Array 1 2306238-2305733 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014275.1 Martelella sp. AD-3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 2306237 33 97.0 34 A................................ CTCTTCGGTGTGCCGGTCGGCAGTCTTTCCGGCG 2306170 33 100.0 33 ................................. ACCCGCAAGCAGCGGGCACAGATAGCCCTACGC 2306104 33 97.0 33 G................................ CTTAAGTTGCGGCGGTAGTTGCGCCACGTCTGG 2306038 33 100.0 35 ................................. GGCCCGAAATAGGCAACCCTCGTCATGGTCTTGTT 2305970 33 97.0 34 G................................ CTCGAGGAAGCGCGCGCCAAGGTTCCGGTATGGG 2305903 33 100.0 35 ................................. AGGTTACAGCGGCATCGGCAACGGCCGGCGCTGCT 2305835 33 97.0 33 A................................ AGTGAAGTCATAGTAGTTCCGAAGCGGATAGCC 2305769 33 87.9 0 G............................GC.T | TA,T,T [2305736,2305739,2305741] ========== ====== ====== ====== ================================= =================================== ================== 8 33 97.0 34 CGTCGCCTCCCTCGCGGAGGCGTGGATCGAAAC # Left flank : GATGCCAGACATGCCCATGGCCTTCACCAGATCGTCGACGGATCGGGTGGAGACGCCCTGGATATAGGCTTCCTGGATCACCGCCGTCAGCGCCTTTTCCGCCATCCGGCGCGGTTCGAGGAAGCTCGGGAAATAGCTGCCGGTGCGAAGCTTCGGAATGCGCAGCTCGACGGTTCCTGCACGCGTTTCCCAATCTCGGTCGCGATAGCCGTTGCGCTGGGCAAGGCGAAAGCCATTCTTCTCGCCGTAACCCGCGCCGGTCTTCGCCCCGACTTCCAGCGCCATCAACTTCTCGGCGGCAAAGCCGATCATCTCACGGAGCAAATCGGCGTCGGCGCTCTTCTCAACGAGTGAGCGCAGGTTCATCATGTCGTTGGTCATCGGTGGTGTCCTTCAGGTTGGTCATAAGCAACCCGACCCTACCGGAAATCACCGATGGCTATGAAATCCAGCTACACCACGTCATGGGACACGATCCTTCCTGATGCTGAGCGGTGGTG # Right flank : CGGCGTTCGACGCCGATCAGCGCGCTAAGTTTTTGAAAGATTTAACGCATGTGGGGTCCCGGTGTCTCGCTGAATGACAGCTCTGCGATGGCGGGACTGGCGGCGTTCCTCGGCATGATGTCGGACGGTCTCCTTCAGGACTTTGCAACAGCGGAATTCTCCGATATGTTCCTTATTTGTTCTTTTCCGGTTTTGAGTGAATCGGCCTCATTGGCGGGTCCTGTGGACGGCGACCGAGACAGAACACCGGTGCGCAAGGCGTGCATCGTTGAATCACAAGGGCTTGAGGCAGAACGGTATGAGCGCGGCGCATCTCGAAAAATTGAACGACAACCAGCGGGCCGCGGTTCTGCATGGCACGGATTTGCCTGATGGCGCCATCGGCGGACCGCTGCTGATCATTGCGGGCGCGGGATCCGGAAAGACCAATACGCTTGCCCATCGCGTGGCGCAGCTCGTCATCTCCGGAACCGATCCGCGCAGGATCCTGCTGATGACCT # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTCGCCTCCCTCGCGGAGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2310129-2307637 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP014275.1 Martelella sp. AD-3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 2310128 33 97.0 35 A................................ GCATATGATGTTGGCGACAGCATCTCCAACTTTAA 2310060 33 97.0 33 T................................ CGTCGCGCAGCACTCCGTCATGGGCGCCGAGGC 2309994 33 100.0 33 ................................. TCGGAAAATGCACTGTCGATAGAGATGCGGGAC 2309928 33 97.0 33 C................................ GCAATTTGGGTAACGTTCGGCCCTTCGACAAGC 2309862 33 97.0 33 T................................ GAATTGCGATGGCTGACTGCTTACCCGTCATGG 2309796 33 97.0 34 C................................ ACCCTTACGCGGCAGTGACGAAGAACCTCGTTCA 2309729 33 100.0 34 ................................. ATTGCACGGATGGCGGCGGCCATTGCTTCACGCA 2309662 33 97.0 35 C................................ GTCCAAACATCGTGTCACTCCTCCATGTCGTTTCC 2309594 33 100.0 33 ................................. AATGCTCGGCATCGGTATATGCTGATTGATGGA 2309528 33 100.0 34 ................................. GAGGAAAAGCTCGGAATGAAATTCAGCAGCTGGC 2309461 33 97.0 32 A................................ CAGTTGACGTTGATACAAATTTAGCCGAAGCC 2309396 33 97.0 33 C................................ ATATCAAGGTTGACGGCAGGAGCATTTACGTTT 2309330 33 100.0 33 ................................. ACGTAGGCGTCGGGGCTGGACGCCACCGAGACG 2309264 33 97.0 33 C................................ GACTGCAAAGTAGACTGTCAAGCCACTGCCGAT 2309198 33 97.0 35 T................................ TGCGCTTTATGACGCCAGCGGCAACATCATCAAGC 2309130 33 97.0 34 T................................ GACTGGATGCATGTTCAGGCGGCGAGGTTGTAGC 2309063 33 100.0 32 ................................. AATTTTGTTGGTACCGTGGCCGAGGCAGCCCC 2308998 33 100.0 32 ................................. AATTTTGTTGGTACCGTGGCCGAGGCAGCCCC 2308933 33 100.0 33 ................................. TGCAGATCACCGCCGATATCCGCATGGCCGTGG 2308867 33 97.0 33 C................................ TGCGTGGTTGTCGCTGCGGAGAATGCCACGGCA 2308801 33 100.0 34 ................................. CTTGCCGACCGCAAGTCCGAACAGCGCGCCTGCA 2308734 33 97.0 33 C................................ TTGTCCGGCGCCTGTTTCATGGTCGTCGCAATC 2308668 33 97.0 34 T................................ TCCAACGTCAACCGCTATGGCGGCGGCTTTTCCA 2308601 33 97.0 32 C................................ GCCGTCCGATCCGGCATTAGCGAAATAACAAT 2308536 33 97.0 34 T................................ AATCCGAGATGCAGCGCTTTGCCGATCAGGTTGA 2308469 33 97.0 33 C................................ TCTTCTCCTTCGGCGAGCGCCTGCGGAAGAGTC 2308403 33 100.0 33 ................................. TTCAGCGTCGGCAAAGACAGGCAAAGCGCCTGA 2308337 33 97.0 33 .......A......................... ACCAAACCTATAGCACACTACGCAAAAGGGCCT 2308271 33 97.0 33 C................................ CTCGTCAAAATCTGGCACTTTCGCCTGCGCGAG 2308205 33 100.0 33 ................................. TCGACGACAACAACGAGCTCTTCGGCCGGGCTG 2308139 33 100.0 33 ................................. TTGGAGTACGGCGAATAGTGCGGCCCGATGTAC 2308073 33 100.0 38 ................................. CATGGTGACGGATTATCGCCAGGGCGAGCGCGTGCAGA 2308002 33 97.0 34 A................................ CTGCGTATCCACCGCCACCGCCACCCTCACCGGA 2307935 33 97.0 33 A................................ ACAACTCATCGAAACCCGTTGACCGCACCGCCT 2307869 33 97.0 35 C................................ AGTCTTGAGGTAGTCGGTGATGTCCCACTCACTCA 2307801 33 100.0 34 ................................. ATGATCAAAGGGCGAGGCTGTCGCGTCATCCGCC 2307734 33 97.0 32 T................................ AATACGAGCACCTGGACGGACTGATCAGCGCT 2307669 33 97.0 0 A................................ | ========== ====== ====== ====== ================================= ====================================== ================== 38 33 98.1 33 GGTCGCCTCCCTCGCGGAGGCGTGGATCGAAAC # Left flank : TTCTGGTAACCTACGATGTGCGCGTGAGCGAAGGAAATGGCGCTGCCCGGCTGCGCGCTGTTGCCAAGGCCTGCCGTGATTTCGGCCAGCGGGTGCAATATTCTGTCTTCGAGATCGAGGTCGATCCGGCACAGTGGACCAGGCTCAAGGCCCGGCTGGAAGGCATCATCAAGCCTGAGATGGACAGTTTGCGGTATTATTATCTCGGCGCCAATTGGCAAAGGCGGGTTGAACATGTCGGCGCCAAACCGGCGGTCGACCTTAACGGACCTCTGATGATCTGAAATCCCTGACGTCCGCCGCGCCGAGGTTTTGGGGAGATCGGCGCGAACCACAAGAGTGCCGCAATATGCCGGGAGGTTCGCACTTCCGTCAGTTCTTTGAAATCGTTTATTTTCCCGAAAATTCTTCGAAAAAGAACATCGTCATTCTGCAGCGCCGGTCCGTGTTCGCGATGTCAGGTTGCATTGCCCTGTCTAAATAGGCCCTTATAGTCAGCC # Right flank : CAGTCTGCCGCTTCCTGAGATCGTGTCCCATGACGTGGTGTAGCTTAGACGACCACGGCTCATCCCAGAGGGGCGGATGAGTGTCAGCTTGCTGCTGGCAGGCTGATGAGCGGATCATCGCTCATCGTGGCGATTGTCTCAAGTGTCATGTAGCGGGACCTCTGGACGGCCCATTCGTCGTTTTGCTCCAGAAGCAAGGCACCGACCAGTCTGACGATGGCGTCGTCGTTGGGGAAGATGCCAACGACTTCAGTGCGTCGCTTGATCTCGCCGTTGAGACGCTCGATCGGATTTGTCGAATGAAGCTTTGCCCAGTGCTGCCTGGGAAAGGTCATGTAGGCGAGCACGTCCTGTTCGGCGTTGTCCATGAGCGTGGCGAGTTTCGGCACCTTCGGCCTGATCTGGTCAGCGACATTGCGCCACTGGGTGCTCGCCGCCTCCGGCGTGTCCTGTGCAAACGCGGTGGCGATGAAGGCGGAGACGACGCGCCGCCCGCTCTT # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.50, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTCGCCTCCCTCGCGGAGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //