Array 1 63477-61410 **** Predicted by CRISPRDetect 2.4 *** >NZ_QZHY01000002.1 Moraxella catarrhalis strain COPD_M10 NODE_2_length_348018_cov_16.1818, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 63476 28 100.0 32 ............................ GTCGTTGGACGCTTGCCCACCCCAAAATACAT 63416 28 100.0 32 ............................ TACTATACCTGATTCTTATTCTGTGAATTATG 63356 28 100.0 32 ............................ ATCAATGAGCCAAAGAAAATCAACATCGCTGA 63296 28 100.0 33 ............................ AAGTGATGGCGAAAACTGGACAATCATTGATGT 63235 28 100.0 32 ............................ ATCTCCGCCCATGGTGATGACCTCACTTTTTT 63175 28 100.0 32 ............................ ATTGGGCAGTAAGATACCACAGATAACATAAG 63115 28 100.0 33 ............................ ATGCGAATAAGCGGCGATAAGTCAGCTTCGCAC 63054 28 100.0 32 ............................ TAAACCCAATACGAAAAGATGCCAAATTTTAT 62994 28 100.0 32 ............................ GCCTGCATAGCTTAGGCGAGCTAGTGTACGGT 62934 28 100.0 32 ............................ TAATTGCTCCCCTAAGATTACCGAACAACGAA 62874 28 100.0 32 ............................ GTAAAAAGTCGGTAGGTAGGGCGAGTGGTGAC 62814 28 100.0 32 ............................ AGTTAAAAAAATAAGCAGTTTTAAGACTTGCT 62754 28 100.0 32 ............................ TATATAGCGATACAGCAGATTTTATTGCGATT 62694 28 100.0 32 ............................ AAAACCTTGACACGGTCAGGATTTAGCACATA 62634 28 100.0 32 ............................ AAGTTTTCAGCGATTGAGCCGAATGTCCGCCG 62574 28 100.0 32 ............................ TTTAGATGATGATGACTTTGTCAAAGAAGTGC 62514 28 100.0 32 ............................ AAGATGGTAAGATTATTAGTCTAACCAATCAA 62454 28 100.0 32 ............................ AGAATACAACTGCTTAGTGTATTACCCAAGCT 62394 28 100.0 32 ............................ AAAAGGCGGCCAATACTTTGATGCAGGAAACA 62334 28 100.0 32 ............................ AGGTGGGAAACAAAACAGGGCTTTGTGCAGTA 62274 28 100.0 32 ............................ ATATGGATATAAAGATAAGTATTCTGATAAGT 62214 28 100.0 32 ............................ ATATGGATATAAAGATAAGTATTCTGATAAGT 62154 28 100.0 27 ............................ GAAGATCAGATCTATTATTGAGCGAGC 62099 28 100.0 32 ............................ AAACTTCGGTCGATTTTGACACGGTTGAACGC 62039 28 100.0 32 ............................ GTGATGATGTTGAAAAATATGGCAAGTTATTT 61979 28 100.0 32 ............................ TTATGACACGCTTGGCACTGATTTTAGTGATA 61919 28 100.0 34 ............................ CTGCGAAACTCGGTCATTCGCAAGTTTTGCAAAC 61857 28 100.0 32 ............................ ATGACGATGCTAACAGAAGAACAAGCAGATTT 61797 28 100.0 32 ............................ TCCAAAAACTCACACAGATAAAACGTGATTAA 61737 28 100.0 32 ............................ TTAGCAAGTCTTAAAACTGCTTATTTTTTTAA 61677 28 100.0 32 ............................ AACTGCTTATGGCTGGATTATACCAGTACCAC 61617 28 100.0 32 ............................ ACTTGATTTAGTAGCTAAGCTTGATGTGTCAA 61557 28 100.0 32 ............................ GCCCTCAAAACTGGTTTGCAGTAGCTGATGTG 61497 28 100.0 32 ............................ CCGGTTTGGGATTGCGAAAATGGATAGATGTT 61437 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 35 28 100.0 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTATAAGATACGCCCATCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATAATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : TTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTACAGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCCGCGCGCGCCAATGCCGAAAGCTATAATGCCCAACGCCGCATGGAACAAGAAACCGATAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAATCTAGAGCGCGCCATTAAAGATACTGAAGAGACAGGTACAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCATCCTTGAGAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [71.7-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //