Array 1 171709-173750 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV816968.1 Actinomyces sp. HMSC065F12 Scaffold92, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 171709 28 100.0 33 ............................ CGCTTTGGCGTCGATCGTGCCCACGGTGTTTGA 171770 28 100.0 33 ............................ CAATCTCAGCGCAATTGCCCAAGGCTCAGGCGA 171831 28 100.0 34 ............................ CCGGTTGTGGCAAGGTCGGTGGTGTCGCGTTTGA 171893 28 100.0 33 ............................ CAGCAAACAGTGCCGGTAAGACGGTCAGCGGCC 171954 28 100.0 33 ............................ TGGTGTCCATAGGGGTTTGCCTTTCGGTGTCTG 172015 28 100.0 33 ............................ CATTCCGGTCTCGGTGACGAGATCCTCGAGGTC 172076 28 100.0 33 ............................ CACAAAAAAGAGCCTGAAAGGAGCGAAAGATGA 172137 28 100.0 33 ............................ CATGTTCATGCATACATACGATCTGCCCGGCGA 172198 28 100.0 33 ............................ CATGACGCCGGCATTCTACCGCCCGGCCCTTGA 172259 28 100.0 33 ............................ CGGGTATGGGCCTGGCATGACGGATGGGATTTC 172320 28 100.0 33 ............................ CTCGGCAGTGGGCTTCGTACACTCCACCACTCA 172381 28 100.0 33 ............................ CAACAAAGCGCAAAACTAGCAAAGCCATTAGCG 172442 28 100.0 33 ............................ CGCAGGTCTGTCACCGCGCGTGCTGCCACCAGA 172503 28 100.0 33 ............................ CACTTCGATATATCAGCAGATGAAGTATTTGAG 172564 28 100.0 33 ............................ CGGCTTTTTGGTAACGAGATGGCGCATGGTGAT 172625 28 100.0 33 ............................ CGCGGTAGTAGCGTTGCATACCGCGCACAAACT 172686 28 100.0 33 ............................ CGTGCGGTGTCTCCCATGACTGTTCGCATCCTC 172747 28 100.0 33 ............................ CAGATGTCGATCTTTAATTGATTCGAGCTCATT 172808 28 100.0 33 ............................ CGGTGTCATGGCGCGGCCGCAAATACTCAAGCG 172869 28 100.0 33 ............................ CGACGCCACGGCAACCACTTTTCCGCATGATCT 172930 28 100.0 33 ............................ CATGGACGGCATCACGCCAGTCCGTGTCGCGCG 172991 28 100.0 33 ............................ CGGTAAGCCAGAGGCCGGAATTATTCGCATCGT 173052 28 100.0 33 ............................ CTACATGAAGAAGCTAGGCCAAGCGTTCAATAA 173113 28 100.0 33 ............................ CATCGACCGGCGTAGTCCCACCCACCCGCGTCG 173174 28 100.0 33 ............................ CCTGCAGCAGCGCGGAAATCATCATCCGCATCA 173235 28 100.0 33 ............................ CAAGTCACGCACCTCACTGCGCGTGTCGTTCAC 173296 28 100.0 33 ............................ CGAACTCATGGGCATATAAGCCCAATCAGGTTT 173357 28 100.0 33 ............................ TGATATTGACCGCGCGCAGTCAAAGTACTCGTT 173418 28 100.0 33 ............................ CGGCTCTGACCTCGCACAATTCACACCAAACGA 173479 28 100.0 33 ............................ CGGATTTGGAAGAAAAATAGATAGAGCAGGGAG 173540 28 100.0 33 ............................ CGGCGCTTTAGACCCGCTCAGTGTCGCCCGGCA 173601 28 100.0 33 ............................ CGTGCCGCGCCCGCCTCGCACTGCCAGCCACCG 173662 28 100.0 33 ............................ CGGATGGAGCGAATAAACAATGTTGTCGTTCGA 173723 28 92.9 0 ............T...........C... | ========== ====== ====== ====== ============================ ================================== ================== 34 28 99.8 33 CTCTTCCCCGCGCACGCGGGGGTATTTC # Left flank : TCTTCCCCGCGCACGCGGGGGTATTTCCGTGGCGCGCGTCCCGTGGCACGTGAAAACGTGGCTCTTCCCCGCGCACGCGGGGGTATTTCCAGGCATCCCCAACTCGTCCACGCCAGCAGAATCTCTTCCCCGCGCACGCGGGGGTATTTCCGTGCAATCAATCGCATTCGTGCGCTTGAGGGACTCTTCCCCGCGCACGCGGGGGTATTTCAGAGCCAATCATCACCGGCGCGGCTCTTTTTCGCTCTTCCCCGCGCACGCGGGGGTATTTCCCGGTGTCGCGTCGTTCCCTAATCGGCTTCCTCGCTCTTCCCCGCGCACGCGGGGGTATTTCCGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCTTCCCCGCGCACGCGGGGGTATTTCCGGTATCCGTTGGGGTGTGCAGCGTGAGCTGCC # Right flank : CGCACTGGTGCTGCCTCGAACCAATTCCCGAACGCATACCTACTCCCCACAAACGTGTCCGCCCTCGTATGGATCTGACGCAACACAAAGGCGGCCTGTCCGACCCGCCACCCAACACACGTCACACTCAGTTCGTCGATATTCCTGGCGTGCAGCGTTCAATGACGTGGCAGACGAATTCGCCCCAAAGGCTACAGATGCGCCACACCACCGCGGACGTTTCTCAGGTATGCGGTGTTGACGTGGTCATTGCCTAGATCACCGCCGCCGAGTCGGCCTCACCCTCGCAGAAGACGCACTAAGCGTGGAAACTGAATCGACGCACGCCCTCGTACCCAAGACAAAGAGCACATCTAGCGCATCACACAAACCAGTCCCATCACAATCACTATGTTGATCGCTCAAGCAATACTCGACCGAGTCATCCATCGCGTCCTCACCACCAAATCACCACCCACGACCAACCCACTTCCGGAAGCGACCACCGCGTCGAAGCCCGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCGCACGCGGGGGTATTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //