Array 1 54-2888 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJXI01000096.1 Frankia sp. BMG5.11 contig_223, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 54 29 100.0 32 ............................. AGCAGCGACGAGCCGGGCGGGGCCTCGTGTGT 115 29 100.0 32 ............................. CCGACCGACGACGTCACGGTCATCCTGAGCCC 176 29 100.0 32 ............................. GCAGTCTACCTGCGGGTATGCGGAACTGTAGT 237 29 96.6 32 ............................G GCCGCGGCGTGCGGGGGTGTCGTCGTTCGGGA 298 29 96.6 32 ............................G CACCCCTGTGTAGCGGCCTATCGTGCCGCTGA 359 29 100.0 32 ............................. TACTACCGCAGCTTCGCGATGATGTCCGCTGT 420 29 100.0 32 ............................. ACCCACCGGTCATCGACCGAGGTTTCGCCGGA 481 29 100.0 32 ............................. CCTCATCGCGGCCGTTGCGACCGTCTACGTCC 542 29 100.0 32 ............................. GCGATGTGACCTGCGCCACGCCGTCGCGGTTC 603 29 96.6 32 ............................A CCGGAGGGGTGTTGAACACAACCGCCCGCAAC 664 29 96.6 32 ............................T GGCGGGACCACGTCGAGCCCGGCGTCCAGGAT 725 29 96.6 32 ............................T TGGGTAGGGATGAGCGCCAAGGCGGGGCCTCC 786 29 100.0 32 ............................. GACGACCACCAGCGGGTGCAGCGGGAGACCGG 847 29 100.0 32 ............................. GACCGCAGCAGGAGGAGCAGGGATGACGATGT 908 29 96.6 32 ..................A.......... CGGGCCGGGACGCGCCGCAGCCGGGTGCTGCT 969 29 100.0 32 ............................. TCCGCTTCCCTGGCGTACCGGTCGGACCGGTA 1030 29 100.0 32 ............................. CACAGGGGGTGGCCCGTGCCATGCGGATACTG 1091 29 100.0 32 ............................. CGCGCCGAGCGGGTCACCTCGCCCCGCGGGGA 1152 29 100.0 32 ............................. TGCCGGTACAGCCGCTGCCGGACGGTCGCCTG 1213 29 100.0 32 ............................. GCCTCAGCCCCGGCAGCGATCGCGAGCTGCAG 1274 29 100.0 32 ............................. ATCGCGTCGATCGCGGCGACGAGTGTGGTCCC 1335 29 96.6 32 ............................G GCGGACGTGGTCGACGGACTGTTCTCGCTCGG 1396 29 100.0 32 ............................. GAGAGTCCGCCGCCGTGCGCCTCGCCCGCGCC 1457 29 100.0 32 ............................. GACGTCGGGACCTACGCCGCCCCCGGCCGCGA 1518 29 100.0 32 ............................. AGCTCGGCCGGGGGCTCCGCCGGCAGGGTGTA 1579 29 100.0 32 ............................. GCGCCGGCAGCGAGCATCCCGACGCCGGTCAT 1640 29 96.6 32 ............................G GTGGACGTGATCGGCTCCGAGCTCGACACCGA 1701 29 96.6 32 ............................G GTGCCGTCGCTCTCGAACCACTGCAGCCCCAT 1762 29 100.0 32 ............................. CGGCCGGGCGGTGGGTTCATGGCCACGGGTGG 1823 29 96.6 32 ............................G CCGGGGCGGCGGAAGAAGGGCACGAAGAAGAC 1884 29 96.6 32 ............................T CATGATCATGGTGTGCGCCGCCCCCTCCATGC 1945 29 100.0 32 ............................. GGGTTCGACCTGACCCATTCCTCGATTTGGGC 2006 29 96.6 32 ............................G GGCTCGTACGTACGGTTCGATCGAGGGGGAAG 2067 29 100.0 32 ............................. AGGCCCTCGAAGGGCAGGCCGACGTGGCGGGA 2128 29 100.0 32 ............................. AGCAGTTCGCGCCGATCCTCGCCCAGCAGATC 2189 29 100.0 32 ............................. GCGGGCACCGCGCCGTGGGCGGCGGTCGGGAT 2250 29 100.0 32 ............................. CGGGCGGTTACCTCCGCGTCCCGTTCCTGCCG 2311 29 96.6 32 ............................G CGTCCAGCTTCGGCGACAAGATCAGCCTGCGG 2372 29 100.0 32 ............................. ACGGACCGGCGGATCATCCGGAGGGCTTTCAC 2433 29 100.0 32 ............................. GGCTACGGCACCCCCGGCGACCATCCCCAGTG 2494 29 100.0 32 ............................. GAGGGTGTGTGGAACCTCGTCGTGCCGGAGGG 2555 29 100.0 32 ............................. ATCTCCAGGTGTAGAGGTATCCACATGTGGAG 2616 29 100.0 32 ............................. ATCTCCAGGTGTAGAGGTATCCACATGTGGAG 2677 29 100.0 32 ............................. ATCTCCAGGTGTAGAGGTATCCACATGTGGAG 2738 29 96.6 32 ............................T CTGGCCACCGTGATGGTGTGCCTGTTCAGCCT 2799 29 96.6 32 ............................A CCGCCGAAGGGCACGACGGCGCCCGGCTGGTC 2860 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 47 29 98.8 32 GTCGTCCCCGCACGCGCGGGGATCTTCCC # Left flank : CGCACGCGCGGGGATCTTCCGTGGCACGAGACCACCGCCACGGCGACGATCAGG # Right flank : TACCGATGACGGCTAGTGCGTTGTCCGCGAATGCGGGTCGGTTCTTGTTGATCAGGCGGCGTTTCGGACGTGGCCCCAGCGGTGCTGGCGCTCGGAGCGGATACGGGCGCGTTCGCGGCGCTGGACTTCCAGCACCGCTGGGTCGCGGCGGTGGGTGTTGCGCCAGCGCAGGTAGGCGTGCAGGTCGCGGGCGAGCGCCGGGTGGTTGGGCGGATCGCTGTTACCGAGGGCGAAGCCGCGCAGGGGGCCGAAGTGGGCCTCGATCGGGTTGGCCCAGGACGCCTGGGTCGGGGTCAGGCACAGCTCGGCCTTGTGTCGGCGGGCCCAGGCGCGGATCGCGGTCGTCTTGTTCCCGGACCAGTTGTCCAGGATCACGTAGATCGGGGCACCGTCCGGGCGGGCGGCTCGGATGCTTCGCACTGCGGCCAGGGTGTGGTCGGCTCCCTTGCGCTCGCGCACGACGCCCCACAGGGTGTCGTCACCGACCGAGTAGCAGCCGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGCGCGGGGATCTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCATGCGCGGGGATCCTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,1.05 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 15263-10597 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJXI01000095.1 Frankia sp. BMG5.11 contig_92, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 15262 29 96.6 32 ............................T GGTGACGACAAGCAGTCCGATGGGCCCGCCGA 15201 29 100.0 32 ............................. CCTCGAGGGCGACGCCGCAGCCGACGGCGAGC 15140 29 100.0 32 ............................. TGGGACTGGTGCGCGATGGAGCAGTACGCCGT 15079 29 96.6 32 ............................G GTAGCCCGCGACGCGGTCCTGCACGCCCGCGG 15018 29 96.6 32 ............................T GGGCCAGGCCGCGCGCAGGCAGGCTCCCGAGG 14957 29 100.0 32 ............................. TCCCATGCGCTGCCGTACGCGCTGACCATGTC 14896 29 100.0 32 ............................. CCTCCTCGACCTGCAGGAAGAAGGCCGCAACG 14835 29 100.0 32 ............................. CGCAGGTACTCGCCCGCGTGCTGCTGCGCCAC 14774 29 100.0 32 ............................. CGCCACGACGTCGGGGACTGCCGGTCCGGCCA 14713 29 100.0 32 ............................. CGGGGTGTTCGCCCGATCGCCGCTGCGTTTCA 14652 29 100.0 32 ............................. GGCGCCGGCGTGCTTCTGGAGCGGGGGGTGCC 14591 29 100.0 32 ............................. GGTCATGAGCTGCTGGTAGGTCAGCGGCTTCC 14530 29 100.0 32 ............................. CGCCGTCCCATGCGACCCCGCAGCAGCTCGCC 14469 29 100.0 32 ............................. TCATCGTTGCCCTCCGTGATCGCTACGTCGTC 14408 29 100.0 31 ............................. ACCTCATCTTCACGGGCACGCGGATCGACCC 14348 29 100.0 32 ............................. GTCCTGGTCGCCATCCGCGCCGTCGGTGTCCG 14287 29 100.0 32 ............................. TCCTCGGCTGGTTCCAGGGCCTACCCGGAGCG 14226 29 96.6 32 ............................T CCTCGTCCCGGGGCGGTCGGACCTCGATGTCG 14165 29 96.6 32 ............................G TCCACGGGCGCCCATCCTTCGCGCCCGTGCGG 14104 29 96.6 32 ............................T CGTTCGTTGTGCATATGACCGGTGACGCGCAA 14043 29 96.6 32 ............................G TCGTGCGCCTACGATGCGCGGCATGACGGACG 13982 29 100.0 32 ............................. GCCACGTGTCGGGACTCCAGTGATGGAAGTCG 13921 29 100.0 32 ............................. CGTCACCCCCGACACCACGGGTGCAGCGAACC 13860 29 100.0 32 ............................. GGTGACCGTGCTGCCGCGTGGCGCCCATCCGT 13799 29 96.6 32 ............................G CGAGGCAGCGCGCCCTCGACTCCGCCGGCGTC 13738 29 100.0 34 ............................. GATCATCCGCGTGGGACTGGCTCACATCGACGGT 13675 29 100.0 32 ............................. TCTCCGCAGGTCGGGGCATATTTCGATCATCT 13614 29 100.0 32 ............................. CGACATCAGCCGGCGGCAACCACCCACCCCGA 13553 29 100.0 32 ............................. CATCGCGGCCTCCGCACGCCGATATCTACGGG 13492 29 100.0 32 ............................. TCGTTCTCCTTGAACAGCGAGGCGACCGGCTC 13431 29 100.0 32 ............................. AGATCCCGCAGTCATCCCAGGTCAGCGACTGG 13370 29 100.0 32 ............................. GGCAGGAGCGCCGATGGCGCGCGGGACAGTGG 13309 29 100.0 32 ............................. TCGGGAGCTGGACCGTGCCCATCCTGACCCTG 13248 29 96.6 32 ............................T CATGCTGGACGCACCGGATGCCTACCTGCGGT 13187 29 100.0 32 ............................. CCCGGCCACTGCTCTCGGGGGTGCCACCGGCC 13126 29 100.0 32 ............................. GCAGGCTGGGCGACCGCGGCCGGCGGCGGGGT 13065 29 96.6 32 ............................T GCCTGCTCGGCGCTGTCGGCGAGCCCGGTGTT 13004 29 100.0 32 ............................. CTCAGTCGTCCCGCTCGGGACGAGGCGTGCCG 12943 29 100.0 32 ............................. GTCGGCCCCCCTGCATGTCTGGGGCCACGCGG 12882 29 100.0 32 ............................. ACCTCACCCACAGTCACCACAGAGAGGAGATC 12821 29 96.6 32 .............C............... ACGGCGAGCCGCGGTGCCCCGGCTGCCAGGAC 12760 29 100.0 32 ............................. CGCAGGTATTCCGCCGGCCCCGGACGGGCCCG 12699 29 100.0 32 ............................. GCCCCGAAGATCCCGTCGTGTGACTGGTGTGA 12638 29 100.0 32 ............................. CGGCAGTCCCTACCGCAGAGGCCCCGCCACCC 12577 29 100.0 32 ............................. GCCTCGCGAAGCCGGTGGGCGATGCCCTTCAA 12516 29 96.6 32 ............................T TTCCGCCACCGTGTCAGTCACGGCCTGAGCCT 12455 29 100.0 32 ............................. AGAGTCTCCCCATCCCCCAGAGTCCCTGTGAG 12394 29 96.6 32 ............................T ATCCGCCCCAGTCCGGGCTGCCCGGTCAGGTG 12333 29 100.0 32 ............................. GCCCGATCGACTGCGTCATGGGCGCTGCTTGG 12272 29 100.0 32 ............................. GTCTCGTCCGCGCGGATGCCGTCTTCGGCTCT 12211 29 96.6 32 ............................T GCCAGCTTGGCCGTGAGCGGTGGCCGACGCGG 12150 29 100.0 32 ............................. ACCACGCTCGTGATCCGGGCCCCGGCCGGCAG 12089 29 100.0 32 ............................. AGTCTTCCGACAGCGAAATATTGTTGACCGGC 12028 29 100.0 32 ............................. CTCGCTCTTCGCCGAGCTCTTCGGCACGGAGG 11967 29 100.0 32 ............................. AGCCCCGGCCCCAGGTCCGGGACGGTCGGAAT 11906 29 96.6 32 ............................T TTCGGATCGTCTCGCAGCAGCCGATGGATCTC 11845 29 100.0 32 ............................. AGGCCGAGCTGGGCGCCGGCCCGATGGGTCTT 11784 29 100.0 32 ............................. GCGTACAGCTGCAGATCGCCGGCACTGTTGAC 11723 29 96.6 32 ............................T ACGTCCGCGGCGCCGTCGTGCAGGAGCGGGTA 11662 29 100.0 32 ............................. ATCTCCTCCCGGTCCGCGTCGCTGTCCCCCGC 11601 29 100.0 32 ............................. TGCGCCGCCGCCAGGTCGGCGCCGAGCACCTT 11540 29 100.0 32 ............................. CGGCGGGGACAGGGTCACCGTGGTAAACGGCG 11479 29 100.0 32 ............................. CTCACAACACCTTGACTACCGTCATCTGACGT 11418 29 100.0 32 ............................. CTCACAACACCTTGACTACCGTCATCTGACGT 11357 29 96.6 32 ...C......................... CTGCCGCCCGACAGCGTGATCGCGGACATCGC 11296 29 100.0 32 ............................. GGGCCGCGGACGCCTATGTCCAAGCCGAACGG 11235 29 100.0 32 ............................. TTCTCGCGCTGACCAGGCAGGGCGAGGGCGGG 11174 29 100.0 32 ............................. CCGCTCCCGAGTGCCTCGGCGATCTCCTCCCA 11113 29 96.6 32 ..T.......................... TGGGCCACGCCGACGTACCGGATGACGCCACC 11052 29 93.1 32 ..T.........................G CTCCCGGGCGGCATGTCCGAGCACGGCATCGT 10991 29 96.6 32 ............................G CAGACCACCGAGCCGACCGACGCGGAACTGCT 10930 29 96.6 32 ............................G GACGGGAGGCTGTCACGCAACGGCCGGGCAGC 10869 29 100.0 32 ............................. ACGAGGTGGACGGGTGCGGTTCTCGCCGCGAC 10808 29 96.6 32 ............................G CGCTGTGCCCTGATCTCCTCGCGGATCTCGTC 10747 29 96.6 32 ............................G CAAGCGAACTACGTGATCAAGCACCACCGGCC 10686 29 100.0 32 ............................. GGCACCTCCACCCGGACGTTCTACGACTCCAT 10625 29 96.6 0 ................T............ | ========== ====== ====== ====== ============================= ================================== ================== 77 29 98.9 32 GTCGTCCCCGCACGCGCGGGGATCTTCCC # Left flank : CCTGCCGAGGAGACAGATTCCGCCAGTCCAAACCTGTCGCACGCACCCGGGCAGCCAGCCCGTCATCCTTCATCTGAAAAGCCGGAGTTACCTTACCGACATCATGTAGACCGCACAGCGAGACGAACAAGGAACGGCCACGACCGTCGCTGCACCCGTCCAGGATCCGCCGCGACGACGCCGACAGGTACCTTTCCCAAATCAGCTCACCCACCGCCGCCGTATCCAACAAGTGCCCCAGCAGCAGATGCATCGAACCCCGCGGATCCGACTTCGGTTTCGACTTCCCCCACACCACACCCAGCGCCACATCGCACATAAGACCCCCCGAGGCCGGCACACGAGCACGCCATCAAACCACCACCAGCCCGAGCCCGGACCGGCAGGCCCCTCCCGACACCTTCAACCACCGCACCGGCACGACCGGACACCACCCACCCGACACGACCCGACTGATAAATTCGAGCCCCACCAAGCGGCAAAGCCGCAGGTCAGCAAGT # Right flank : CTGTCGGGGTTTTCACCGGCGCCCTTCTCGGCATGCCAGCGGTGGACCGGCACGACACCCGGTCGCCGAGGTCGAGGCCAATGAGGAAGCCCTCGACCTCGGCCCGGGAGCATGGGGTCAGGGTGATCCCGCGAGCCTGGTAGACGACTGAGACCCGCTCCGCCTCCTCCGGGGCCGGTTCACCGACGCCCCTTACCCGGACCGTTGGTGGAGTCCTCCGCGACGAACAGCACCTGGTAGTACTGGCCCTTGTAGTGCCGGTAGATTCCCGGCCGGGGCGGCGGCCCACCACGAGACTCCAACCGACCCGTGATCATTCAGCGGCGTGTCAGATCATCTGCCTCGTGTCCGGCCCGCCAGGACTTCACACCAGCCGGCCGAACACCTGACAGTGATCTGACTCTCGCTTGACAATCGCTGGTCAGCACCTTGGTCGCGTAGACCCTCTCCCCCAGTGCAGTCCAACCGCCGCCATCACCATCAGGGTAGGCACCGACCGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGCGCGGGGATCTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCATGCGCGGGGATCCTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 25587-26408 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJXI01000095.1 Frankia sp. BMG5.11 contig_92, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 25587 29 100.0 32 ............................. TCGCAGACGAGCGGCTTCGGCGCGGCGGCATT 25648 29 100.0 32 ............................. TGGCAGCTGGTGCTGAGTATCCTGACCGGGCC 25709 29 100.0 32 ............................. TCCGGCCTGCGATGCCCACCCGGCTCCACCGG 25770 29 100.0 32 ............................. CTCGACGTCGTCGTCGGTGATGACGAGCCGGG 25831 29 100.0 32 ............................. GCCTTCTGGCCCGGGTTGAGGTGCCGGCGGTC 25892 29 100.0 32 ............................. TGATCATCTCGACCCAGTTCGGCTCACGGGCC 25953 29 96.6 32 ............................G GGAGCGACGCGCCGTCCGGGCGCGAGGCCCGC 26014 29 100.0 32 ............................. GCATGACCGGCCCGAGCACCCCGGACCCCCAT 26075 29 96.6 32 ............................T CCGAGGACAGGCGGCGCCACTCTCGGTGCAGG 26136 29 96.6 32 ............................T CCGTTTCCCTCACGCCGCTGGCGTGCTTTCCT 26197 29 96.6 32 ............................T TCGTGGCGCGCTCACTGTGGCTCCACCTGCGG 26258 29 100.0 32 ............................. CCGTAGAGAGGAGAGGCCGGTGCAGCAGCTCG 26319 29 100.0 32 ............................. GGTGGCCGGAGAACGGTCGGGAAACGGGCGGG 26380 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 14 29 99.0 32 GTCGTCCCCGCACGCGCGGGGATCTTCCC # Left flank : GCCCGCATCGTCCACGACATCAAAGACCTCCTCCTCGACAAAGACGCCCCCGACCCTGACGAGGACGCCCTCCACCTCTGGGACGAGATCGACGGTCACGTACCCGGCGGCGTCAACTGGGCCGCCGACGTCGCAGACCAGTGGGACGACACCACCATCGTCGGCATCACCGGGCCTGACACCGACACCGAAGCGCCGCCCTGGTGACCGTCATCGTCCTCATCGCCGTCGCCGAGGGCCTACGTGGCCACCTCACCCGGTGGATGATCGAGATCGCCGCCGGGGTCTTCGTCGGCAACCCCAGCGCCCGGGTCCGTGACCGCGTCTGGACCGTGCTCGCCCAGCGCGTCGGAGACGGCCAAGCCGTCATGATCGAACCCGCGGACAACGAGCAAGGCTGGGCCGTACGCACCGCCGGCCGTGACCGCGGCTACCCGATCGACTACGACGGACTGATACTGTTCGCCCGCCCCCGCCGGTAAAACCCCAGCTCAGCAAGT # Right flank : AGGATTCCCCGCATCTCGCGATCGTGGCCGGCGTCGTCCCCGCACGCGCGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACGCGCGGGGATCTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCATGCGCGGGGATCCTCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [38.3-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //