Array 1 27469-28296 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDJY01000006.1 Malaciobacter halophilus strain F166-45 NODE_6_length_97615_cov_31.8903_ID_2771, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27469 36 100.0 30 .................................... AAAAAATGATTGGGTTAGATAATTTAAAGC 27535 36 100.0 30 .................................... ATGGACATTTTGGTTATGATCTAAGTCCAT 27601 36 100.0 30 .................................... TAGTTACTGGATTACTAGCCAAATGGTCTA 27667 36 100.0 30 .................................... TTTAGTTAAGCAAATAAACTATATTGATAA 27733 36 100.0 30 .................................... TTTAGTTAAGCAAATAAACTATATTGATAA 27799 36 100.0 30 .................................... GACTTAAAATTAAGTATGGGTCAAGCAGTT 27865 36 100.0 30 .................................... AAACTATTATAGATGTAAAGTGCTAAGTCT 27931 36 100.0 30 .................................... GTGACAATGTGATGGGACATGACGGTGCTG 27997 36 100.0 30 .................................... ATTAAATTTGAGTCAAAATCAAGTTCATTA 28063 36 100.0 30 .................................... TATTCATAACCTGCAAATTCTTCAATTATT 28129 36 100.0 30 .................................... AAAGACGAATGCACTGATAAGCATATTGCA 28195 36 100.0 30 .................................... ACTTATGTTCAATAAGAAATTTTAGTATAT 28261 36 88.9 0 .........................A...T...T.T | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 99.1 30 ATTATAGCATATTTGTGTGGGAACAGGCGCTATAAC # Left flank : GTTGAACAAAGATTTATGAGACTTTTTGTATTTTTTGATTTACCTACAAACACAAAAAAACAAAGACATCATGCTACAAAATTTAGAAATCTACTTATTAAAGAAGCTTTTACTATGCTTCAATATTCTGTTTATATTAGAGTTTGCAAAGGCCAAGAAATAGTGAATAAATACATTGATATTATAGAAAATAATTTACCTAGTGAAGGGAACATAAGAGTTTTACAAATAACAGATAAGCAATATGAACGAATGAAAATTCTAATTGGTGAAGAAACATCAGAAGAAAAAAGTGTAGGAATGAAACAACTTTTACTTTTTTAATTTTATAATAAAAAACCTATCAAAAAAAGATTATATTCATCATCGTATTTGTTAAAAAAATAGTATATTTTTAACAAAAAAAACTAATAAAACTTATGAAATTATACTTAATTCATATCTTTTTTATCTAAGATAACTTATACCAAGCCCACTATTCCATGGACTTAATAAAAGGT # Right flank : TCTAAAGTAAAATAATTTATCCAGTAAAAATTATTAAATAAAGACAAGATTTCTAATTATTAAAAATATATAAACTAAATAACTCACTTAAAGGCTCAAACAAAACATCTTTTGCTTCTTGAAACTCAATATCATTTTCAAAACATAGTTCTAAAAGATGGCTTTGAATATTTTTAGTTTTATCTATTTTTCGTAAAAGATAAAATATCACTGGGTTTATTTGTCTATACTTAACCTCATCATCTTTAAAATCATAATAAATAATTGCATAATTCTCTTCTTTTTTTTCTATATTTGCATTTAAAATATCATAGTTAAATTTCTTAAGTCTTGCACTATTTGAAAGTTTATAGCTATTTTCATAATGAAACTCTTTTAACTCTTCTATTTTGTACTCTTGCATGGCTAATTCAATCTCAATCCAGTCAAAGTATAAAAGTTCATAAAGATATTTTCTATCATGAAATAGTCTATTTTTTTTTACAAACTTTCTATAATCA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATAGCATATTTGTGTGGGAACAGGCGCTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 62676-56590 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDJY01000002.1 Malaciobacter halophilus strain F166-45 NODE_2_length_153511_cov_29.1195_ID_2763, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 62675 30 100.0 35 .............................. AATGGCAAGTATTAGACCTTATAGTGGTGTGATAC 62610 30 100.0 36 .............................. CAAGTTTATAACGAAAAGAAACAATTACAAGCTTTT 62544 30 100.0 36 .............................. CGAGTAGAATTGATAGAAGAAAAAACAAAAGAGCAC 62478 30 100.0 35 .............................. CTGGACTAAAGTCAATTGAACTTACAACACTTCCC 62413 30 100.0 34 .............................. AAACTACTAAAAACGGGTGCTATTATTTCACTTC 62349 30 100.0 35 .............................. GAAACTGCAAAGTAATAGAAAATAAAATATTAGCT 62284 30 100.0 34 .............................. TAATTATTAATCATTCCACAAAGTAGAAGAACTC 62220 30 100.0 36 .............................. TTGTAATTGCATCTCTCTCCTGTTCATTTTCAATAG 62154 30 100.0 36 .............................. TTTAATATTCTAAACTTTTCTTTAACCCATATATCT 62088 30 100.0 34 .............................. ATGGTTCAAGTGCGGACGCTTTTAGCCGTTCTTT 62024 30 100.0 36 .............................. ACATAAAAAAGGAGTACTCAAAAATGAGTCAAAAAA 61958 30 100.0 34 .............................. TGTCAAAATCTTTCAAATTATGACTTACTACATA 61894 30 100.0 34 .............................. AGTGTTTTATAACTTTATTTAAGAAATTTCTTTA 61830 30 100.0 37 .............................. GTTCCAACATCGGTACGCTTAATCCATTGTTTATTTT 61763 30 100.0 36 .............................. AGAGATGCCTTTAAAACTGGGGGTTATGGAAAATGG 61697 30 100.0 35 .............................. TTATCTCCAGTAGCATTTAAGCCTTGAACTGATTC 61632 30 100.0 35 .............................. TTAGCTTTTCATAAGGGTAAAACTCTTCCCATAAT 61567 30 100.0 35 .............................. TAACATTAATCCTTTACTGCACTTATTTTTTTATT 61502 30 100.0 34 .............................. TAGCAAGTATTTTCTTTGTATTTACCCCAACAAG 61438 30 100.0 35 .............................. CAGCAAGAATCCTCCTTATACTCGTCCCAATAATT 61373 30 100.0 34 .............................. CTGGTGGAACTACTAGTAAAGCACTTGTGGATGA 61309 30 100.0 35 .............................. TCTATTTGTAAACTCATTTCTGCATAATCTTTTAT 61244 30 100.0 34 .............................. AGTTGAGGATTAAATACTAATACACAGAAGCCAC 61180 30 100.0 36 .............................. AATGCAAATCAAAAAGGCAAAGTTCACCCAACCCAA 61114 30 100.0 36 .............................. GGTGACAATGTGATGGGACACGACGGCGCTGTTATG 61048 30 100.0 37 .............................. ACGATAGGCGGGATTATTGGTAAAATTTTAGCCTTAG 60981 30 100.0 35 .............................. GCAGATACAATTGATGCAGGAAACATTACATCAAC 60916 30 100.0 36 .............................. TCTAATAACGCTTTACAATCTTTTAATCTTGCAAGT 60850 30 100.0 34 .............................. AACAAAAAAAATGACAATAGTGCAAAAGCGCAAG 60786 30 100.0 34 .............................. AACAATGTGAGCCACGGGCGAACACCTTTTCAGT 60722 30 100.0 37 .............................. AACGCAGAAAATGCTATCTCTAAATCTTTAGATAATC 60655 30 100.0 36 .............................. TTGCTTCTGCTTTTTCTTCATCTTTCATTTCTCCCA 60589 30 100.0 36 .............................. GTGCTTGTTGTAGTTGCTTTTCCAAAATCAGCACCC 60523 30 100.0 35 .............................. AAAGGCTAAAGAAGAAGCAAAGGACGAAGCAAAAA 60458 30 100.0 36 .............................. TCTTATCCCCTTTTGTTGTTTTATAAATATATTATA 60392 30 100.0 35 .............................. GACTTTAAGAAAATATTTAAAGAAATTAAAACAGC 60327 30 100.0 34 .............................. GCTTTTGCTTATACAAATTGTACGTTAATATTTT 60263 30 100.0 37 .............................. AAAAGTAGGCTTAGACTTGTATGGTCAGTTTGGCGGA 60196 30 100.0 35 .............................. CAAATTGACAAAAGCGGATTTAGCTTTAGTGCTGA 60131 30 100.0 35 .............................. TGTAGACTCCATACCCAATTAATAAAATTTCTTGC 60066 30 100.0 35 .............................. TTATATAAGATATTGATATTTGTATATTGTCATAA 60001 30 100.0 34 .............................. GAATGCAAACAGATGAACAAAAAAGAGCATTAAC 59937 30 100.0 34 .............................. TTAGATTTCTTTTTTATTCTTACTTATTACATAG 59873 30 100.0 34 .............................. GAATGGAATAAAATAAGCTAATGCAAACTAGTCT 59809 30 100.0 35 .............................. CGCGCTTTATAGTCCAAGTTCTCAAAAGAGAATTG 59744 30 100.0 34 .............................. AATGCTGCAAAAGATTATATAGATGCAGAAAAAA 59680 30 100.0 34 .............................. ATTAAATTATTTCCATATAAAAAAGTTTTATCTA 59616 30 100.0 36 .............................. GCAATTTCTATTAAACCATAGCCGCCTTTTTCTCTC 59550 30 100.0 35 .............................. CCATTAACTACTACTCTTTGAGTTATTTGAAATTC 59485 30 100.0 35 .............................. AGGGGTGCGACTGCTTTTCATGATGGTGTAAGAGC 59420 30 100.0 34 .............................. ACGCCTGTAAGATTCTTTTTTACTCTTTTATCAT 59356 30 100.0 36 .............................. GATATTAAAAAAAGTCAAATTGCACAAATAAAAGCA 59290 30 100.0 35 .............................. TTTATAGTCTTGTTGTCTTTCTTCTTTTTCAATTA 59225 30 100.0 37 .............................. TTCATTTGATTTATAAATAGTATTATTACATCTCTTG 59158 30 100.0 35 .............................. GTCCAAACAATCGCTTGAACTTCTTCTTTTGTTGT 59093 30 100.0 35 .............................. GATATTAAAAAAAGTCAAATTGCACAAATAAAAGC 59028 30 100.0 38 .............................. TAAAAAATACTTGTATCAACTTTTTTGCCATTGGTTAC 58960 30 100.0 36 .............................. AGAGACTAAGACTTGAGTCCAGTAGTGCTGGTGTAA 58894 30 100.0 34 .............................. ACTAATATTATATAGTTATATATTTCTAAGTTTA 58830 30 100.0 35 .............................. GACAATACGAGCGATAATGTATTTTATTATGCAAT 58765 30 100.0 36 .............................. GAACGCTAAACAACTTGAAACTAACTTACAAATAGG 58699 30 100.0 36 .............................. GAACGCTAAACAACTTGAAACTAACTTACAAATAGG 58633 30 100.0 36 .............................. AGGTTAATAGTTGATAGGCTAATTGTTGACATAATT 58567 30 100.0 37 .............................. TGGAGAAATGACGATTTAACTAAATTGTCTGATACAA 58500 30 100.0 36 .............................. TGTTTTCTAGCTTTATTTTTTTGTGCTGGAATTGAA 58434 30 100.0 35 .............................. TAGCTAAGTCCATCTCCTGTAAAAGTTGCATCAAG 58369 30 100.0 36 .............................. CTTAAAATACTCTAAAAATACTAAAATTTACAAAAC 58303 30 100.0 35 .............................. GCGCTAAAAATAAGAACATCCCTTCCGCTACAATT 58238 30 100.0 34 .............................. CAACACTACCAACGGACACTAAAAATAATACTGA 58174 30 100.0 37 .............................. TAGCAAGTGTGTATCCCCTCTACAAGAGGAGTATTAC 58107 30 100.0 36 .............................. TAGTCATAACTTCGTTGTGGCTTAGTTACTGGATTA 58041 30 100.0 36 .............................. ATCACAAATACGAATTTAAAGAGTGTCAATGGATTT 57975 30 100.0 35 .............................. TACATGGTTAGCCTTGTTGAGAATCTTCATAAATT 57910 30 100.0 35 .............................. AAAGAAGATTTAATCCAAGCTTCAATTTCTATAAC 57845 30 100.0 34 .............................. TAATCCTTTTAGAGGAATGAAAGACATGAAGAGA 57781 30 100.0 35 .............................. GTCTTGAAAGTACAGTAAACATAAAAAATGATAGT 57716 30 100.0 36 .............................. CTTGTTATAGTTTCACTTGTTCCCAACACTTGTAAT 57650 30 100.0 35 .............................. TCGTTTAACAATGGCTCTTCTATGCTTTCCAACTG 57585 30 100.0 35 .............................. TAAGTTTGATTAACTAAATATAGTGACGGGAAAAA 57520 30 100.0 36 .............................. CTTGAAAGCATTAAAAACAATGTTGTTTCACTTGAA 57454 30 100.0 35 .............................. CTAGCAGTTCCATTTTTTATTTTATCTTCAATGTT 57389 30 100.0 34 .............................. TCTTATTGTAACAGATAATGAAATTCTACAAATA 57325 30 100.0 36 .............................. CTTGAAAGCATTAAAAACAATGTTGTTTCACTTGAA 57259 30 100.0 35 .............................. CTAGCAGTTCCATTTTTTATTTTATCTTCAATGTT 57194 30 100.0 34 .............................. TCTTATTGTAACAGATAATGAAATTCTACAAATA 57130 30 100.0 36 .............................. CTTGAAAGCATTAAAAACAATGTTGTTTCACTTGAA 57064 30 100.0 35 .............................. CTAGCAGTTCCATTTTTTATTTTATCTTCAATGTT 56999 30 100.0 36 .............................. GTAAATAATATTAAATGGTAAAGAGGTTATCTTAAA 56933 30 100.0 35 .............................. TCGCTTCTAATTCTTCATTTTCCATGATATATATC 56868 30 100.0 36 .............................. AAAGTTATCGTTTCAAATGATGAAGCAGAACAGTTT 56802 30 100.0 35 .............................. CTTGGGGTAAGGTTACTGTTGACTTAGTTGACGGT 56737 30 100.0 38 .............................. AGGCTTATGTGGTGCGACCTAAAATATGTGGTCAGAGT 56669 30 100.0 20 .............................. GCACCTCTTAAATCAACACC Deletion [56620] 56619 30 76.7 0 AC.......C..T....A......A....A | ========== ====== ====== ====== ============================== ====================================== ================== 94 30 99.8 35 CTTGAACCAAAACATATGATGTATTGAAAT # Left flank : TAAAATTTAAGGACTTTAATGGCTACTAAAAAACAAAATTATAATTATAACTACATATTTTTATTTTATGATATTGCAGATGAGTTTAGCGAAGTAGGTAAGTATAGAGTATCAAGAGTCTTTAAAATATGTAAGCAGTATCTAAAACATCATCAAAAATCAATCTTTAGGGGAAACATAACTCCATCAGATCAAATTATGCTTGAAAACAAACTTAGAAAAGTAATAGATAAGGATTTGGATTTTATCTCTATCATAAAGGTACAAAATTCAGGAAGTTTTACAGAACTTACTATTGGAAATGATAAAAAAGAGTCAGAATCTATTTTTATATAATTTTTCCAAGCTACTTAAAAATAATATCATCTAAAAATAGCTATAATAAGGCACTTTTAAAAAGTTATTTCACAACTTATTGTTTTAAAATAATCAGTTGGAAAAACTTCTTAAAAGAACCAATTAAAGGGAAAGTGTATTTTAGAAGTGCCTAAAACATCTTC # Right flank : TGACCCGAATGAATTCGGGTTTTTGAAAATGGAGCTTTGAATTGAAGCATATGGTATGAAATGACCCGAATGAATTTGGGTTTCCGAAAATTGGGTTTTGATTAAATATAAGTTAAGAAAAACTTATAATAGACTCTTTTAAATAGATTAAAAAAACTTTTACTTATAATACGCAAAAATTATGTATTTAAGGTAAATAATGATTAAAAAGATTGATATGAACTCTACTGAATTTCAAACTCAGTTTGAATTGACAAAGCAGTTTACAGACAAAGTTTTAGATAGGTTTGGTTTTGTTTATAATCCTGAAAATGATGTAAATGAATCTGTTCAGCAAGGGCTTAGTAGAAATAAGATGATATATGGAAAAAGATTCTGTCCTTGTTTTATGGTAATAGGTCAAACAAAGCAAGAACAAAAAGAAGCAGATAATAGACTTTGCCCATGTAAACCTGCACTTGAAGTTGAGATACCAAGGGATGGAAAGTGCCACTGTGGGA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCAAAACATATGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //