Array 1 75256-74694 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBPG01000031.1 Bacillus luti strain CH155b_5T NODE_144_length_248982_cov_66.402336, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 75255 32 84.4 35 ....T....CT.G.....A............. CATTGGCGGTAGTTCATAAGTAACAACAAATGGAT 75188 31 93.8 33 .......-..C..................... GATGTATTTACGTATCAAGAGTTAATGGACCAT G [75176] 75123 32 100.0 34 ................................ TCACGAACACTGTTACATTACAAATACAGAATGC 75057 32 93.8 34 ................A.A............. AGAGGGCGTTGATTATGTGTAGGAAAGTAATTTT 74991 31 90.6 35 ......T..........-.T............ CAGGCTGTCGCTTAACGGTGTGGCTGGAGCGTTTT 74925 32 87.5 33 ..........TC..G......A.......... GATAAAGGGTTTGTAATCATAAAAGATATTGTT 74860 32 90.6 36 ...A......G........A............ TCTGAGGGGACACCTGATATGGAAGAACTAAGAGGA 74792 32 93.8 35 ...A...............T............ TTAGATTATTTCAATGCAAAAATAGAAGTAAACAA 74725 32 93.8 0 ..................AT............ | ========== ====== ====== ====== ================================ ==================================== ================== 9 32 92.0 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : ATCCGATTGACATTACTAGTATGCAAATTACGAAAAGTGTAATGTCTGAGCCTGGGAAAGATAAAGGTTCAGATACGATGGGGATGAAGCATGGTGTTGATCTTGGAGCTTATATATTTTATGGAAGTATTCATATGCAATGAGCAAAGAAGACAGATTTTACCAAAGGTGATGCGGAAAAGATTAAAAATGAACTGGTTACATTGTTTGGAAATGATGGGTCAGCAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGTTTGTTGGTGGAAACATAATTCAAAACTTGGCCAGTACTCTTCCGCAAAAGTACACCGTTTACTGGATATTAAGCGGAACATTGACGAACCAAAAATAATTGATGACTATAACATTTTGGTAAAAGAATTAGATATTTTAAAAGTGGCTATTATTGATGGACTGTAATGAAGAAAACGTTAGAATAATTGATGGAAAGCGTATTTATTAAAAAGTTAATCAACCATTTATTAAAGAAAA # Right flank : ATTAGACGAGATATATCCGCAGAAGAAGAATTACGTCGCACCTTATATAGGTGCGACTGTAAGGACTGGTAAGATGCTTGATAGTAATTTAGTGTCTCTGCTGGAATAAGAGGACCTGTTTCAATTCATACAGCTGATCCAATTGACATTACTAGTATGCAGATTACGAAAATTATAAATTCTGAGCATGAGAAGGATAAAGGTTCAGATACAATTGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATTAATACGCAATTAGCAGAAAAGACAGGTTTTACTAACGAAGGTGCAGAAAAGATTAAAAATGAATTGGTTACATTGTTTGAAAATGATGCATCAACAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGTTTGTTGGTGAAATCATAATTCAAAACTTGGTCAATACTCCTCTGCAAAAGTACATCGTTTATTAGAGGTTAAACGGAATATTGATGAACCAAAAACAATTGA # Questionable array : NO Score: 6.61 # Score Detail : 1:0, 2:3, 3:3, 4:0.60, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.25, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [5-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 82869-82312 **** Predicted by CRISPRDetect 2.4 *** >NZ_WBPG01000031.1 Bacillus luti strain CH155b_5T NODE_144_length_248982_cov_66.402336, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 82868 31 93.8 34 .........T..-................... TCTTATGGTGGTGATGAAGATGTAGAAGATACAG A [82859] 82802 31 90.6 34 .........T..-......T............ CAAGGGAACATTGAATTGGTGTTTAACCAATCCG A [82793] 82736 31 78.1 34 ........C..TA.-.A....G.....A.... GCGGTAAGGAGTGGCGCACTGGCAAGGACACACA 82671 31 96.9 34 ............-................... TTCGGATATGAAGAAAAAGGCGTAAACTAAAACA A [82662] 82605 32 100.0 33 ................................ ATATAGTATCGGTGGTCCTAAAGGGTTATTACA 82540 32 93.8 33 ....................A..........A CGTGAGGTAAACACAGGTTACGAAGCTAACGAA 82475 32 100.0 35 ................................ TTCAAGTATTGGAAGAAAAACAAGAAGAATGATAA 82408 32 90.6 33 ..........AT........A........... TGTAGATAAAGATAAGAATGATTCACCGCCTGT 82343 32 90.6 0 .........T.T...............A.... | ========== ====== ====== ====== ================================ =================================== ================== 9 32 92.7 34 GTCGCACCTCTAGTAGGTGCGTGGATTGAAAT # Left flank : AAGAATGTGGAGAAGAATATGTATGTACTAATGACGATATATGTGAAATAGGAACATGTGTAAATTGTGGAGCGAAGCATGAAATTTCTACGTGTGAAAGATGTGAAGTAACATATAACCAAAATATTGATGGTGGAGAATATATCTGTCAAAATTGCTTGGAGCATTATTTAGAGGAATAGGGAATTTGATGTTTAGCTCTAAAAATCTCTCTACAAATTAATATATGTATATAATTCACAAAAAGTGTTGTATTGTATAAAAATACCAATATTTTATAATTATGAATCGAATAGTAATAGATTAACCAAAAGTTATTTTAATTTTTTAGGTGCGAATGTATAGTAAACATGAAATTCCTAGTACATTCGCACCTGGAATTCTCATAATTTATGATTGGAATTTATGATTTTTATACAAATTACTTTATTAAATAAAAATATTTGTATACTTTTGAATAGAATTAACGTATTTGTGGTTGATTTTGAACACAAATCGCT # Right flank : ATCACAAGATTGAGGAAGAAGGGGTTTTTTAGGTAATGCTTTAACTTCAAAACAGTCTTCAGCTCATTAGATACTCAACCCGGAGCATCTATCCCTGCAGTATCTAACACACATGTTAAAAATATAAATTGGAGGGAGATTGAATGACCTACATTGCCCATATCCGCGAGAGTGACAGTCAAGTACAAACAGTTGAAGAGCATTTATTAGGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTGGCTGGTTTAGCCGGTATGCTCCATGATATGGGGAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAGGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATTATTCCTTACAAAGGGATAATATCCGAGATAGTGGGAAACGCTATTATTTCTCACCACGGATACCTTCAA # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCTAGTAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [6-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //