Array 1 458591-459046 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NTJD01000001.1 Thioclava arenosa strain CAU 1312 contig1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    458591	    29	 100.0	    32	.............................	TGGGGCGGGCGGCGATGCATACCCCTTGTTCC	
    458652	    29	 100.0	    32	.............................	CCCGGTCTCGGCGCAGATCGCCGGGATCAACA	
    458713	    29	 100.0	    32	.............................	ATCAGCCTGTTCAACATCTGCGTAGGCGACGT	
    458774	    29	 100.0	    32	.............................	GGGGCGGTCCTTCCGTCTCTTAATCTGCGTGT	
    458835	    29	 100.0	    32	.............................	GCATACGTTGGTCGTTCGATGCAGCTCTATCG	
    458896	    29	 100.0	    32	.............................	CTCGAAATCCGATGCAAAATCCGTGTGCCCGC	
    458957	    29	 100.0	    32	.............................	GTGTTGGAAACCGTTCCGGCGGTGGCAAACCT	
    459018	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
         8	    29	 100.0	    32	GCGTTCCCCGCCCACGCGGGGATGAACCG	                                	       

# Left flank :   TATCCGTCGCCGCATCTGACAGGGGAAGATCCTGACTTCTGGGACCGCTTCTCGTCGATTTCACAGAGGGCTTGTGCCAAACCTTGTTTTTGCGGTCGAGATCACCCCATCGCATCGCGCACACCTCGGATATACGGGCGGCCGTGAACAGGACGAACCGCATCGCAATCGCGCGGTAGTCCCGTTCAGGGTTCAGGCGCAGTTTCCCAAGCTTCGGAGCCGGAAAGGTCAATAGCGGCAGCACGCACTTCAGTTCGTCTTCGGTAATGGCCGGGCTCGACGCCGGAGATGCGGTGATGGTGTGGAAGGCGCCGACCGATCAGGGCTATGCGTTTCGAACCGCAGGCCGCAATCGTCGTATGCCGGTGGATTTCGATGGGTTGAAGCTGGTGAGTTTTTCCCCGGAAAGACCAACCTGACAGGCCCCGAAACGCCCGGCGGAAGTTGGTAAGCTCTTTGACATTGTAAAAATATTGGTAGATCAATGCTCTACAGCAAGA
# Right flank :  GCATCATTGCGCTGCTTGAGGTGCCCCTAGATTTGTAGACGCTTTGCCCCCTAACTTTGAGGCTAGGAGGCCGACATGGGGACGAGCAATTACAGCGACGAGTTCAAGCGGGACGCGGTGCAGCGGATCACGGTTCGGGGATACCCCGTTCGCGAGGTTGCCCGGCGTTTGGGAGTGAGTTCGCATTCATTGTACAAGTGGCTGAAGCTGTTCGGGGAGCCGATGGCAAAGTCGGTCGATGTCGACCATGAGGCCGAGAACCGACGACTGAAGCGCGAGCTGGCGCGCGTGACTGAGGAGCGCGATATCCTAAAAAAGGCAACGGCGTACTTCGCGCGCGAGTCCCAATGAAGTACGCCTTCATCCGGGCGCATCAAGCCGAGTTCGGCGTCCGGGCCATGTGCCGGGTGCTGCGGGTCCATTTCTCTGGCTTCTATGCATGGCTTAAGGAACCGTTAAGCCGCCGCGCGCAGGACGATGCGCGCCAGACGGAACTGATC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCGTTCCCCGCCCACGCGGGGATGAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [4,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.30,-13.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.14,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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