Array 1 8234-6774 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQLS01000095.1 Streptomyces werraensis strain FS97 NODE_95_length_8316_cov_109.837671, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================================== ================== 8233 33 87.9 28 .............................TCCG GGATGGTGACGGGGAGGGGGAGGTCGGC 8172 33 93.9 28 ..................A..........C... TGAGCGACTCCCCAACGGAGTTCCGGTC C [8141] 8110 33 100.0 28 ................................. AGCGGTCAGAAATCTGGCGGAGGAACGC 8049 33 90.9 27 ........................C.T..C... GGTGGACCTGTTCCCGGGGGTGGATCC C [8018] 7988 33 81.8 28 .............G.....T...T.....AC.A CGACCTTGGGCCGCATCCGCGGGTCTCG 7927 33 93.9 28 ..............................CA. CGCCATGTCTCCGTACATCTCCGACGCC 7866 33 90.9 28 ....................A........CC.. AGCTCGGGCAGAACAGGTCCGGGATGCC 7805 33 81.8 24 .......T....A.......AA.........CA TGCAGAAGCTGGTGGAGCTGGCCA 7745 33 84.8 28 .G..............T.............GAG GTGCCGGGGGATGCGATGGATCAGTCGG 7684 33 90.9 24 .............................CGC. GATGGGCCCCTGCCCGGTCTGCTT 7623 33 90.9 28 ...................A..........AC. CGGGGAATCCGCAGCGGAACGTGCGGGT 7562 33 97.0 27 .............................C... AGGGGACGTGGGCGCCCTGTCCGGCGT 7502 33 93.9 29 ..............................AT. GGCTCCATCAACGCGGTCGTCCTCGCCGG 7441 33 93.9 28 .............................CA.. ACCCGCCCACCGAGGAAGAGGAGCAGGA 7380 33 93.9 28 .............................TA.. CGAGGATGCACAGGCCGACGGTGACACC 7319 33 90.9 27 .................A...........TG.. CGCGCTGATGCTGCTCCAGCACCTGTG 7258 33 93.9 27 ..............................AA. CTGGGCAAGACCGCGCGGGAGGTGTTC C [7229] 7197 33 87.9 28 .............................ACCG GCCCGGCGACGGCGGCGCCGAGGAGGGC 7136 33 97.0 29 .......................C......... CGGGCGAGGTGGCCAAGGGGGTGGGGTGG 7075 33 90.9 28 ...................A..........C.T CCGGCCAGAGCGGCATCATCCTGCCCAT 7014 32 84.8 28 .....................-.......TCCA GGGTCAGGCCCGGAGGCTGGTTCCACAG 6954 33 90.9 28 .......................A......A.G AGGCCGTCACCCTCGGCGTACAGCCGCG 6893 33 75.8 53 .......T.A.....A.....A......ATC.A GGCCGACGCTGGGGTGTTCCGCTCTCACCACCAGCGTGATCGTGATGGTGGCC 6807 33 78.8 0 .....T...........A...A......AAC.T | G [6778] ========== ====== ====== ====== ================================= ===================================================== ================== 24 33 89.9 29 GTCCTCCCCGCCGACGCGGGGGTGTTCCGGTGC # Left flank : CTTGCTACCTGCCTCATTACCCACCGACACGTCCAACGGCTTTGTTAGGACCTCTTAAGGTCGGAGAACCACATCACGACGT # Right flank : GAACGTGAGCGTTCGGGTACGCCGTCGCCGTTCTGGTCGGACTTCGGGCAGGGCGTGTCGAATCCGGGGCCGCATGCGAGCTTCAGACCTGAGGGATCACTTTTGCTGATGGGGCTGCTGTTGGCGTACGTGTACCCGTTCATCTGGAGCGGGTCTGCGATGTCGATGACCGGGTCGGCCGAGAGGAAGCGTCCCGAGTTCTGGTCGTACTCGCGGGCTCCGATGTGCGTCAGTCCTGTGTCTGCGTCATCGATGCCGACGCCCAGATAACCGCGTTTGTTCGGCCAGCTCGCCGGCTTGGGACCGCGCAGTTCGCCGTAAGGCTTGTAGGCGCGGCGTGTGACCGGCTGACCGGCCGACAGTTCGACCGCCGTGTTCGCCGTGCCGAGGTGGTCGGTGAGCAGCACGCTGAGCTTGTGGCCCGTCGTGGCACTGTTGGTCGTGGTGCGTACGACGGTCGGGGCGCCGGGCTGGCTGTATGCGCGGGAGGCCCGGGTGAG # Questionable array : NO Score: 3.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.52, 5:-1.5, 6:0.25, 7:-0.05, 8:1, 9:0.09, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGGTGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [10-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.77 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 105237-110197 **** Predicted by CRISPRDetect 2.4 *** >NZ_WQLS01000021.1 Streptomyces werraensis strain FS97 NODE_21_length_110253_cov_111.745703, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================== ================== 105237 33 87.9 28 ..................A..........CG.A CGGTGATCGTGCCGCCTGCGTTGGAGTC 105298 33 90.9 28 ....................A........G..A GGAGCCAGAGGGCACGGTCGCGGAGTCC 105359 33 93.9 28 .............................C..T GTTTCCGGATCCCGTGCCCAGACCCGGT 105420 33 87.9 27 .......T............A........C.A. GTCGATCGCGGACAGTTCGGTGGCGAG G [105450] 105481 33 84.8 28 ....CT.......................GT.T TCGCGCAGATCGGCCGGGACACCGGGCG 105542 33 100.0 28 ................................. CAGTCCGCAACCGTCCGGACCCCGACTC 105603 33 81.8 27 ........T........A...A.......AAC. TGAACGTGAGGTCGTAGCCGTTGAGCC 105663 33 69.7 27 TGT..T..T.....T.....A.G..C.....C. CCTGACCGGGCCCATCGCCCGCATGGC AT [105687] 105725 33 75.8 24 A......T.A..AG....AA.....C....... CGGCACCCCACCGTACTGCTGCAC GACT [105754] 105786 33 81.8 28 .C............T..A........T..CA.. GCTTGGTGTTGCCGGCGATGTCGTCGGC 105847 33 97.0 27 ................................T GATCGCGGCGCTCGCCCCGTGGCTGTC T [105875] 105908 33 90.9 27 ...T.........................C.A. AGTCTGGTCGAGGGCCGTGAGCGTGAG G [105938] 105969 33 90.9 28 ................T............C..T TGTCGAGCATCTGCCCGGCCGCCGCCCG 106030 33 90.9 28 ..............................ACA GCACGAGTGGTGTGATCAGCACCGTCGC 106091 33 93.9 28 .............................G..A TGCAGACGACGCTGAAGAAGGCCCTCGG 106152 33 84.8 27 .........................C.G.AT.C CGACCAGCAGAAGTTGACCTCCCTGAA 106212 33 87.9 28 ........................C....CT.C GCATGTCACTGGTCGAGGCCGCCCGTGA 106273 33 84.8 28 ...........T....T............C.CT CGACGTGGTCGCCGAGCCAGGCAACGTG 106334 33 90.9 28 ...T..........................A.A GGAGGTGAGTGGTGCCGTTCGATCTGCG 106395 33 90.9 28 .............................CG.A TGATGCCGCCCTGCGTCGCGTACATCCC 106456 33 97.0 25 .............................C... ACAACCGGTAGTACGTAGCCGAGTG GGC [106485] 106517 33 97.0 28 ...............................C. GGTAGACGTTGACCCAGGCCACCGTCAG 106578 33 84.8 28 .................C.......CT..A..T CCCGGCGGGCCTTGCACGGGAGGACCTC 106639 33 75.8 27 .....T..........AAA....C.....AT.T GGCCGGCGTCCTTGGGGCCGTTGTCGG 106699 33 72.7 24 ................GA.T.C.CCGT.....A CGCAATGCGAACGCGGTTTCAGAC A [106725] 106757 32 63.6 23 .A.G...TT..........T..C-CC.GA..A. ACAGGACGGTGCCCGTGACGCTG 106812 33 63.6 28 CCT...TT..........AA....C.T..A.TA GCAGGATTTCCCCGCGGTACCGGTCGCC 106873 33 78.8 28 ...G..T.......T....A....C.....T.T GAATCTCGTCGACGAAGAGGTAGTCGAT 106934 33 66.7 28 ...G.GTA.........TAA.....C...C.TC AACAAAGTGTGGCCGATCGCGTGTCTGG 106995 33 90.9 28 ...............A.............AG.. GTTCGATGATGACGCGGACGTCCTCGTC 107056 33 90.9 28 .............................AG.A TTCACGGTCTGCGGGTGGAGGGTGTGGT 107117 33 87.9 28 .............................AAAT GACGCGTCCGGACTCGCCTTCCGTGGTT 107178 33 93.9 28 .............................GA.. GCCAGGTCTACGAAGTCCCGCTCAACGT 107239 33 90.9 28 ............................TC..C CCTCGACGCCCGCGCCGACGCCATCGCG 107300 33 90.9 28 ............A................C.C. TCGGGCCGGTCCCGCCCCACACGTACGG G [107322] 107362 33 97.0 24 ................................A CGAGGTCGACGTGTACCTGATCCA CACC [107391] 107423 33 90.9 28 .............................CA.C GGGCGTGGGGCGGGACGTGGGAGCGGGT 107484 33 90.9 28 .............................GGC. GCATCATCGAGGCCCGCGAGCTGTGGGG 107545 33 97.0 28 ....................A............ CCTCCCGGGTCCGCGGGTTGTGATGCGG C [107550] 107607 33 93.9 30 .....................A........A.. CGATCAACGGTGTGGTGAGCAGCGACACAG 107670 33 93.9 28 ...............................CT CCCCCGGCGCCATCGACTCCGGCGTGGA 107731 33 97.0 26 .............................C... TGGTCGCGCTGGTTCCTCGCGCCCTG GT [107760] 107792 33 87.9 28 ..TT.........................AT.. AGCTGCAGCCGGAGTCGGACGCGCAGCC 107853 33 84.8 28 ...............A..A.....C.....G.C AAGACACCCTCGAGGGCCTGGAGCGCGA 107914 33 90.9 28 .............................ATC. GGCCGAGCTGCGCCGCGATCGTGCCGAT 107975 33 93.9 28 .............................G..C GGCCGTCGTGCCCGCCGTGGTTCACGGT 108036 33 97.0 27 ................................T GATCGCGGCGCTCGCCCCGTGGCTGTC T [108064] 108097 33 87.9 28 ...T.........................A.TC ACCTGTTGCTGCCCCTGCTGGCCCGGTC 108158 33 87.9 28 .........T...................CT.C CGCACCCGTGCGGGGGGATTGCCCGTGC 108219 33 97.0 28 ................................C TCGCCGCGCTGAGCGCCGCCATCCTCAC 108280 33 97.0 28 .............................G... TGGCCCACTCGGGCAGGGACGCGGCGCT 108341 33 90.9 28 A...............T............C... GCCCGTAGACGAGGGCGAGGTCGAGCAG 108402 33 90.9 28 ..............................ACT CCGGGAACTCCAGCTCGTCAAGGAGGCT 108463 33 87.9 28 ...................A.........CTA. GAGAGACGCCAATGCCATGGTTCGTCGT 108524 33 93.9 28 ....................A...........A CGACGGGCCGGTACCAGTCGGGGATGGC 108585 33 100.0 28 ................................. CGCCGGGCGTACCGGTCCCGCCCTGGCC 108646 33 84.8 28 ...........................T.AGAC CTGGCGGCCCGGCCTCTTCCGCATCGCC 108707 33 90.9 28 ......T......................CT.. CCGCGATCGGCAACCTGCGGGAAGCCGT 108768 33 93.9 28 .............................CT.. TCCAGCAGGGCATCATCCCCGCGGACTC 108829 33 93.9 26 .....T.........................A. ATTCACCCGCTGTTCGCGGCGTACGA GT [108858] 108890 33 90.9 28 .............................CA.T CCAGGCATGGCTCGACGCCCACCCCTCC 108951 33 93.9 28 ..............A..............C... CGCAGACTGGGGCTGTTCTCGAGTTGAC C [108979] 109013 33 78.8 27 A..A........A.........G......AT.T GGCCGGCGTCCTTGGGGCCGGTGTCGG CT [109038] 109075 33 75.8 24 ................GA...C.CCGT.....A CGCGATGCGAACGCGGTTTCCGAC A [109101] 109133 32 63.6 22 A..G...TT..........T..C-CC.GA..A. ACAGGACGGTGCCCGTGACGCT Deletion [109187] 109187 33 72.7 29 ......TT..........AA....C.T..A.TA GCAGGATTTTCCCCGCGGTACCGGTCGCC T [109190] 109250 33 78.8 28 ...G..T.......T....T....C.....T.T GAATCTCGTCGACGAAGAGGTAGTCGAT 109311 33 69.7 28 ...G.GTA.........TAT.....C.....TC AACAAAGTGTGGTCGATCGCGTGTCTGG 109372 33 97.0 26 .............................C... CCCGAGGTGCGGATCACCGGCAAGTT AT [109401] 109433 33 90.9 28 .......T.....................G..T CACGCCACGCGACGGTCATGTACGAGGT 109494 33 90.9 28 .............................GT.T CCGCGATGTCGTCCGCGCGCGGGCCCAT 109555 33 90.9 29 .............................GT.A CGTGGTTGTAACCAGCACGCCCCCGAGGA 109617 33 87.9 28 .....T...............A.........CA TCGCCAAGACGGCCAAGGTCGACATCGC 109678 33 93.9 28 ..............................T.C TGCATACCGGCGGGGGAGGTTGCGGGAA 109739 33 93.9 28 .................A..............C GCGGGTGGTCGCCGAGCTTCCCGTAGAG 109800 33 84.8 27 .......................AA...AA..A GCCGGGGGACACGGCGCCGATCGACGC 109860 33 87.9 28 ............AG...............C..T GGAGGGCGGACGTGGTCGCCGCGTGCCT 109921 33 90.9 28 .............G...............C..T GGAGGGCGGACGTGGTCGCCGCGTGCCT 109982 33 90.9 28 .............G...............CT.. AGAGGACGCACTTCCAGAGCGTGAAGTG 110043 33 90.9 28 .............................GA.C CGATCGGCCAGTCCGCGTTCATTCTCCG 110104 33 97.0 27 ...............................T. GGGGTTGCCGTTGGTGAGGCCGGCCGC G [110133] 110165 33 87.9 0 .............................CTCT | ========== ====== ====== ====== ================================= ============================== ================== 82 33 88.0 27 GTCCTCCCCGCCGACGCGGGGGTGTTCCGTCGG # Left flank : AGACGACGACTACGCCGAGACGAACCCACGACCCTCCCGAGGGATGTGGCGCGACCTCGGCCCAGTCTGCGCTCTGGAGATGCAGTGTCCCGGTTCCTGCACAAGTTCGTCCTGCGTCGCGAAGTACTTCTCAGTGCCTCACGCGTAGTGGTCAGCGCGGTAATCCGTGCACTGACCAGCGAACTCGTCAGCTGGCTCTTCTGAGCCAACGGTGACGGACCCCAGGGGTCCGTCACCTCTTACATGCAGACGACCCCCGCCGGCCGAACACGTTCTGCGCAACCGGGCCACACCGCAGGACAAGACGCCCGGTCACAAGCGGACAATGCTGACTCCACACGAACGTAGATGACCCCGCCCTCACCACCGCACCGGACGGCACAAGCCGCCTCGAACGTGTCAACGATCAGGGTCTGGACGTGCAGCAAAACCCCAACAGCACACCCCTGTCACCCCTCACAAGCTGGCCAAATGACCGCCCCTCCGACGTTCGTCGTGAT # Right flank : TAGAGGTCCTAACAGAAGTTGTTGATCAGGTAACCATCGGCTTGTCTGCTCGTTGG # Questionable array : NO Score: 4.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.40, 5:0, 6:0.25, 7:-0.05, 8:1, 9:0.04, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGTCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [78-65] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,1.42 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //