Array 1 949598-955730 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR778301.1 Denitratisoma oestradiolicum strain DSM 16959 chromosome I Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 949598 29 100.0 32 ............................. CAGTAGAGGCTCATTCCGGAGCCGTCTATCTC 949659 29 100.0 32 ............................. ACATCGAACGCCACGCTATGCGCCGCCATTGA 949720 29 100.0 32 ............................. TACGATGGGACAACGCCGAGGGAGGCGCAAGG 949781 29 100.0 32 ............................. CGGGAACGCGGGGAACTGGCGGCGGAACGGCT 949842 29 100.0 32 ............................. CCAGCCGAGCAATTTCCCGTAGGGTTCGCTCA 949903 29 100.0 32 ............................. AATTATCAGCAGTCCGCAGCGATCTCTGCTGA 949964 29 100.0 32 ............................. CCCCATATCAGCGCGTATTACGAATGGTTGTT 950025 29 100.0 32 ............................. TCTCGCCGAATCAGCGCATGGAATTTGTACCC 950086 29 100.0 32 ............................. GCAACTTCCGTGCGCTACAGGAGGCTGCATGA 950147 29 100.0 32 ............................. CATCGACATGACCACCGTCTACCCCTCCCGGG 950208 29 100.0 32 ............................. CCCCGCCAGCGGCTGCGGTGCCAGAAGGCTGG 950269 29 100.0 32 ............................. TCCTCATTGGCCGGGCGGCTGGTGCCGATGTC 950330 29 100.0 32 ............................. CGAAATACAGAAAAACGTCAATGGTGCCCCCG 950391 29 100.0 32 ............................. TCCGCAATGATGGCCGGGTCGGACGTTGGCAG 950452 29 100.0 32 ............................. ATCACGGCCAGGGCACCGGCCCCCATCAGGGT 950513 29 100.0 32 ............................. GCCTGAAGGCTGAAAATGGCGAGGTCGAAAAA 950574 29 100.0 33 ............................. GGCACTGGTGAAGTGAAACGTCGGTATCGGTGC 950636 29 100.0 32 ............................. GACGGGCGCATTGTGAAATTGATGGATGATGT 950697 29 100.0 32 ............................. CCATGTTGCAGGAATTGCAGGCCGCCAACGAT 950758 29 100.0 32 ............................. CATCCTGCCGAGTGCGCCAATATCGGCCCCAC 950819 29 100.0 32 ............................. CGGACCATCACACAGGAGGCCCACCATGCAAC 950880 29 100.0 32 ............................. GAATGGATCGGCCCGGCAGGGCCGCGCCAACT 950941 29 100.0 32 ............................. AAATCCGCCGTTCTAGATGAGGGCGGGGTAGT 951002 29 100.0 32 ............................. CAACTTGGGGTTAAGCCGTCACCGGAGGCGAT 951063 29 100.0 32 ............................. TACTGCCCCGCCGTGTAGGTTCCCGCGGTGTC 951124 29 100.0 32 ............................. GCCGTGGAGCGCAAACAAAGCGTGAAACCGGC 951185 29 100.0 32 ............................. CTCGCCGGACGATCAGCCATGTGAAAACTGGC 951246 29 100.0 33 ............................. ATTATAAATGGATGGATTCGTGTTCCTGGGTAT 951308 29 100.0 32 ............................. CATCTGCATGAGAATCTGGGAATGGGCATCAC 951369 29 100.0 32 ............................. ATTATCCAGATCGCCGACGAAGAGGTTACGGT 951430 29 100.0 32 ............................. TCAGCGGCGCCGGCACGGCGTCCGCTGGACTG 951491 29 100.0 32 ............................. TCCCCGCGCCATTCGAGGCGCCCGCCCCATAG 951552 29 100.0 32 ............................. ACGACGCGATAAATGGCGGCAATGCCCAGTAC 951613 29 100.0 32 ............................. CAGTTCCGCCAGCGTTATTTCTGAAGGCATAG 951674 29 100.0 32 ............................. GCGGAGCGCGAAGACATGGTGGCGCTACAGGC 951735 29 100.0 32 ............................. TGACATTGAGAGAGTTCACCGATAAGGATGGA 951796 29 100.0 32 ............................. TTCGAACGGCGCAGCTAACGCATTACACACCA 951857 29 100.0 32 ............................. TATCTGCCGGAGTTCAAAGAACGAAAGCTCCG 951918 29 100.0 32 ............................. GTTTATGCCATGGGGCCGAATCCGAATCCACC 951979 29 100.0 32 ............................. CCTTCCTTTTCCAGCTTCTTGGCAATGGCCTT 952040 29 100.0 32 ............................. TTATCGGCGATTCTTCCATCGCTTCGGGATTG 952101 29 100.0 32 ............................. GCGTTCCAAGGGAGGAATTTTGGATCGAGCCC 952162 29 100.0 32 ............................. GTTTCCCAACAGGTCCAGTTGCTCGGCGTTCG 952223 29 96.6 32 ............................A TCGCGGCGGCGCTGCGCGACGCGGATTACCAC 952284 29 100.0 32 ............................. GAGGCGAGGCTATGAATTTCGCGGACGAACTA 952345 29 100.0 32 ............................. GCCAGATTCGGATGGCTACCACGGCTCAGGTA 952406 29 100.0 32 ............................. ATTGTTGCAGCAAACTCAAACTGTTGGAGGTC 952467 29 100.0 32 ............................. GTGGTGCCCTTCTTGGGTCTCAACCTTCGGAT 952528 29 100.0 32 ............................. GCTTGGGCGGTGCGCAGAATTGAGGAGGGAAA 952589 29 100.0 32 ............................. ATCAGGATCGGGGCGCCAGATACTCCAGCGTT 952650 29 100.0 32 ............................. AAACAGGCGCTCTTTCCTGGCTGCGGCAGGCC 952711 29 100.0 32 ............................. CATCTGCATGAGAATCTGGGAATGAGCATCAC 952772 29 100.0 33 ............................. CATTGCAGGCTCCGAACCTGCGCTGATCGAATC 952834 29 100.0 32 ............................. CGTTACATCCGCGCCGTTTCCACCGTTTCCGG 952895 29 100.0 32 ............................. AGAGAGCCGACCTGCTGAAAACCCTGGAACAG 952956 29 100.0 32 ............................. GCGGCAGCTACCGGAGCGGCGATGGGGGCGAC 953017 29 100.0 32 ............................. GATTTTGAGGACTTCAGGTCGAGATACCTGAC 953078 29 100.0 32 ............................. AAATCTACGCGATCAAATGTTTTCCTGAACAT 953139 29 100.0 32 ............................. GCGGCTATCGAGTGGGCGGAATCTCTGCCGGA 953200 29 100.0 32 ............................. GCGCTTCGTAGAAAACTGATCGTCGTCGGCGC 953261 29 100.0 32 ............................. GCGGATACACCGGGGTTCCGTCTGGTTTCTAC 953322 29 100.0 32 ............................. AGTTGCATGATTCCTAGCCATCACTTGATCCC 953383 29 100.0 32 ............................. CCGCCCCACCTCAGGCGCCTGGACCTCGAAAC 953444 29 100.0 32 ............................. ACCACATTCACCAGCGCGGCAACGATCAAATC 953505 29 100.0 32 ............................. GCTGCCCGTTCCCGAATATGGCTGATGGACCA 953566 29 100.0 32 ............................. ACAGTCTCCGCACTGCTCGCAGGTGGCTACGT 953627 29 100.0 32 ............................. CTCTTCCAGGGCCTGCGCAACGGTTCCGTCAG 953688 29 100.0 33 ............................. CAGGTTCCGAAAAACAAAGGCGACAACATCAGC 953750 29 100.0 32 ............................. CCAGAGAGCTTTGCCGTTGTTGTACCACCAGT 953811 29 100.0 32 ............................. CTCCTCTTTGATGATCAGCTTGACTACCCCGC 953872 29 100.0 32 ............................. GTGGCGGCGTATTTCAGGGCAGAATCCATGTC 953933 29 100.0 32 ............................. GCGTCCGGGTTGAATGACGGGTTATGTTTCAT 953994 29 100.0 32 ............................. CCAGAATCAACGCTCTATACCGTCACTGGGTA 954055 29 100.0 32 ............................. TTGACCCGGGCAGGGAATATGACGGCGTGGGC 954116 29 100.0 32 ............................. CCTACATTTTCACAGATTGGCGCATGTGGGTT 954177 29 100.0 32 ............................. GGATCTGGCCGAGAGGTGAGCGTCGAGCAACT 954238 29 100.0 32 ............................. GGCGGGATGAATCCGCTGGGGCTTGTGGCTGC 954299 29 100.0 32 ............................. TGACATTGAGAGAGTTCACCGATAAGGATGGA 954360 29 100.0 32 ............................. TTCGAACGGCGCAGCTAACGCATTACACACCA 954421 29 100.0 32 ............................. ATGCGTGGCGGACAAGAACAACCCCAACAGCA 954482 29 100.0 32 ............................. GATGCGCTCATGGCCGCGGCAGAGATCCTCTC 954543 29 100.0 32 ............................. CTTTTGCTGCGCATTCGGAGCTTTCGACACCA 954604 29 100.0 32 ............................. TGTGGGCGGTGATTCGGGCGAGGCACCCGGAA 954665 29 100.0 32 ............................. AGGCTGAGAATGTCTTTAATTCTCTAATCCCA 954726 29 100.0 32 ............................. CTTCTTCAGCCCTGCAGAGATGGCCGTTACCT 954787 29 100.0 32 ............................. TAACCTCGTACAAGAAGCTGATCAGAGACCAC 954848 29 100.0 32 ............................. AATCGCAGAGTCCCGCCGACCGGGATGTTCAC 954909 29 100.0 32 ............................. CTCATTTGCCTGGCCGATGGTCCAATGCAGAG 954970 29 100.0 32 ............................. TGTCCGGCGATTTTTTGAGAATCAAACTCGCC 955031 29 100.0 32 ............................. GCCGCGACCCAGAACTGGGTCGACTTCATGAC 955092 29 100.0 32 ............................. ACATTCTGAACAGGCTCCGGAGTCCACATAGC 955153 29 100.0 32 ............................. GGGACCTGATATGCCAACCATTATTCTCCATG 955214 29 100.0 32 ............................. AAAATGAACTGGATCAATCGACTGAAGGAGCC 955275 29 100.0 32 ............................. CCCGCCGCCGGGCAGTACAAGGTGCTGGCCAC 955336 29 100.0 32 ............................. ATGTTGAGTGCCCGCTGGAACCACAACGCCGC 955397 29 96.6 32 .A........................... CATGGGCACAGCTACCGGCGTGGCCAGCCCGA 955458 29 100.0 32 ............................. GTGGACAGCGCTTTGCGGGCGACGGTGTTGGT 955519 29 100.0 32 ............................. GCGAGTTTGTGCAGCTTCGGAAATCCACGGCA 955580 29 100.0 32 ............................. TCCATCACCAGATGGGTGGCATCCGTCACCAG 955641 29 100.0 32 ............................. ACCAGCCCCACCGATGCCGTGCGCGCTCCCCG 955702 29 86.2 0 ............C..........A...TT | ========== ====== ====== ====== ============================= ================================= ================== 101 29 99.8 32 GTGTTCCCCGCATGCGCGGGGATGAACCG # Left flank : CCTGCTGGAACGCATCATTCCCGCCATTGAGGAAATGTTGTCCGCTGGAGGAATCGAACCGCCCCAAGCCGCCCCGGAACAGGTCGGTCCTGCCATTCCTGAACCCAAGCCCATTGGCGATGCTGGTCATCGTTCTTGAAAACGCGCCGCCACGGCTGCGGGGAAGGTTGGCCGTCTGGCTGCTTGAAGTCCGGGCCGGGGTCTATATCGGCAACTATTCCGCCAAGGTGCGTGAGCACATCTGGACACACGTAGAGGCGGGCATCGGCGAAGGCAATGCGGTCATGGCCTGGCGTGCCAATAATGAAGCGGGTTTCGACTTTCTGACGCTGGGAGCCAATCGCCGAGTTCCACTGGAACTGGACGGCGCCAAACTGGTTTCGTTTCTCCCACTTGAGGACAGTCTGAAAGCTCCTTAACAACCTGGACTTTGGAATAAAGGAGTCGGTAGAATCCGACGCCTTGTTTTTCCTGTACGGAATCAATTACGTACGGGAAGT # Right flank : TTCAATGCAGAGACCGAGTGTGTAACCATCTGGGTTGAGAGAGTACGACGATTCCCTTTTCCCCTGATGAAATTTCCCTCATGGGCTGATCTGCTTGGGCACGACTCGTCCAGAATGCAGCCACACACATTCAAAAGGTCGACGAGCGATGAACTGGCGGGGATGGGAGGAATTTCAGTCGCTGATGCGAAGGGAAATGCTCCATCTGGCGACGATCAACGCCAGTGACCGGCGCTGGCAGATGCCGTTCTGCGCGGCTCTTGCCACGGGCCTGCCGCTTCTGGTCGGGGCTTATTTCGATCACATGGATTACGGACTTGTTTCGTCCCTGGGTGGGCTGGTGTTTCTCTATGCGCCCAACACGCCGCTGTCCCATCGCATGGTGTCGCTGATGGCATCCGCCTTCGGCATGAGCGCCTGCTATGCCCTGGGGGTGATGGGGCACTTTTTCCCGGTACTGCTGGTACCCGTGCTGGCCTTTATCGCCATTCTGGTTTCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //