Array 1 5061-3628 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOCG01000418.1 Lactobacillus nasalidis strain YZ01 sequence418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5060 29 100.0 32 ............................. CTCCATGTCGTCCTCCTGTACCATTATGGTAC 4999 29 100.0 32 ............................. GTCACGGTAGAGCTCACTCCGTTGCTCCCGAT 4938 29 100.0 32 ............................. ACGCCGCTGAAATCATCACCGAGCAACTTCAA 4877 29 100.0 32 ............................. ATGCTCCTTTTGAGCCTGAACCCAGCGATTGA 4816 29 100.0 32 ............................. ACCCCCCGTACCACTGTGTTAGTGTGCTAGCA 4755 29 100.0 32 ............................. GTCTCTGTCCATGGCTGCAGCGGCTAGTGCAA 4694 29 96.6 32 ............................C AGGTTAGTCTCAAACTTTTGCGTCTGTGGTTT 4633 29 100.0 32 ............................. CATCATCGTTATCACCCCATAAGTAAAAGCCA 4572 29 100.0 32 ............................. GTCATTAGTCATTTTTTGCATCCCCCTTAACT 4511 29 100.0 32 ............................. ATTTCTTTAGCTCACGGGGCCAGGTTCCAAAT 4450 29 96.6 32 ............................C GCAGCCTGGGAGGTTGCGTTTTTTTAATAGGT 4389 29 100.0 32 ............................. TCGGGACATCTGTAGAAGTCTGCCGGGACTAT 4328 29 100.0 32 ............................. GTGGTTCATTGGTGATTTAGTAAAGTTAGCAT 4267 29 96.6 32 ............................C CAAGTCTAAGGCCTGGGCCAGCTCTGCCGACT 4206 29 96.6 32 ............................C TCTGCTGCTGCCAGAGCTCAGATTTTCCAAAG 4145 29 100.0 32 ............................. TACCCACGTTGCATTGCCGCTTTTATCAACTT 4084 29 100.0 32 ............................. AACATCTTAATAAAGTAGAAATTATCCTGCTC 4023 29 100.0 32 ............................. ATAGAGCTGCACGAGGTTGTCGTCGCCAAAAC 3962 29 100.0 32 ............................. GTAATCCAGGAGGATCGACCTCTTGTTAAGGT 3901 29 100.0 32 ............................. TATGTGGGGTTATGGATCCGGATCAAACGGAA 3840 29 100.0 32 ............................. CATCAAGGCCATTCTTGAAAGACACGAAGGCA 3779 29 100.0 32 ............................. CTTGGCGCAAGCGGGTAAACTCGTTTACTTCA 3718 29 93.1 32 ............C...............C TCCCCCGTGACGCTCAACATGGACCAAATTTC 3657 29 82.8 0 ............C..........C..AAG | C [3630] ========== ====== ====== ====== ============================= ================================ ================== 24 29 98.4 32 GTATTCCCCACGTAAGTGGGGGTGATCCT # Left flank : GGACTAAATACGGAAATTGATCAGATTTTGTCTATTGGTGCGGTGAAACACGATGGTACGGAATATTACCGATTGATCAAGCAAGACGTTGATGTGCCAAAACAGATAGTGGAGCTGACTGGGATAACTCCTGCAATATTGAAGAAGGAAGGCGTTCCGCTGCAAGATGCATTAGGAGAATTGGCTGATTTTGTTGGGGATATGCCAATCGTTGGATATAATTTTAGATTCGATTCTGCATTTTTGAATAGAGATTATCGGAAATTCGGGATGCAAGAATTGAGAAATGAGATTAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTCCTGGACAACTATAAGCTGCAGACTGTATTATCAAACTATGGGATCGAAAATAAGATGCCACACAACGCTGTGTCTGATGCAAGGGCTACGAAGGAGCTGGCGATAAAACTAATCAAAAATCGCATTTTAGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : TTTCTATTAAAAGGCGAGCAAAGTTCACGAATCTCTGGTAGAGTAAGTAGTAGAAGAAAGAATGATGAGGAAAAATTATGAGTATTTACGGTAAATATGCTGCTTATCTTCCAGAAATTTTGGACGATACGTTAAAGCAAATTCAAGAAATTAGTCAAGAATACAGTGAAAAAACGGGACAAAAGCTTTACGAACACCTTGAAGGACGTGTCAAGGGCGAAGAAAGCATGACTCAAAAATGCCAAAAGAAGGGTCTCCCGCTGACGCCAGAATCAGCGCTGATTGAAAACCGTGATTCCATTGGCCTCAGAATCGTATGCAACTTTATTGACGACATTTATACTTGCATCGATCTATTAAAAAAGCAGGACAATTTTAAAATCATCAAGGAGAAGGACTACATCACCGATGCCAAGCCAAACGGCTACCGGTCTTACCACTTGATCATGGAAGTAGTTACTCCGTTTGAAGACGTCCACGGCAACAAGCCAGGCACGTAT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGTAAGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //