Array 1 49844-49017 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_GG669901.1 Limosilactobacillus fermentum ATCC 14931 SCAFFOLD2, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     49843	    36	 100.0	    30	....................................	CACTACCTGAAGTTAGCGGCAGGGAAACAG	
     49777	    36	 100.0	    30	....................................	TCTGGGTCGCGGGCCAGACGCCCGACTAAA	
     49711	    36	 100.0	    30	....................................	GCTTGTGAGTTAACCAGCGCCGTTAGCTGG	
     49645	    36	 100.0	    30	....................................	CTGTGTCGCTGTTGGATTGGTATTCGTCCC	
     49579	    36	 100.0	    30	....................................	ACTTCATCTCTAAAGCCTTACATAACCACT	
     49513	    36	 100.0	    30	....................................	TCGTTTTCCCACTTACGAAGGGTCGGTTCG	
     49447	    36	 100.0	    30	....................................	CACACTATGAAGCCGACACTGAAGAAGCAA	
     49381	    36	 100.0	    30	....................................	GAACAGAATCCTGACTATTACATCGATACA	
     49315	    36	 100.0	    30	....................................	ATGGTGTCGTAGCCGATTGCTTCTTCAGCT	
     49249	    36	 100.0	    30	....................................	ACCCTTAAATCAGGAAACACTCAAGCAGTG	
     49183	    36	 100.0	    30	....................................	ACACGTCAGTTGAAAGGTCAAAGCTGATTA	
     49117	    36	 100.0	    30	....................................	AAGCTCACGCCTGACTGTGTGGGATGGCAT	
     49051	    35	  86.1	     0	...........................-.TT..A.T	|                             	
==========	======	======	======	====================================	==============================	==================
        13	    36	  98.9	    30	GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	                              	       

# Left flank :   TAATCCAACCAAGCTTGATAGCTACCAAACAGCACTTGATAAGATGATTGTCAAAAATCTTAGCATTCAGAAACGAGATCGGATGAATGACCTTGCTCGTGAGGTGTTCTCAGAGATGCAAGATTCTTTGTTCGAATTCGACTTACCGTTGGAGGTGCGGTATGACGAGAGCCTCTTGAGATTATACAAATATGCGAAAATTAAATATTTGACGCAAGTAATAAGGCAACCTTATGGTATAATTGAAACCGATCTAAAATTACATCTCGAATTAAAAGACTGTCAGGTTCTTGGGTATTGTAATGTCGCTAATTACTTATTGCCTGAGCAGATACAGGAATTCGCTACTCTTGTTGAGAAAACCGAATTGGCAGTTTTATTAGTGGAATTCTCAGAAAAGAGAGAAACTCTACAACAACTCAAACAGGATATTTACCGGATTGATCGGGACTTCGTGGACTGGCACGAATAGATCGTTAGTTTTTGATGAGAAAATAACG
# Right flank :  TATAGACTAAGGGCGTTGCTGTTTTTAGCAATGCCTTTTTTAGAAGTGATGAGGGAAAGGTAAATGTTTTCACGTTGGTAATCTGACGGGAACTTTAGTGGGCGATGTGCTAGGATAGGGCCAAAATGATTGGAAGTGTTTGCCATGCAAATTGATCCCGAACGGATTCGCCCCGAACTGCGCCGAATCGGCAAGGTGGGGTACGCAATCAACCTGATGGCCAGCCCGCACGCCTGCAACGAATGGGACGAATAACGGCGAAGGCGAAAATGCCCATTCACTCGCGGCGGGTGATCAAACAAGACGTTTGGATTGAACGCCCTGACCATAGCAAGCTTCGGCTGGCTATTTTCCGGGCCAAGCAAGTTGCTACCAAGCGCCCGGCCACCGGGATCCTCTGGTTGCACGGGGGAGGCTACGCCTTGGAAACCGCCGAAAATGCCTTGGTTTATGCTGAACAGTTGGTGGCTGACGGACGGTCCGTGATGGTGGCGCCGGAT

# Questionable array : NO	 Score: 3.21
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-1.80,-2.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.78   Confidence: HIGH] 

# Array family : NA
//