Array 1 15994-13141 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXOO01000049.1 Acinetobacter baumannii strain MC90 49, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 15993 30 93.3 30 ............................AG TCGGCACAGGTAGCAGTTGAGCAGTCATCG 15933 30 93.3 30 ............................GA GTTCTTTCATAACGTAGGCTTTAATGCCTG 15873 30 93.3 30 ............................AA CGTTTCCGCAAATCTGCGAAATACTCGTTG 15813 30 93.3 30 ............................AA TATAGTGGCATCTTCGAGAGTTAAAGGCGG 15753 30 96.7 30 ............................A. CAGAATTTTGTTTACAAGTTCTAAGCGGGA 15693 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 15633 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 15573 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 15513 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 15453 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 15393 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 15333 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 15273 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 15213 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 15153 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 15093 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 15033 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 14973 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 14913 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 14853 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 14793 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 14733 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 14673 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 14613 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 14552 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 14492 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 14432 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 14372 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 14311 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 14251 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 14191 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 14131 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 14071 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 14011 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 13951 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 13891 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 13831 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 13771 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 13711 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 13651 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 13591 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 13531 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 13471 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 13410 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 13350 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 13290 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 13230 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 13170 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 48 30 95.1 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.23, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //