Array 1 196645-194157 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUPZ01000013.1 Sulfurimonas hongkongensis strain AST-10 Contig13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 196644 28 100.0 32 ............................ CTTAGTCGCTTTTTAACACCCTCCAAGACGCT 196584 28 100.0 32 ............................ ACTAACTCACATGTCAACAGGTTCGCGGCTAA 196524 28 100.0 32 ............................ TCAATTCAGATATGTCCGTAAATGGTTGGCTG 196464 28 100.0 32 ............................ GTGGTGCCTAATCAGAGCGTCATTGACGACTT 196404 28 100.0 32 ............................ GCTTAATACCAACCTCCGCAGAATCAGTCCTA 196344 28 100.0 32 ............................ ACTCTTGTGTGCTTCATCCCATAAGATAGTAT 196284 28 100.0 32 ............................ AAAAGCTCAATTAGTGATAGCGGATATTCCAT 196224 28 100.0 32 ............................ ACTCGGAGTGTTAGACTAAGAGATATAATGGG 196164 28 100.0 32 ............................ ATTCAGGAATACCCATTTGGTGTAAGTAACTA 196104 28 100.0 32 ............................ TACACCTCACACATTTCGCTAATTAGAGCTTT 196044 28 100.0 32 ............................ ACTCATAAAGCTCTCTTATACTCATAGTGTTT 195984 28 100.0 32 ............................ AACAAATAAACCTCCTTGACCGTAATTTTTTA 195924 28 100.0 32 ............................ CCGCAAATTTACCTGCCGTAGCAGTAACTACA 195864 28 100.0 32 ............................ ATTCTCAAAGATAAAATAAGGGGTTACTATGG 195804 28 100.0 32 ............................ ATTACTGCGTTGTTGCCAGAAACTCCTAAGTT 195744 28 100.0 32 ............................ ACCTGCAATTCATTTTAAACATTATTGCATTT 195684 28 100.0 32 ............................ TACAAACTCTTTTAGGTGTGATTTTAGTGTAG 195624 28 100.0 32 ............................ TATAGTGAACTGTTGGAAAAACTAGACGATGA 195564 28 100.0 32 ............................ ACAAAACCGCTACTTTTAAAGTCGATGCCTAC 195504 28 100.0 32 ............................ TACTACAATATCTGCGGATATGTTTTTATCAA 195444 28 100.0 32 ............................ TGGTGTATCTACGAAGATGTATTCATAATCTT 195384 28 100.0 32 ............................ AAACCAAACAATAGCACAAGCCAAAGACCATG 195324 28 100.0 32 ............................ ATTATATAAGGCTTCATTTTGAGAATCTTCAA 195264 28 100.0 32 ............................ CATCCTTGGTGCAGTTCGTGGCAAGTTCTTTA 195204 28 100.0 32 ............................ CAACAGCCACAAGAGTCAACGATGATGATACA 195144 28 100.0 32 ............................ TTTAATTTCAGGACAAAATTCAAACGAAGTTA 195084 28 100.0 32 ............................ TATATTAAGTATTCTGAATATTTTTCTCTACA 195024 28 100.0 32 ............................ TGGCCAGCCGGGCTTGTCGTGTTGGAATGGGA 194964 28 100.0 32 ............................ TTATTTTGATAGTGGGTATGTCTCAACTACCC 194904 28 100.0 32 ............................ AATATGATGAAGTTTATGTAGCTGTTAAATCA 194844 28 100.0 32 ............................ ATTACAAACTGAATAGCTGGTGTAGCAACATC 194784 28 100.0 32 ............................ AATAATATCTGAGCCTTTGATACCCTCATTAA 194724 28 100.0 32 ............................ TGAGTATGCATTTGTCTCTTTGTCATAAGTTT 194664 28 100.0 32 ............................ TTTTTCTACATACAAGACATACGAGCTTAATA 194604 28 100.0 32 ............................ ACTAGCTTTTCAAAAGCACTGCTCCAGTTTCC 194544 28 100.0 32 ............................ TCTATCGCTTCGCCGTTTGCTAGCGTGACAAT 194484 28 100.0 32 ............................ TGAATATTCAGCAGATGTTGAAGTTGCAGCAA 194424 28 100.0 32 ............................ AATTTCCTCACAACGACTCAGTTCTTCTCCAA 194364 28 100.0 32 ............................ TATAGAGATACTTCAAAAGAAAGACAATCTTC 194304 28 100.0 32 ............................ TTGAGTATGTAATGGTAACGCAGGGAGAGGAT 194244 28 100.0 32 ............................ ATTTCACAATTCGCACTCTATCCATAGCATAT 194184 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 42 28 100.0 32 GTAAACTGCCGAATAGGCAGCTTAGAAA # Left flank : ATCTTTAAATACACATGAGAGGTTAAAAAATCTTTTAGACTATGTAACAATAAGTGAGATTAAAAAAGTTCCACTTAACATTGGTGAATATGCAACCTTTAGCAGAAAACAGTTTAAATCAAATCCTATAAGATTAGCAAGAAGATATGCTAAAAGGCATGAAAAAACGCTAGAAGAGGCTCTAGATGTTTATAGCGGTATGAGTGCACAAGAGACTAAATTACCATTTGTAATGATGAAAAGTAACTCTTCAAACCAGCAGATGAAGATATTTATAGAAAAAAATATTTGTTTGAAAGAACAAAAAGGTTTATTTAATCCTTATGGCTTAAGCAAAACTTCAACTGTACCATGTTTTTAGTATAAAAACACCTAAATTTTTTCATAGCTTTAAGAACCCCTAAAACAAGTGCTTTGAAGATGCTATGAAAAATAAAGGTTATTTAAGTAAATATATCTCAAATACTCGATATAGTAATGTTTTGAGATATCATTTTGCT # Right flank : TAACCACAATAGCCCAAGCTGTCAAGCGCAATCCAAAAATGTACCAAAACGCAGTGCAAAAGTGCACCACTTCGTAACACTTATTTAACTGAAATATCTAAAAATTTTAATAGTAAACATTATAAATGAAATAAAATACCAAAGAGGGATACTAGATGGTATGACAAAGCTTTTTTAATGAAGATGATATTAGAAAAATCAAAATCGATGCACTTACTGATGAGTCTGTAAATAGATATTTAACAGAGGGTGAGATTTTTAAACGAGAGAGTATTCGTTCATATTTTAGACAAGGTGGAAGTTGTATCTGTTGCAATTGGGTTTGAGAAAGTACGCTATAAATCGGTGCCAGTCTCAAACATAGATAAAGACATTGTAAACTTTTTAGACTACTGTAATAACAGTGATGAAAATATTTATATAAAATGTGCAATAGCCCATCTTTGGTTTGTATCTATCTATTCCTATGATGAAGGAAATGGAAGAATAGCAAGAGCTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [56.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //