Array 1 9823-8418 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWBV01000010.1 Pseudomonas aeruginosa strain ICBBVIM-2 NL27_S27_L001_R1_001__paired__contig_10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9822 28 100.0 32 ............................ AGTGGGCCGAAATCGGCCGATGAGTTCATCGG 9762 28 100.0 32 ............................ GCCCAGGACGATCTACTACTACGGCATCCCGG 9702 28 100.0 32 ............................ TGTCGCAGATCGATCGCGAGGACGCCGATGGC 9642 28 100.0 32 ............................ AGCAGCAGATCATCGACAACGCCCGCGCTTCT 9582 28 100.0 32 ............................ GAGAACGATTCCGTCTTGTTGGAGCTTTCTGT 9522 28 100.0 32 ............................ CGACGAGCAACTGCGCTTGCGCGTGCGTAACC 9462 28 100.0 32 ............................ GGAAGGCTGGCGCTCGAACGGATGTGTACAGG 9402 28 100.0 32 ............................ TCCGGATCACCAGGGCGACAGATGGCCACCTC 9342 28 100.0 33 ............................ CTCTGGCGGTAACCTTCCATGATCTGCGCAGCC 9281 28 100.0 32 ............................ TGCATGCACATCGGCGAACTGCTGACGTGCTT 9221 28 100.0 32 ............................ TGGCGCCGCCCGATTTCACGTAGCTGCTCGAT 9161 28 100.0 32 ............................ TGATATCCAGCTGCTCCAGGAACCACTGGCGG 9101 28 100.0 32 ............................ TGATTTCGAAGGCCGCGGGCGACTGATCCGGA 9041 28 100.0 32 ............................ TGGATCAAAGAACGCATTCTCGGCACGTCGAA 8981 28 100.0 32 ............................ TCCTTGCCGGGCGCGGCGGCGAGCAGTTCGCG 8921 28 100.0 28 ............................ GAGTGTGAGGCCGGGCAAACGGATTTGT 8865 28 100.0 32 ............................ TTGACGGCCAATGCCGGCTTCGACTTAGCTCG 8805 28 100.0 32 ............................ AGCCACTCGCGGGCCAGCTCGGGCGATAGCAC 8745 28 100.0 32 ............................ GTGTCGCCCAGCACCGTTCAGCGCTACTTCAT 8685 28 100.0 32 ............................ TCGATCCACACCCGCGAGGACGTGGCCACCGT 8625 28 100.0 32 ............................ AGCAATGGAAAGCAGCGATGTGACCCGACCCG 8565 28 100.0 32 ............................ TGCAGGTCATAGGCGTATTCGAAGGACAGGCT 8505 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTAGGGCGA 8445 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================= ================== 24 28 98.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTGGGGTGGATTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGTTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTA # Right flank : CGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGGGCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGCTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 51-1159 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWBV01000232.1 Pseudomonas aeruginosa strain ICBBVIM-2 NL27_S27_L001_R1_001__paired__contig_232, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 51 28 100.0 32 ............................ TGCGTAGATGCCGCGATCATAGCGCGCCCTAC 111 28 100.0 32 ............................ TTCGGTACTTCTGAACCATACGTCGCCGCATA 171 28 100.0 32 ............................ AGTCATCGATGAACGACGAGCCGGTCAGTGCC 231 28 100.0 32 ............................ AGAAGCTGGAGCGACGGCTGGCGGCAATTCGT 291 28 100.0 32 ............................ CCGGACGTTCACGCTGGTGGTGAGACCATCCG 351 28 100.0 32 ............................ TGGCTGTCGCTGCGCTGCTGGCCGCTGTGTAT 411 28 100.0 32 ............................ GGCTGGTCCCAGAGCGGGTCGACGGCACGGTC 471 28 100.0 32 ............................ GAACCGCGCGTTCATTGCTGAAGGCCATCGTC 531 28 100.0 33 ............................ ACATCAGCGCCGCGGTAGCCGATGCCGATATCT 592 28 100.0 32 ............................ ACCATCCCCGGCCACGGGTTGCCCGACACCTG 652 28 96.4 32 ........T................... GTTCCATCCGGGTAGGTCACGTCCACGTCGTA 712 28 100.0 32 ............................ TGGAGAGTGACCCGCTCAAGACCGAGGCCGAG 772 28 100.0 32 ............................ TGATGCCGGACATGGGACGTTTCGCGGGAACC 832 28 100.0 32 ............................ CCGGACGCCCCTAATCTGGAGGGCTCCTGGCA 892 28 100.0 32 ............................ TTTCCCCGCGAGGCATAGCAGGGATATCTTGT 952 28 100.0 32 ............................ TACAAGCAGATCGGCGAGCTGAGCGGCAAGGA 1012 28 100.0 32 ............................ TCGTACTGGTCGAGATTTCCGATTCGGAAGCC 1072 28 100.0 32 ............................ TTCGACGCCGCTAGGGTTGCCGCATCGCCGTC 1132 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 19 28 99.8 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : GTGTAGGCAGCTAAGAAATGGGTGTCCAACATCGACGGGTCGAACTGCTCG # Right flank : | # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [38.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 99538-98610 **** Predicted by CRISPRDetect 2.4 *** >NZ_NWBV01000014.1 Pseudomonas aeruginosa strain ICBBVIM-2 NL27_S27_L001_R1_001__paired__contig_14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 99537 28 100.0 32 ............................ GCGAAGAAAAAGCCCGCCAGATAGGCCAGGAA 99477 28 100.0 32 ............................ TGGACGCGGGCGTCCTGGCTGATCAGGCTCCA 99417 28 100.0 32 ............................ CAGCGGGATCAGCGACCAGCCGATGGCCCGCA 99357 28 100.0 32 ............................ GTCGAGGCTGTCCAGCCGCAGCACGCTGCCGC 99297 28 100.0 32 ............................ ATGCCGCCGACCTGGTGCTGGTCGACACGGTG 99237 28 100.0 32 ............................ TTGACGACCAGCCAGAACCTGCGGCCGTTGGC 99177 28 100.0 32 ............................ GAGGAGTCCGAAGACTTGTCCGTGTCGTACCA 99117 28 100.0 32 ............................ AGGAACGTCCCGTCTCAGTTTGGAACGCCCAC 99057 28 100.0 32 ............................ TCGCGGCCCTCGGTCTGCCAGCGGAAGCCATG 98997 28 100.0 32 ............................ TTCATCAGGATGCCGCCAAGGGTCCGCATAAT 98937 28 100.0 32 ............................ ATGAAGGCCAGCAGGCCGAACACGATTGCGAT 98877 28 100.0 32 ............................ TCGAGCAGCGGCCCGAGGAGTCCGAAGACTTG 98817 28 100.0 32 ............................ TGGAGAAAAGCAATGCGAGTGGTGCGAGGCCA 98757 28 96.4 32 ....................T....... AGACAATCCGGACCTGCCGCCCAGGACGATCT 98697 28 100.0 32 ............................ TGCAGCGACTGCACCTTGGCTTGCTGCCGGTC 98637 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGGCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGTCCCCCCTCACTGCCGTGTAGCTAAGAAGTCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //