Array 1 231-1098 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJDKP010000163.1 Bilophila wadsworthia strain DFI.5.71 BIMGAIJD_163, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
       231	    28	 100.0	    32	............................	ACGTCGGAACGCTCCACAAACGTCAGGCCGCC	
       291	    28	 100.0	    32	............................	CGCCAGTTCTCCGTCTGGATGCTCGCCTCGAT	
       351	    28	 100.0	    32	............................	TCGATCACGAAGGCCGTGGACGCCGCTGTGGA	
       411	    28	 100.0	    32	............................	TGTATGAAGGCGGCAGGCGTGTGGAGGAAAAC	
       471	    28	  96.4	    32	.........T..................	ATTCCAGAAGCCGGGCATAGTCTCGCGGGGAA	
       531	    28	 100.0	    32	............................	TGTTTCGATGCGGCCCATGCGGACTTCACCAT	
       591	    28	 100.0	    32	............................	ACGAGGGTAGCTGAGAAATATGGGAGAAAGAC	
       651	    28	 100.0	    32	............................	ACGTAAAGGCCAGCACAGCCCCGCCATTCTCG	
       711	    28	 100.0	    32	............................	ATGTCGGAGCCAGCTCGACGCGCCGGAATCCT	
       771	    28	 100.0	    32	............................	TCAGACGGAAATGCTGGCAATGGCCGTTGACC	
       831	    28	 100.0	    32	............................	TCTACGAAGTTTTTCAAGAGTAGACTTACCTA	
       891	    28	 100.0	    32	............................	TAACCAGCAATCAACCAGCACCTAACCAGCAC	
       951	    28	 100.0	    32	............................	TGCGAGAGCGTGATGAGGCGAGAGGTCAAATA	
      1011	    28	  96.4	    32	....................C.......	ACCAAAAGACATATCTGCATCCTCCACAGTTT	
      1071	    28	  96.4	     0	....................C.......	|                               	
==========	======	======	======	============================	================================	==================
        15	    28	  99.3	    32	GTTATCCGCCGTGTAGGCGGTTTAGAAG	                                	       

# Left flank :   TCAAGGGTGTGCAGAATCGCGCGCTAAACTGTGCAGAATCGCGCGCCGCGTTAGTGGATGTAGTCGAGTTCTTCGGGGGTGATCATATCTTTCCTTTGGCTTCATAAAAAAGTTGTCTAAAAAAGAGATTGAGAATAAGGTAGTTACAAATAGAGAGGAAAAGCGAAGTTTCTGAAGTCTTTTCAGGTGTAACCTACTGAAAAGCAGAGATACTTTTGTAAAAGCCTCTAG
# Right flank :  GTCATAAGTTTTTGGAGCAAGGTCAGTTCTTCGGACATGCTTCCTCCAAATGTACACGCGGAATCAAAATATCCGCGCTGAGTCCCAGAAGTTCACGTAGTATCGCGATTTCTGCCTTTGAGGGGCATCTCTTGCCTGTCAGCAGTTCAGAAGTCCGTCCCCGACTTTTCAGATACTTTGCCAGCTCAGACTGAGAAACGCCAAGATGTCCCATGGCAGTTCTGATGAGTCTTGCTGTGAACAAGGCGTCCTCGTTCATTTTCCTTCCTCCACGGCCTTGAGCGCTGCGTCCTTGTAAAAAGTCATCCAGTGTGTGTCTCGGCGTTTCGTTGTCGTATGTCCAAAAACTGGGCGTCTTGAAAAGCAGGAAAGCACCTCGCGCAAGCTGATTTGTGTTTCGTTCCATTTGAAAATCAAAGTTCCGCCCGGTTTCAAAACTCTCCAGCACTCGTCAAATCCCTTCGATAAGTCTTCGCTCCACGTTAGCCTATTAAGGCTTC

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTATCCGCCGTGTAGGCGGTTTAGAAG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTATCCGCCGTGTAGGCGGCTTAGAAG with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-9.70,-9.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [1-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.14,0.37   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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