Array 1 109871-107402 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABEGD010000022.1 Klebsiella variicola isolate k_variicola_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 109870 29 100.0 32 ............................. CAGCGCCTGGGAGGGATTCCGGATCCAGGTTA 109809 29 100.0 32 ............................. TCGACAGCCGTGACCATGATGCGCTGTCGAGA 109748 29 100.0 32 ............................. TTCGATGCTGACCTTAATATTGATTACGGTGA 109687 29 100.0 32 ............................. CATTTCAATAACGCGACAGTGTTCTACTGTTA 109626 29 100.0 32 ............................. AATTGGAGAGGTTTAATGTTCGGGATGCTGAC 109565 29 100.0 32 ............................. TTGGCTTACCCGGGAGATCAGTAACCCGCAGT 109504 29 100.0 32 ............................. GTAGTGAACATCAGAGCCAATGGTGATCTGCA 109443 29 100.0 32 ............................. TCCCGCCTCAACAATCCCCAGCGCATGACCAT 109382 29 100.0 32 ............................. TGTCCTCAATCTCCCACACTCGGCATGCATAT 109321 29 100.0 32 ............................. CGTGGTTTTGAATGGCAAATCGTCTTCTGACG 109260 29 100.0 32 ............................. GCGATAGAAACAGAGGGGTATTTTGGGCGCGG 109199 29 100.0 32 ............................. GGTTCGGCGGCGACGCTAAATCGGCGCAGGCG 109138 29 100.0 32 ............................. TTTTTAAAAAGGCGATAGAAACAGAGGGGTAT 109077 29 100.0 32 ............................. GTATAGAGAACGCCGCACAGCGCATTAACCGT 109016 29 100.0 32 ............................. GTGGTACGCCAGTTGTCCCGCTCCTGCTGCGC 108955 29 100.0 32 ............................. TTCGGCGACGGCTACGAGCAGGTCGCGCCGGA 108894 29 100.0 32 ............................. CATTATCGGGGCCGGTGAAATGCCGCGCCCTC 108833 29 100.0 32 ............................. CCCCATTACGGGAGGTGCTCTTGCCTGATAAC 108772 29 100.0 32 ............................. GTTGAACACTCAGGCGCCCTTGCCGTGAGCTC 108711 29 100.0 32 ............................. GGTTCATCAATCGCTCTCGTTCTGCCCGTTGA 108650 29 100.0 32 ............................. GCGATAGCGAATACTCAACATCGCAATATGAC 108589 29 100.0 32 ............................. CGCTGCCAGTGCAGCGGGACGGGGAAGACACT 108528 29 100.0 32 ............................. ATCGCCGGGGCGCTCAATACCGCCGCACTGGG 108467 29 100.0 32 ............................. CTCGTAGTGGTCAGGAGACAGAGTGATGGCAG 108406 29 100.0 32 ............................. GCGCAGCCGCTGAAAGTATCAGGTACTAAGGC 108345 29 100.0 32 ............................. TAGTAGGGCGGTGAGCCGTCTTGCTGTTCGAA 108284 29 100.0 32 ............................. CTTGAGGGAGTGGATAATTGACTGCACATCCT 108223 29 100.0 32 ............................. GCTCGTTGTTTTCCCGTCGAACGCGCCGGAAA 108162 29 100.0 32 ............................. GACCTCCCATGATTAACGAATATAAAACCGTG 108101 29 100.0 32 ............................. GCGGCACCTGGTCGATAAAAGGTGATGGCGAA 108040 29 100.0 32 ............................. AGCTCCGCATCCGCAGCAGAAACAAATCCAGT 107979 29 100.0 32 ............................. AAATATAATGGGAATTGCCCCGCTCCGGCGGG 107918 29 100.0 32 ............................. CGGGATCGCTGCCACCAAACGGCTGATAATGG 107857 29 100.0 32 ............................. CTCGCCCCAGTCCGGTTTGCTCATCAACTACT 107796 29 100.0 32 ............................. GCGGCAACGCCTCACAGATGCACAAATAAATT 107735 29 100.0 32 ............................. CGAAGACACGCTGGCACAGATTGCCGAGCTAA 107674 29 100.0 32 ............................. CATGTCAGCCCCTCAATGTTATAGCGCTGCTG 107613 29 100.0 32 ............................. TTCAATGCGGCGATAACTTCCTTTAAATCCAC 107552 29 100.0 32 ............................. GGTTGCGACATCGCGCCAGGTATTAATCACGG 107491 29 96.6 32 ............................A TCGACGATGTTCTGCGTGATGGTGATGTATGC 107430 28 82.8 0 ...........AT..-.........G..C | T [107417] ========== ====== ====== ====== ============================= ================================ ================== 41 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGACGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTAGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTGTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTGCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : GCAATTAACAATCAGGCGCCATCTCATAGGCTGTTTGATGGCGCAGGATCAGCACCGCTTGCCACCAGCCCTGCGCCTGAGCTTTTTTGTGTCCTTTTGTCGGCAAAGCATTGGTAAACGCTTGGGCGGCGTCTCTATCCTCAGTTAGCGCAAAATAGGCCAGAGCTTTTGCTACTGGCCCGTGCGCATCAGGCGTCGTGCGAGCAGATTGCGTAGCCTGGCGTCGGCGCTTTCGCGCCCGGCATTTTTCGGCATATTAAGATCAGAAGGAGAAGGTGCCGGGACATATTTATCCACGAAAGCAATGAGCTCATTGACCGTTAGCACCCGTTCGGCAATGTGCGCGACATCCGGCCAGTAATTTTCTTTCGCCTGATACATCAACCACATCGCCTGCAGATAGTCGTCGCGGTTGAGCGCGAGTATCGCCTGCTCGGCGTGAATACGGCAGACCGGCGTCACAAACTCCTCGCTGATAATGTCATCACTAGACTGCTGGA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //