Array 1 56854-47919 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVDQ01000015.1 Shewanella xiamenensis strain ZYW6 scaffold00015, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 56853 29 100.0 32 ............................. TACGATTGCATAGTGCCGCAATGACTAAAGAA 56792 29 100.0 32 ............................. CCATTACCATTGAGTATATTTCAGCCGCTAAA 56731 29 100.0 32 ............................. ATACAAAAGCAGCATGGATACAATCAGCAGCG 56670 29 100.0 32 ............................. CGTTGGTTGAGCTGGCGTTCCGCGTCAACAAG 56609 29 96.6 32 ............................C CATGGTGCGCACGAACTCTTGCAGCAGCTTGC 56548 29 100.0 32 ............................. CGGATTAGCCGCTTCAAAAAGACTCTCAAGCC 56487 29 100.0 32 ............................. TGTAATGCTTTGCTCGATATCGATATCACCGC 56426 29 100.0 32 ............................. CTAATGCTTTTACCGTGGCCAAGATGCTGAAT 56365 29 100.0 32 ............................. TTCGATCTCTATTTCTCGCGACAACGTAGACG 56304 29 100.0 32 ............................. TATCGTTTAACTCGCCTGTGGTGCGGTCAATC 56243 29 100.0 32 ............................. CCAATGCTAATCGCGCGCCGGATGGAACGCGG 56182 29 100.0 32 ............................. AGTGCTGGCTTGCTTAAAGCTGTGTGACTCAT 56121 29 100.0 32 ............................. CCCAGGCTGTGTATGCTTCAATGTATAGGCTG 56060 29 100.0 32 ............................. ATTTGTAATTGATTCAGGAATGGTCGCAACAA 55999 29 100.0 32 ............................. CGCCCGACACAAACAGAAAACCTAGTAAGAGT 55938 29 100.0 32 ............................. CGGAAAACGAGGGAAACCAATCACATCCAAAC 55877 29 100.0 32 ............................. CGTGATGAGGCCTATAAGATGTGCTTTGAGCT 55816 29 100.0 32 ............................. CCTACATAGGCAAAATTATTGAGGTTTCAGCC 55755 29 100.0 32 ............................. CCTTCATTAATTAAAGATTCTCTAATCAGTGA 55694 29 100.0 32 ............................. TTTATATGAAGGTGATCTCGGATGTTTTACAA 55633 29 100.0 32 ............................. CAACTACCAACGCCAACAAGGCATAACTCAAT 55572 29 100.0 32 ............................. TTAGCTTGCTGTATTAACTCCATTGTTAACCC 55511 29 100.0 32 ............................. GATTTGATTTACCGGCTATTGAGGTCGTACAG 55450 29 100.0 32 ............................. GATTTGATTTACCGGCTATTGAGGTCGTACAG 55389 29 100.0 32 ............................. GTCTCTGAAACCGCTAATTTTCTTCATGATTG 55328 29 100.0 32 ............................. TGTGGATAATATATCAGCAACCCGTGATAACT 55267 29 100.0 32 ............................. CGTTACGAAATGTTTAGCTTGATGAAATCTAG 55206 29 100.0 32 ............................. CAGGACTACGAAACGGGTTGGTTCAACGAGTT 55145 29 100.0 32 ............................. ATTCAGCATACGTACAAGGGTTATTTAATTCT 55084 29 100.0 32 ............................. GTGGGAGGTTATCTGGCTGGGTTCTTTTGAAT 55023 29 100.0 32 ............................. GGGTGTGGGGGCTTACTTTGCTGGCGTTCTAG 54962 29 100.0 32 ............................. CGTGACATTATTGCTCAATATTGCTCGCCTCG 54901 29 100.0 32 ............................. CGTAATCACTTGACCATGCTCAGGGCAGAAAA 54840 29 100.0 32 ............................. GCTCCAAAGGCGTCAGCCATTTTTTTACCGTC 54779 29 100.0 32 ............................. GTCACGGCTTTATCTGAAAGTGGCATGTATTC 54718 29 100.0 32 ............................. TTACAAGAGGGTCAGGATGCAAGCTTTGGGCA 54657 29 100.0 32 ............................. CACCTGGCTTACCCGTGCAAAGTTGTAACATT 54596 29 100.0 32 ............................. CACTGAGCTGACCTGAAATGCCGCCTAGATAA 54535 29 100.0 32 ............................. TACTCCCAAATCTTTGAACTATAAGTGCCATA 54474 29 100.0 32 ............................. CTTTGGGGCAGGGTGACGGTGATAATTCTGCT 54413 29 100.0 32 ............................. CATTGCAAATCCTGCGGCATCAACATCATTCA 54352 29 100.0 32 ............................. GCGACTAATAAGGCTGATGAATTTGTGATTGA 54291 29 100.0 32 ............................. TGCCGCGTGACCTGTACGTCAGGCCATGGTAC 54230 29 100.0 32 ............................. CATTTAGGTTGGGAGAATCACCAAGCCGGACG 54169 29 100.0 32 ............................. TGAGCGCATCCACGGCCCAGCGGAACCCACAG 54108 29 100.0 32 ............................. ATTATACAGAGTCTCCTGACGGTGATATTCAG 54047 29 100.0 32 ............................. GCCAATTATCCGGCCAAAATGTGTTTTTAGAT 53986 29 100.0 32 ............................. AAGTCTTGGACGCTGGCATTTGCACAGCATGG 53925 29 100.0 32 ............................. CATTGCTGTAATAAGCCATCATTTTCGATTGA 53864 29 100.0 32 ............................. CATGTATAATTCATATATAGCTGAAAAATCTG 53803 29 100.0 32 ............................. GTGGTGTGCTTGCTGACGGTTCAATCGTGGCC 53742 29 100.0 32 ............................. TCCCTAAAAGACGCAAGCACGGCAGAATCATT 53681 29 100.0 32 ............................. CAATATGCTGATTTGCATACGCAGCAAGAGCG 53620 29 100.0 32 ............................. TAGCACCAAAAACTACCTCAACCTTATCAACA 53559 29 100.0 32 ............................. AACCTGTGACTTTAGCCTCGGTAGGAACACGG 53498 29 100.0 32 ............................. CATCGGTGATCTCAGTAGCATCGTTGAGGGGG 53437 29 100.0 32 ............................. TTTATTCGATTATCAAAACGCGAAATTTACCT 53376 29 100.0 32 ............................. TCCACGCGTGATAACACGAGTACCGCAAAACA 53315 29 100.0 32 ............................. CATGTACTACAAAACAAAAGCCCACATCAGCG 53254 29 96.6 32 ............................T ATGATAAGGCGCATGAAATCGAATTACATGCC 53193 29 100.0 32 ............................. TAAACACGCTCACCGTTGTGGTGCGTGTGGAG 53132 29 100.0 32 ............................. GTTCCTGTGGCTGCATCCCATAGGTTTGTGAG 53071 29 100.0 32 ............................. TCCCATCAACTCAATGTAAGTATTCATATTCA 53010 29 100.0 32 ............................. TCACGGTTGAGCAGCTACTGGCAGACCATGAG 52949 29 100.0 32 ............................. TGGTGGAAATCAAGCAGCGCTATCCTGTTACA 52888 29 100.0 32 ............................. GCACACTATAACGTTCTATATACATAAAAACC 52827 29 100.0 32 ............................. TGTTGCTCACGGGCTGCAAATAACAATTCACC 52766 29 96.6 32 ............................C AATTCCCCTTGGTCAGGATGAGCTTTAAATTC 52705 29 100.0 32 ............................. CTGGTATATCTATCGTCACTACTGTCGAAACT 52644 29 100.0 32 ............................. GCCACCAATAACCTCAAATACGGTTGTTTGAG 52583 29 100.0 32 ............................. CACCTAACGCATCAATCTCAATAGAATCACCA 52522 29 100.0 32 ............................. CCCCGCCCATACCATTGGCCAATACGTCTTAA 52461 29 100.0 32 ............................. AGTGAAGACATCTTTCTGCCAGTTATTCCAAA 52400 29 100.0 32 ............................. TCGGCTAGAGTAGTCTCTAATTGAGTTAACTC 52339 29 100.0 33 ............................. TCCCAATCGGCTATCGACTCTAAAGCCTCCCGC 52277 29 100.0 32 ............................. ATTCGCAGCAAACAGCAGGTTGCGTATCTTCA 52216 29 100.0 32 ............................. TATTCGCTTTATTTTACAATTAATACCATTTG 52155 29 100.0 32 ............................. ATCCCCTGCTGCAAACGGCGCAAACCCAATCG 52094 29 100.0 32 ............................. CAGTAAAATTAACTGTACCAATTAAGCGGCCA 52033 29 100.0 32 ............................. CTATTCTATCCAAGCCCATGATAATCCCGTTA 51972 29 100.0 32 ............................. GTCGCGACATCTGCAGCAGATGCGCCGAGCCA 51911 29 96.6 32 ............................A TAACGCCCGCCAGTATAATACTTTTTAGGAGC 51850 29 100.0 32 ............................. CAAAAACAGTAGAACCAGAAGCAACCAAAGGA 51789 29 100.0 32 ............................. AATGCCGGGTCATCTATCGCTAAAATCTGTTA 51728 29 100.0 32 ............................. GACGTTTGATTTCACCTTTGATGACCGTGACG 51667 29 100.0 32 ............................. GAACTTGGATTTGCAACAGCTGTGGAGCTGGT 51606 29 100.0 32 ............................. TGTAATGTTTGCGGCAACAAGGATAATAGACC 51545 29 100.0 32 ............................. CATATTGGGGAAGAGATACTCAGCAACATTAT 51484 29 100.0 32 ............................. CCCTAAGTTGTGCAAAGGGCTGAGAGTATATT 51423 29 100.0 32 ............................. TTCAATGGCATTATCAAGTTCCATGCGCTTAA 51362 29 100.0 32 ............................. CGATCCAATTCCATTATACCTTATTTGAAATG 51301 29 100.0 32 ............................. TCACCGGTAAAAATACCGTTCAACTTGGTAAG 51240 29 100.0 32 ............................. ATTGAGTACAGTCACACAGTAATGACATTGCA 51179 29 100.0 32 ............................. GTTATACATGATGAAACACTTTTGGGGTTAAG 51118 29 100.0 32 ............................. CTACCGCGAGATCTCCCGAATATCGTGCTCGT 51057 29 100.0 32 ............................. GAATGCGCCCGTTAATACCGTTACCAAATCGA 50996 29 100.0 32 ............................. CGTGATGAAGCCTATAAGATGTGCTTTGAGCT 50935 29 100.0 32 ............................. GCATATAACAGCAATAGAATGCCGCCAATCAT 50874 29 100.0 32 ............................. CCTCGGTATCAGTACGACAGCGTTTGATAAAT 50813 29 100.0 32 ............................. GTAGGCTTAGCCCGTCCTGTTCTTCGGTGTAG 50752 29 100.0 32 ............................. CGCCAGTGCATTGTTCATCGCGAAAACAAATA 50691 29 100.0 32 ............................. GTTTGCGAATAATGTTTGCACCAGCAGGGGCG 50630 29 100.0 32 ............................. CGTATCGAGTCTCTGTTCAACCCCATGACATC 50569 29 96.6 32 .......G..................... CTTATAAAGCCAAATTGACCAAGTTGAATAAG 50508 29 100.0 32 ............................. CTTATAAAGCCAAATTGACCAAGTTGAATAAG 50447 29 100.0 32 ............................. TCAGAGCGCGACGAACTAGGCCGACGATAATA 50386 29 100.0 32 ............................. TTAATTACTACGAGTTGACAACCACAGTGAGC 50325 29 100.0 32 ............................. CTGGCGGACACATCGACCCAACGATGACACGT 50264 29 100.0 32 ............................. GCTCTGGCGCGCGCTGTGGTTATTCAAAACAG 50203 29 100.0 32 ............................. CAGTAAAACTCTTTATTGAAAAACCCGCACTG 50142 29 100.0 32 ............................. ATTCAGAATTGATGACGGTTTCTTTTTCATTA 50081 29 96.6 32 ..............T.............. TGTCATTGTGTCGAACAGTTGCGCCATTCTGT 50020 29 100.0 32 ............................. CGCACGAGTGCCTTAAGTACGCTCAACGACCG 49959 29 100.0 32 ............................. TATGAGCATTTAGTCACGATAGTGATGATATG 49898 29 100.0 32 ............................. AGAGTTATATAAATCTATGGGGTTTGATTTTG 49837 29 100.0 32 ............................. CTTGGGTATTTATATGTAAGTTGGAATGCTGG 49776 29 96.6 32 ............................A TTGGCAGAGGCTATGCCTAGGGCAAAGTTTTC 49715 29 100.0 32 ............................. GTACTGGACTAACCTTAGCAGGGCCTTCGCTG 49654 29 100.0 32 ............................. TAATGTGCTCAATCTTAGCAAGCTCAGCTTCT 49593 29 100.0 32 ............................. GTGGCGGCGAAGCTCCCGTTCGTGAGTGCGAT 49532 29 100.0 32 ............................. CCTGTTATTGCTATAGCTCGTTATATTACTAA 49471 29 100.0 32 ............................. GATATCGTCCAACTTTTCTTGAGCAATTCTAA 49410 29 100.0 32 ............................. TAATCCTGCATCACCATAGGCCGCTGTTAATA 49349 29 100.0 32 ............................. TAATCCTGCATCACCATAGGCCGCTGTTAATA 49288 29 100.0 32 ............................. CACCAAATGCTTACGCAACTGGTGCAACGCTA 49227 29 100.0 32 ............................. GATTTACCGAGTTTATTAACTGAGATAGCAGC 49166 29 100.0 32 ............................. AGCCTATGCCAGTGCTGAGCCAACGGGAGATC 49105 28 96.6 32 ....................-........ TTTTTGCCCACGTTAGGCATTGATCTTCACCG 49045 29 100.0 32 ............................. CAGCCGCTCACCAACCATGGTATCTACACCCA 48984 29 100.0 32 ............................. CATTCACCACATTTCCAGACCACACAATAACA 48923 29 100.0 32 ............................. TACAATTGGATATTCTTGAGCAAGAGGCTTCA 48862 29 100.0 32 ............................. GCATTAGTATGACAAACCGATTTCGGGATGAA 48801 29 100.0 32 ............................. TAAACAAAACTGCGTACAATGTAACCACAGAT 48740 29 100.0 32 ............................. CATGCAGCTGCCAACAGTTTATGAAAAAACTC 48679 29 100.0 32 ............................. GATATAAAAGCAAAAGTGTCAGAGGGTGAGTA 48618 29 100.0 32 ............................. TAGGATTGCATCGTGCCGCAATGGCTAAAGAA 48557 29 100.0 32 ............................. GATGGTAATAACCTTTGCACTTATCACGCTAA 48496 29 100.0 32 ............................. AGCACGTGATACTTGTTCGTCACTTGCGTCTA 48435 29 100.0 32 ............................. CCGGTGCCTAATGTTGGGCTGGCAATCAATAC 48374 29 100.0 32 ............................. TAATGACTGTAACCCGCCCAAATAATCGGGGC 48313 29 100.0 32 ............................. TGTCATTGCTTAACGCCAGTGAGCAATTAGCC 48252 29 96.6 32 C............................ AGTCAGGCGGGGACGTGTTTAGCAATCTCGAA 48191 29 100.0 32 ............................. CAAATTCAATAGATTCAATGGATTCTTCGACA 48130 29 100.0 32 ............................. CGATAGGAGTTGTAAAGCCATAAGGCCAAAGA 48069 29 100.0 32 ............................. ATTAACTCCTGCTTTAGTTGCAAACGTTGCCA 48008 29 96.6 32 ...........................T. CGAGCGAGTAATGCCGATCTTCGTCCAACCTT 47947 29 89.7 0 ........T.........A..G....... | ========== ====== ====== ====== ============================= ================================= ================== 147 29 99.7 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : GAAGATGTGCTTGCCGGTGGCGAAATAGAACCGCCAGCGCCTCCTGAGTATGTTCAACCACCAGCTATTCCTGAACCAGAATCTATCGGTGATACAGGTCACAGAAGTAAGTGACAAGGATCGAACATGAGTATGTTAATGGTAGTAACTGAAGCAGTACCACCCAGACTCAGGGGGCGGCTTGCTGTCTGGTTATTAGAAGTGCGTGCCGGCGTTTATGTTGGAGATGTATCACGTAGTATCCGAGAGATGATTTGGTATCAAATAACGGAGTTAGCCGAAGATGGTAATGTAGTCATGGCTTGGGCAACCAATACTGAATCAGGTTTCGATTTTCAAACCTATGGCGAAAATCGCCGTGAACCAATCGATCTAGATGGATTGCGACTGGTGAAATTTAAACCTTCACTTGAACAAAAATAGCAAGATTAGCTCTTTAAAAATCTGGTAGAATTTTTGAGCTTTAAAAATAGTTTAGGAAACAAAGATCTATATTTAGA # Right flank : CCTTTATTTATTTAGGCATTTCTTCAATTGTCTTTTTAGTGCTTTGTGTATCGGGTCAGTAGGTATACGGCCAACATAACCAAATCCTTTTTTTCGCTCAGTTTTAGAAAACACCCTCATTTCATGTGTTAATTCTGCATCAGATCCGCTTAATCGATGGAAGTAAGGGGTCGGGAATACTGCCGAGTAGATATGGAATTTGAGGTGTTCAGCAGTGGTATCTTTATAGTAATGATCCAGTGCGGACTGGATAATCATAAGCGCCTCTGCACCAGCATATTCAGCGATATAGTATTTTACGCTTTCTAACTCAAATCGATATTGACGAACGATCTCGATAACTTCACCTAAGCTATGAGTTTGCATTTCACTTAGCTCTATCAATCGCCAATAGGCGTTGAGAGCGTTTTCTATGTCTATCTGTTTTATTTTTAGATCAAGGCGTTTATAGAAATGCCACATGAAAGCATTAACAAGTGCATTCACTCGTACGACTAATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //