Array 1 58425-59518 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADBOZ010000001.1 Enterococcus faecalis strain C21 contig00001, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	=====================================	==============================	==================
     58425	    37	  97.3	    29	....................................G	ATCAGGTATTTACAGAAAGTTAGGGATAA 	
     58491	    37	  97.3	    29	....................................T	TCAAGTGTTTCTTTTGCCACTGCCCAATC 	
     58557	    37	 100.0	    29	.....................................	ACCTATTAACTCTAAACGCTATTATGACA 	
     58623	    37	 100.0	    29	.....................................	CTAGAATCGTGACAGAAAACTATTACTCT 	
     58689	    37	  97.3	    29	....................................G	ATGTGGCGATTGAACGTTTCTACAAGCTT 	
     58755	    37	 100.0	    29	.....................................	ATGAAGAAGAAAAAGAAGAATTTGAGCTA 	
     58821	    37	  97.3	    29	....................................C	TAAAATTGGCAAAGTTACACCCTTGGTTA 	
     58887	    37	 100.0	    29	.....................................	AAAAAGAATTTTTGAGAAGGTGCGTTGCT 	
     58953	    37	 100.0	    30	.....................................	GAATGTTTAGTTCTGGGTATCTCATATTTA	
     59020	    37	  97.3	    29	....................................C	GTGTCGTAAAGCTCGACACCGTCAAAACA 	
     59086	    37	 100.0	    29	.....................................	GAATCACTTGAATTATTTGTAGAATCAAT 	
     59152	    37	  97.3	    29	....................................T	CTAACGAAATTCAGCGCAACTGACGGCGC 	
     59218	    37	  97.3	    29	....................................C	AGAAGAAAAAGAAGCTTTAGAGCCAACAT 	
     59284	    37	  97.3	    29	....................................T	CACACAGGAGGACAAGACAGACCCCCTGC 	
     59350	    37	 100.0	    29	.....................................	GATACCCCTAAATTTCGTACGTCGACCCC 	
     59416	    37	  97.3	    29	....................................C	CAAGTTGGTACGATTACTCAAAAATTAGA 	
     59482	    37	  67.6	     0	......T..C.........A.A..ACAA..T.TC..C	|                             	
==========	======	======	======	=====================================	==============================	==================
        17	    37	  96.7	    29	GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA	                              	       

# Left flank :   TGTATATCCTTATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCTCAAACTCTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAATTCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG
# Right flank :  CTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCGATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGGAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAATCCAATTTGCGATGACAACAGTTTTCCACTTTTTCTTCGTACCGTTTTCAATAGGATTAGCACTTG

# Questionable array : NO	 Score: 5.88
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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