Array 1 14528-13568 **** Predicted by CRISPRDetect 2.4 *** >NZ_PZCC01000023.1 Staphylococcus chromogenes strain SNUC 255 contig023, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 14527 36 100.0 30 .................................... GTTTTCTCTATGAGTTTATCCAAATCATAT 14461 36 100.0 30 .................................... TAAAACTTTTTTAAAGATTTATTCGGAACT 14395 36 100.0 30 .................................... TCACTTTTTTAATGGCTCTGTCGACAGTAG 14329 36 100.0 30 .................................... TTACTGTTTATGATAACATCAAAAATAACT 14263 36 100.0 30 .................................... CTAACAACACTAGATTAGTTGGGCAAGGTA 14197 36 100.0 30 .................................... TCATCAAACAGATTCGTGCATTTATGAACG 14131 36 100.0 29 .................................... GTTCAATGCGTGGGCAAATAGTGCGAGTA 14066 36 100.0 30 .................................... AATGAGGCACTCATTTCCCCCTCTAACGTA 14000 36 100.0 30 .................................... TAATCTTTCAATAATCCCTTGTTGATCACT 13934 36 100.0 30 .................................... CAGTTTCATTAGCAATGTTCTTTAAATCTC 13868 36 100.0 30 .................................... TTATGTTGTATTGTATTAATCCGTTGACGG 13802 36 100.0 30 .................................... GTGACTCAATCTAAACTCGTTTTCGCCTTC 13736 36 100.0 32 .................................... TTCAAGCTCATCAAATAAGTCCTGGTTGCTAA 13668 36 100.0 30 .................................... ATATGCCGAAATATAAAGATAATGTTGATA 13602 35 83.3 0 .........................G.TTT.-...G | ========== ====== ====== ====== ==================================== ================================ ================== 15 36 98.9 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC # Left flank : TGATGACACCTTCATCATTTTCTTCTTTATTATCTTCACTATGACTAGCCGCAATCGTTAAAATATTGTTGTTAAAATCAACAGTAATATCAGATTTGTCCATACCTGGTAATTCAGCAGATACGACATAAGCATCGTCACGTTCAGTAATATCTGTTTTAAAGTCGTTTGTATTTAATAAACCTTGTCCAAAGTCTCTAAATAAGTCACTTGGATTCATGTCAAAAATTGAATTGTTAAATGGTTTCATTTGGAATGCCATAAAGCATCGCTCCTTCATATTATCATTATTTCGTCAATATCAAGAAACTAGTTGTGAGAAGGGGATAACTGATGTCCTATCCCTTACAAGTCTTATTATAAGACAAAGGTCAAAATTAGTCAAGGTCAAAGTTTGATGTTCATTTTGATCTTAATCAGGAAACGTAAATAAATTAGAGAAACCTTTACATATCAAGGGGTTATGCAATTGAGAGAGATATAGTATACTGTAGCTAGAG # Right flank : TGCATTATGTACTGTAAAATAGAATTGAAAATTATCTTGACTTAATATTCTTACATGTTAGAATATTCTTACAAGTACTTATTGTGCTTATACCTAAAATTACAGAATCTACTGAAACAAGACAATATGTCGTGTTTATCCCACTAATTTATTAGTGGGAATTTTTTTATGCTTAATTTATAATTGTAACTAAAAAGGGGGATACATAACATGACGAATTATATACTTGGACTCGATATAGGTATTACTTCTGTTGGATACGGGATTGTTAACAGTGAGACGAGAGATATTATAGATGCAGGAGTGCGACTTTTTCCCGAAGCAAATGTAAATAATAATGAAGGTCGACGTAGTAAAAGAGGAGCACGCCGTCTTAAAAGAAGACGTATACACCGTTTAGAGAGAGTCAAACAGCTTTTAGCCGAATACGAATTGGTAGATTCTTCATCTATCCCACATAGTACCAACCCTTATGAAATACGGGTAAGAGGATTAAGAGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //