Array 1 961733-966561 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHBQ010000001.1 Psychrobacter submarinus isolate Psychrobacter submarinus KMM225, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 961733 28 100.0 32 ............................ TTGCATTGACAACTGGCCATCGCGTCTAGTGT 961793 28 100.0 32 ............................ TAGCAAAACAAGGTGATAATATCTCAGCTTTA 961853 28 100.0 32 ............................ TAGTAAATGTAGTTCGTCTACTAATACATAAG 961913 28 96.4 32 ........................A... AGCCATTAGTAGATAAACCGCTAGTACCTGTT 961973 28 100.0 32 ............................ TAATAGGTATGCTACAGCTAGAATAGATACCA 962033 28 100.0 32 ............................ GTTATGTCTGATACTCGAAAAGTTATCTGGTG 962093 28 100.0 32 ............................ GAGAAACGTCATTGAATATGTCACCTTTCGCA 962153 28 100.0 32 ............................ TGCGTTTAGGCATTAGGTAAGTCATAAACTGT 962213 28 100.0 32 ............................ TAGAATACATGGAGAAAAACGGAGAAAGAATA 962273 28 100.0 32 ............................ GCCACTACTTGATGCTAATTTTGACATTGAGG 962333 28 100.0 32 ............................ TGCTTTTTTGGGTCTAAGTTATGCGCGCGTTG 962393 28 100.0 32 ............................ TTTATTTGAGTAAGTTTTTATTAAATACTCGC 962453 28 100.0 32 ............................ TTAGACTGCTACAGTATTGTGCGCGATTACTA 962513 28 100.0 32 ............................ GCGATAAGACTGCGCTAGATTACCTTGCAAGC 962573 28 100.0 32 ............................ TCAGCACAGGTGCGACTGTAATTATACGTATT 962633 28 100.0 32 ............................ AATAAATTCAGCATAAATAGCACTGTAGTTAT 962693 28 100.0 32 ............................ ATCCTGACACTAAGCACCTATGCGAGTCTGTG 962753 28 100.0 32 ............................ AGATTAGTACACGTCCGCCGCGTCGAGCCACG 962813 28 100.0 32 ............................ ACTAGCATTGTTATTCGTACGATCATAATTGA 962873 28 100.0 32 ............................ ACTTGTTGCTTGCTCTTGGTCTAAACCGTCCG 962933 28 100.0 33 ............................ CATAACATCGCTGACCGCTTCGCACAGCTGACG 962994 28 100.0 32 ............................ GTAATGTTTGTTGTATTGCGCTTTGAGTGCGG 963054 28 100.0 32 ............................ AAATAACAAGCCATAGCGCAAGCTTGGTGATG 963114 28 100.0 32 ............................ AAATCAGTAGCGTCTTTATAATCACGAGCTGC 963174 28 100.0 32 ............................ AACAAGTGTGCATTCTGATTCTTTTGTTGTTT 963234 28 100.0 32 ............................ TCCATTCGATGCGGCATCGTCCCCCCTCAAAT 963294 28 100.0 32 ............................ TGCAATCAGATCCGTTTGTGCATAGCCCTAAA 963354 28 100.0 32 ............................ CGACAGCTACGTGTGTTGTTCTGACGGTATGG 963414 28 100.0 32 ............................ TTTCTTTTTGCCTTTCTTGCTACCGTCCATTC 963474 28 100.0 32 ............................ ACAGCAAGCGTTCATAACATCGCCTGGCAACT 963534 28 100.0 32 ............................ ATTGTTAGCGCTGTCAGCGTCACATACCCGCC 963594 28 100.0 32 ............................ TAAGTTTGATCCGGACGATGTTATTTATGTTG 963654 28 100.0 32 ............................ AAAAAGCCGCGTTACCGTGTCACAGCAGGTAG 963714 28 100.0 32 ............................ TGTGGCACTTTCCGCCCCTGCTATGTGGCAGT 963774 28 100.0 32 ............................ ACCTTCTACAGGCTTATAGCCTAAATCTGCCC 963834 28 100.0 32 ............................ GCTAAAACTAACCTTAATGATAGACCACACGA 963894 28 100.0 32 ............................ TAAAGGTAATCTACTGCCCTTAATCGATCCTT 963954 28 100.0 32 ............................ ACTATCCCAATCACTCATTGCTCGCACTCCTC 964014 28 100.0 32 ............................ ATGGAGCGGAAGAAATGATAAATCCCGAGGAG 964074 28 100.0 32 ............................ ACATCACGTGCTCATTGTCCCCCGTCTGATCT 964134 28 100.0 32 ............................ GTTTTCTTGGTTTTAGAAAGTCGTCATTTAGC 964194 28 100.0 32 ............................ GCCACACTACAAAGATGCAAGCGGCATTGAGT 964254 28 100.0 32 ............................ CTCTGAAAATAGCTTGTCTAACACCTCGACTG 964314 28 100.0 32 ............................ AGATGTCCCTCCCCTGAAAATTATCAGTTACG 964374 28 100.0 32 ............................ GCTGGACGATCGACAACCGCCGCGATGATTAT 964434 28 100.0 31 ............................ ATTGCTAGATATTCCATGCCTTTAGCTGCGT 964493 28 100.0 32 ............................ GTCAGCCATACAAACCTACATGCAGATAACAT 964553 28 100.0 32 ............................ ATCTTGTATGGTTACGACCACTTTCATTGTAT 964613 28 100.0 32 ............................ ATTAGGAAATGGGTTTGCTGGACGAGTCAAAG 964673 28 100.0 32 ............................ AAAGTGCTGGCGCGATTGCTTTTATCAGCCAG 964733 28 100.0 32 ............................ ATCAACAATGGCGTCGAGGCAATAGAGGTGAC 964793 28 100.0 32 ............................ TCCTTGTGGTCAATGTAGACGCTATAAGTCAC 964853 28 100.0 32 ............................ GTCATAATCATTGGCAATGCCTAACGACTGTG 964913 28 100.0 32 ............................ ATAGATGATTGCCGCTGGGTTCATTTTCCTCG 964973 28 100.0 32 ............................ TAAAAACTAAATAAGCCCCGTCATTAATTAAC 965033 28 100.0 32 ............................ CGTGATAATCGGCACGCTCGCTTGGGTGACGG 965093 28 100.0 32 ............................ AGGTCTTGTTTGTGGCAAACTGTTTAACTGTA 965153 28 100.0 32 ............................ GTGATGAGTCGCTGCCTGTCGATGAGACAACG 965213 28 100.0 33 ............................ CATGAAATTCATTCGTCATGACATTCGCTTCAT 965274 28 100.0 32 ............................ TTGGTCGGTTGGCTGACCGGTGGTTGACTAAT 965334 28 100.0 32 ............................ GTCAATCCTATCGGGCCGCTTAGTGCCATGAT 965394 28 100.0 32 ............................ TTAGGTTCAACGCCAATAGCTTTAGCAATAAT 965454 28 100.0 32 ............................ GCTTACATGAGATTTATTGATACTACCCTCGG 965514 28 100.0 32 ............................ TTAGCCTTATCTCTTAGTGCTGTAAACTCGTC 965574 28 100.0 32 ............................ TTTTCTTTATTGATTTTATACAGTAACTGCTT 965634 28 100.0 32 ............................ ATTATTAAAGTCATTATAGAACAGATAACATA 965694 28 100.0 32 ............................ CATCTAATGACATTAGACTTGGAATTTGGTAA 965754 28 100.0 32 ............................ GCAGGTGTCGGCTTGATGGTTGGCGGTGCTGC 965814 28 100.0 32 ............................ ACAAGCAATAGCGAAGTAGTTAGAGTTGTGTG 965874 28 100.0 32 ............................ AATACCGCTGCATTAATTGCGATTCTCATAAA 965934 28 100.0 32 ............................ ATACCCTTTTTGCTTAGCGACTCACGCGCAAG 965994 28 100.0 32 ............................ TACATCAAAACCCCGAACTATTGGAGCAAAAC 966054 28 100.0 32 ............................ TTTGGCAGCTTCGACAAGCTCCAAACAGTAGG 966114 28 100.0 32 ............................ TGTGAAATGTTTGGCATACTTTTTCAATCCAT 966174 28 100.0 32 ............................ GCCATGCTTAGGGTTATGTACCGTCTTGTGTG 966234 28 100.0 32 ............................ CATTCAGCCCTAGATAGGCGTTTACGTGCCTT 966294 28 100.0 32 ............................ AATGTCCTCCTGCTGAGAGTATAAATATAATG 966354 28 100.0 32 ............................ CTCGGTTCGGTAGGTCTTGGTCACTCCGTTGA 966414 28 100.0 32 ............................ CATCTAATGTCCAGTTGCGCCAGTCAGCCCAT 966474 28 100.0 32 ............................ GCGTGCAGACCGCCAAGAAGTGCTTAGAGTCG 966534 28 71.4 0 ....................ACCGCCCC | ========== ====== ====== ====== ============================ ================================= ================== 81 28 99.6 32 CTTCCTCACCGCATAGGTGACTTAGAAA # Left flank : GCATGTGAAGCGCATCAATGAGGTTGGTGACAAAGCCAAAGGGCACGTTGTGATCAGACGCTACCGCCATAAAAACGTGCTCAAGCAAGCTGAAGCATTCGCTGAGCACAAAGGCATTACGATGGAGGCGGCACTGATACACTGCGCCAAACACAAACAGGATAACAAACCCTATCCGTATATCAACTTAAGGAGCATCAGCAACAATCAACCCTACGCATTATCTATCATTCAAGAAATGGCAGATAATGAGACTCAAGGGTCGTTTAATAGTTATGGCATTAACAATGCGGCAGATAAGGTTACTTTGCCCCATTGGTAAGCCACTTATAAGGTAATGATGAATTACCCAAAAATTGGGAGAAAAAACCCTTTTTTTGAGCTATTTAAAAACTTGTAATAAAATCAATCAGTTACGATAGGGTGGAAAATGGAGGGTAAAATAGGGTATTTTCACCTCCACGCCTTGTTGTAACTGAATTTTTTGAGGTATAATTCCT # Right flank : CGACTTTATTGGAGGCTGATTTGCTTGAGTCAGGCAGCGATGCCTGACAGGGTGAAATTATCGTAATACCGCTTTTCAAACTCAAAGGGTGACACATAACCAATCGTGCTATGCAGTCGTATTTTATTAAACCAGTCCACCCATTCAAGGGTTGCCAGTTCAACATCATTGATACCAGTCCAGTTCTCCTTTAAATAGTCAATTACCTCATATTTATAGAGTCCATTGACCGTTTCAGCCAGTGCATTATCGTATGAATCACCAGTCGTGCCGACAGAAGCGATGATACCAGAGTCACACATTTTGTCAGTATAGCGAATGGATAAGTACTGAACCCCTCGATCACTGTGATGAATGACATCCTTAGGGTTGTTCCTGTCTGCTATCGCCTGATTTAGCGCAGCCATAACCATATCCGTGTTCATGCGATTAGATACTTTCCAACCGACAATGCTACGGGCAAACACGTCAATAATAAAAGCGGTATATACCCAGCCGCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCTCACCGCATAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //