAGATGCATTTGACGATA 83679 32 100.0 34 ................................ CACGCTTGCTCTACTTGTATGAAGTAATCTCTGA 83613 32 100.0 34 ................................ GCTCATACCTAAGTCTAAGAGTACAAAAATCTAT 83547 32 100.0 34 ................................ AGCAAACGTTGACTACTTTAGTTGCTGATGAAAC 83481 32 100.0 34 ................................ ATACTAGAATGAAGGTATTCTCTAATCGTATTAG 83415 32 100.0 34 ................................ CAAACATCCTTTCTCCTGCTTACCCGGCAGTTCG 83349 32 100.0 34 ................................ TTGACTTTCTCAGACGATGAATGAGAAGTACTAA 83283 32 100.0 34 ................................ TATTAACATCAAGTGCTTTTAACATGTATTACCT 83217 32 100.0 34 ................................ GCTAAAAATTGTTGGATTCGACAATGTAATTTTT 83151 32 100.0 34 ................................ TCCCCAAGCTTTCCACGCTACAGCACCAATTGTA 83085 32 100.0 35 ................................ TGAGAATCCTGAATTTACTACTTATTTTAGATTTA 83018 32 100.0 35 ................................ ATCATATCAGCATCAAAATATAATCGATAGCCATT 82951 32 100.0 33 ................................ ATAATAAAATTCCTCCTATTAAATAAAATTATT 82886 32 100.0 35 ................................ CCTACTGCAAGACATACGAAACATGGATAGTGATC 82819 32 100.0 34 ................................ AAGTTGGTAGCGTTGATGACTACCGTTTGACTAA 82753 32 100.0 35 ................................ TCACTCATCGGTTACCACCTCGATGTCAGCAAAGT 82686 32 100.0 35 ................................ AAGATCAGGGCAAAATTGTGACTTACGATATTCGC 82619 32 100.0 37 ................................ CTTGATGCGGCTATGATGAAACGCTGCGACCATCACC 82550 32 96.9 34 ..T............................. GTTTACTTTTCTTCACAGGCCTGCGCATCAACGA 82484 32 96.9 35 ......................A......... CATTAGCACTACTGGTCTGAGTCGATTGCCCAGCT 82417 32 100.0 34 ................................ CAAAAATCTGCATGATAAAGTCGCTAACCGCTTG 82351 32 100.0 36 ................................ AACGAATTTAAAAAAGAAATTGGAGGGGAAGTAACA 82283 32 100.0 36 ................................ TAAATGGTTAACTTTATACATAACAGACTTTAGAAT 82215 32 100.0 35 ................................ CAAATACGGTTGGTCTTGTTAAGATGCCGCCTTTT 82148 32 100.0 35 ................................ TAAAAAAGACGGCACATCCAAATGACTGTCTAAAT 82081 32 100.0 35 ................................ TTCAACATATTCTAATTCCATTCGTCGCTTAGCAA 82014 32 96.9 33 .............C.................. TAGTGAAATACATACCAAAAAGTGCATTAAAGT 81949 32 93.8 0 A............C.................. | ========== ====== ====== ====== ================================ ===================================== ================== 40 32 99.6 34 GTCTCACCTTACATAGGTGAGTGGATTGAAAT # Left flank : CAATTACTTGCAAAATCAATTCGTGGTGATATTTCAGGTTATCCCCCTTTTCTCATATAATTTGGTGATAACAATGATGGTATTAATAACATATGACGTAAATACAGAAGATAGACATGGAAGAAAGAGGTTGAGGAAAGTTGCAGAATTATGTGTTGATTATGGACAAAGAGTTCAAAATTCTGTTTTTGAGTGTTCTTTAGCCCCTGCTGAGTATGTTGAAATTAAAGAAAGACTATTAAAAATAATTGATGAAACAACGGATAGTATCAGATTTTATAATCTCGGGAAAAACTGGCAACATAGAGTTGAAAAAATAGGATTTGATAATTCGTATGATCCAGATAAAGATTTGTTAATTTTTTGAGTTGAGCGAACCTATAGTGAACAGAAAATCATATATAGGTTCGCCTTAAATAAATGATATTTATCTAGATTTTTATCAATTATCAAAATGGTTATCACTTATAATTATGTTATAAACTGCGCTATTTCGCGCA # Right flank : AGTTTTACTGATACCACATCATTAAGAGTACAATTTGAGAATTATGTAGACCAACCTCCCCAAGCTAAGTGACTTTTGGGAGGTTGGTTTGGTTGGGTTATTCTGCTAGTTTGACGATTTGGGTGCCGTGGAGTTCGTGGATGCCAAGTTGGTGGGCGATTTCTTCGGCATTTTCGTAAGTGATTTGTCCGCCTGGTAAGATGGTGATGCGATCAGCTGCATAGTCAATCAATTCTTTTAAGCGTGGGAGAGTGTCTAAGATGGATTCACTCATTGGACCACCATGGGTAAGGATACGATGGACACCGTGATCAGCTAACCAGTCAATGGCTTCAAATTGGCGTTCGACGGGTATTTCGTCAAAGGCCATGTGGAAAGTAATCTGTAAACCTTCTGCGACTTCAATGAGTTCTTCCATCGCCTCTTCGTCAATCCAGTTACTTGGAGTCAGGCAACCAAAGACCACGCCATCGACACCAAGTTTTTTTGCTTCAATCAGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCTTACATAGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //