Array 1 20978-19929 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSAA01000053.1 Pseudomonas aeruginosa strain AU18132 NODE_58_length_21313_cov_9.45631_ID_115, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 20977 28 96.4 32 .............T.............. CTAGAGGCCTGCCCAGGCGGACTAACCCACCA 20917 28 100.0 32 ............................ CGGAGTACTGACAGCCCACCGACTCCCTAGAG 20857 28 100.0 32 ............................ GTCGACGTCGATGAACGCCGCGCACGGATGGA 20797 28 100.0 32 ............................ TTGCTAAGCATCCACTGTGCCGCTCCTGTAGC 20737 28 100.0 32 ............................ ACGAAGTGACCGTGGTCCGCCGACAGGGAGGC 20677 28 100.0 32 ............................ ACATGGGAATGCTCTCCTGGCACGAAGAAACG 20617 28 100.0 32 ............................ ATGCTCATTTCGCCACCTCGATTCCGGCTTGT 20557 28 100.0 32 ............................ AACCGCAGATGGCGCTGGACCGGGGCGTGCCG 20497 28 100.0 32 ............................ AGGTTGACCAGCATGGCCGGCATCGACAGCGT 20437 28 100.0 32 ............................ TGGGCCGGCGCCTACGCGGCGCATCAGCCGGT 20377 28 100.0 33 ............................ ATGCAGCCAGGGCTTACTCCGCTGCTGCTGGAC 20316 28 100.0 32 ............................ TTGAGCTTGTCGTTGTACTCGTCGAGGCTCAT 20256 28 96.4 32 .............T.............. AGCGTGCCATGGCGGCGGTAAGTCAAACCGTT 20196 28 96.4 32 .............T.............. TGGTCGAACAGATGGCGGTCCTCGGCCAACTG 20136 28 96.4 32 .............T.............. ATCAGGTACAGCACCAGGGCACCGAAGACGTT 20076 28 96.4 32 .............T.............. ATCGACCACGACAGTGCTTCCCTGGTCTATTC 20016 28 96.4 32 .............T.............. ATTGGCCGTGCAAGGTCCACCAGTCGATGCTT 19956 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 18 28 98.6 32 GTTCACTGCCGTACAGGCAGCTAAGAAA # Left flank : GGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCTCATCACAAGACCTTTTGCCCTCGAACGGCATGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACACCCTTATAAATCAGTAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCGGGAACAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCT # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCTGGAGAGCCGGCGGATAACCGCAAGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTAAGAAA # Alternate repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //