Array 1 82420-82066 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV804514.1 Bacteroides sp. HMSC067B03 Scaffold1028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 82419 47 100.0 30 ............................................... GCATTGATGCATAGATAAATATAGGTATTA 82342 47 100.0 30 ............................................... CAGATGCGACAAAAGCAACAATAACACTCA 82265 47 100.0 30 ............................................... AGAAACATCCACGCGGAGCAATAAAGGGTA 82188 47 100.0 29 ............................................... AAATTATGGCAGTTGTAAGAACCTTAGGT 82112 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 5 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Left flank : TCGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCGAGTAATAGCATTCATGTCAATATCACGAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCGACGAGTCAAGCGTATACGTAGACGCTTTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCCATATTTTAGGAATACATTTGTGATAGCTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCTGTTATCTTTTTGATTACGCTACAAATTTAGTTGTGATTTGCTTTCAAATTAGTATCTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATTAGTATCTTTGAGCCATTGAATACAGCGGTATCAAGATTACGAACCACCTTAATGT # Right flank : GTTAAATAGTATAATAATTATAACGTATCCTATATCTTCATTTTTTTTCGCTCTTTTTTTAATTTTCAATAAAATGAATTTCTACCTAAAACAAATGCTACTTTATACAAACCTTCTTTTTGAACTGTTGCAAATTTTGCAACAGTTGAATCTATCTGTAGTTCACCACAATCAAATATATTTTTAATATGAAGCGATATTGTTGACTTATTACGTTGAAATAGCTCTGCCACCTGATCTAGCAACCATACTATATCATTATATACAGTCACTTCTATTTTAGAAACTCCATCTATTGTTTGATATAAAAGTATCTCACCTTTCTTGTTTTCTTCCATTGAATATAAGCTTACTATTTAGATCATTTCAAAATTAAGAACTAACACTATTCAGATTTACCTAATTTGACAATATTTCCCAACCTATCAACTTTAACAGGAATACAAATCTCCTTAATCATCTCATTGGAGATTGCCCTTTCCATTTTATTAAGAGGTGAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 83072-82643 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV804514.1 Bacteroides sp. HMSC067B03 Scaffold1028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 83071 47 100.0 30 ............................................... AAGCCGAGGTCTGAACAGGACGAGTACGGG 82994 47 100.0 30 ............................................... TCCGTACAGGTTTGGGAGAGGCTGAATATC 82917 47 100.0 29 ............................................... GAGTAATAGCATTCATGTCAATATCACGA 82841 47 100.0 29 ............................................... GACGAGTCAAGCGTATACGTAGACGCTTT 82765 47 100.0 29 ............................................... CATATTTTAGGAATACATTTGTGATAGCT 82689 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Left flank : NNNNNNNNNNNNNNNTCAAATTAGTATCTTTGAGCCATTGAATACAGCTTCTTCAATTGTACCGTCTAAGTCTATCAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCTATTCAAGAAAAACTTGAATTAGCTTATCAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCCTTTCCTGATGTGTCCAGACCGCCGATATAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCCTAAGAAAACCACAAAGGATGATAAAGGTGTTGTGATTTGCTTTCAAATTAGTATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATTAGTATCTTTGAGCCATTGAATACAGCACGAGCCTTTCGGGCGCTGTGAGCGCTGCA # Right flank : TGTTATCTTTTTGATTACGCTACAAATTTAGTTGTGATTTGCTTTCAAATTAGTATCTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATTAGTATCTTTGAGCCATTGAATACAGCGGTATCAAGATTACGAACCACCTTAATGTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCGCATTGATGCATAGATAAATATAGGTATTAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCCAGATGCGACAAAAGCAACAATAACACTCAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGCAGAAACATCCACGCGGAGCAATAAAGGGTAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAGCCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 3 83294-83571 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV804514.1 Bacteroides sp. HMSC067B03 Scaffold1028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================ ============================= ================== 83294 48 100.0 29 ................................................ ATATCGGCGGTCTGGACACATCAGGAAAG 83371 48 100.0 29 ................................................ GATAAGCTAATTCAAGTTTTTCTTGAATA 83448 48 100.0 28 ................................................ GATAGACTTAGACGGTACAATTGAAGAA 83524 48 68.8 0 .................................NNNNNNNNNNNNNNN | ========== ====== ====== ====== ================================================ ============================= ================== 4 48 92.2 29 GCTGTATTCAATGGCTCAAAGATACTAATTTGAAAGCAAATCACAACT # Left flank : CGCTGTATTCAATGGCTCAAAGATACTAATTTGAAAGCAAATCACAACTCGTGATATTGACATGAATGCTATTACTCGCTGTATTCAATGGCTCAAAGATACTAATTTGAAAGCAAATCACAACGATATTCAGCCTCTCCCAAACCTGTACGGAGCTGTATTCAATGGCTCAAAGATACTAATTTGAAAGCAAATCACAACCCCGTACTCGTCCTGTTCAGACCTCGGCTTGCTGTATTCAATGGCTCAAAGATACTAATTTGAAAGCAAATCACAACTGCAGCGCTCACAGCGCCCGAAAGGCTCGTGCTGTATTCAATGGCTCAAAGATACTAATTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGATACTAATTTGAAAGCAAATCACAACACCTTTATCATCCTTTGTGGTTTTCTTAG # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATACTAATTTGAAAGCAAATCACAACAAAGCAAGTTGCGTAAAAAAAGAGATGGCGCTGTATTCAATGGCTCAAATTTAGATATAAATTGCGATTTATATGCCAGTGTAATAAGAAAAAGTCAAGCCCACCCCTATCTTTATGGCGTGAGAGGTATCGATGGACGAGCCTCAAAATAAATGTTTGACGAGCTCATAGTCTCAAAAATGTTATCTCCAATGAGAATAGTATGTGGTCTTGACGTTCACAAAGATAGTGTATTTGCCTGTATCTTGAATGATAATGGCGACAAACTAGAATTCAAATATGGTGTTTTGACGCCTGAGTTGGAAGAGTTACATCAAGTTAGTGAACTCTTATTTCATCAAGTAGTTGCCTGGTAGGAAGAGTGATGTCCGTGATGCGGCTTGGA # Questionable array : NO Score: 4.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:-0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTATTCAATGGCTCAAAGATACTAATTTGAAAGCAAATCACAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //