Array 1 245228-243872 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAAEQ010000001.1 Streptococcus agalactiae strain iGBS447 NODE_1_length_655083_cov_88.6723, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 245227 36 100.0 30 .................................... ATTATATAATAAATATAGAAATAAAGAAAG 245161 36 100.0 30 .................................... TTTTCTAATGTATACTGTAACTGAGGCAGG 245095 36 100.0 30 .................................... TCATTTATAATAGAGTAACAATATTTTTTA 245029 36 100.0 30 .................................... GAAACTTCGATTAGTTTGCGTACTCGCTCA 244963 36 100.0 30 .................................... ATTAGTCCTGTTGTTATGATGGATGATTAT 244897 36 100.0 30 .................................... ACAAACCTCTAATGGATAATATAGAACAAA 244831 36 100.0 30 .................................... ACACAATTAAACATAAAGAAGTGCTTATTT 244765 36 100.0 30 .................................... TCAGGAGATTGTGTGTACTCACGAATTTTT 244699 36 100.0 30 .................................... GAATGAAGCAGGTATCAAGGATTATACTTA 244633 36 100.0 30 .................................... AAATTGTTTTTGTTGTAATATAAAGTCGAC 244567 36 100.0 30 .................................... AACCTTGATAGGCGTACTGTATGGATTCCA 244501 36 100.0 30 .................................... CTACTGTATTATCTGAAATAGTATCGTTTT 244435 36 100.0 30 .................................... TCTCGGGAAATGCAACTGATGCTGCAATCA 244369 36 100.0 30 .................................... AAATTGTTTTTGTTGTAATATAAAGTCGAC 244303 36 100.0 30 .................................... AACCTTGATAGGCGTACTGTATGGATTCCA 244237 36 100.0 30 .................................... CTACTGTATTATCTGAAATAGTATCGTTTT 244171 36 100.0 30 .................................... TCTCGGGAAATGCAACTGATGCTGCAATCA 244105 36 100.0 30 .................................... AAATTGTTTTTGTTGTAATATAAAGTCGAC 244039 36 100.0 30 .................................... TTAATAACTGTCCGTTTTGCCATTTCTTGC 243973 36 100.0 30 .................................... AGAGGGGAAAATATCAATGCCGAATGCTGA 243907 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTAGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : GATGGTACAAAATCATTTGTTGGTACTGATGTTTTAAAGCTGTGCTGTTATTATGCTAGGGCACCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCGATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCAAGATTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTCTTTGTCACTAATACTTGCAAGCTTACAAGGAAAGTAGTGGAGAACCTATCCATAATCAACTAACAGCTATGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //