Array 1 110775-107109 **** Predicted by CRISPRDetect 2.4 *** >NZ_JQCE01000006.1 Lacticaseibacillus saniviri JCM 17471 = DSM 24301 NODE_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 110774 36 100.0 30 .................................... CTGTCGGTAAGGTTGTTGGTGCATTAGTAA 110708 36 100.0 30 .................................... CCGCTAAGTTTGATGATCAGTATGAGCGTT 110642 36 100.0 30 .................................... ATATTATGGACCGGGTGCATTTGAATCACA 110576 36 100.0 30 .................................... AATTGGTGCCTCTCTATTTAATAAACTATC 110510 36 100.0 30 .................................... TACGGTTTTGGGCTGTCGAACCATCAACAC 110444 36 100.0 30 .................................... CATACGAATTGAAGAATGAACGCTACTGGT 110378 36 100.0 30 .................................... TCAAAACTGAGTGCATGAGCTTTTCTTGTA 110312 36 100.0 30 .................................... GACAGCAGCAAGTAAAACAGTGCAAGCAAG 110246 36 100.0 30 .................................... TGCGATTAACCAAAAATTAGTGAAGCTCGA 110180 36 100.0 30 .................................... ATGTTCCTTCAATGCCATAAAACTCACGCA 110114 36 100.0 30 .................................... GTAAATTTTCAAAGCCCACGAAAATTTCCG 110048 36 100.0 30 .................................... TGACCATGATAGTTTCGGCCTGGATTGTTT 109982 36 100.0 30 .................................... CGACGGCCTTGGTAAATGACCCTACATTTC 109916 36 100.0 30 .................................... TGGTCAATCTCGGCATGCTTTCCACAGATT 109850 36 100.0 30 .................................... TTTGGGCTTTGATTATCGTAGGAGGACTTC 109784 36 100.0 30 .................................... CAACCCGGTGATTGGAATCCTACAACAGGG 109718 36 100.0 30 .................................... ACTGAGATAACCCGTCATACTTTGTTTTGG 109652 36 100.0 30 .................................... AATGGTACGCGGATACCAAGCTGCTGTTAC 109586 36 100.0 30 .................................... GCCAGAAATCGGTGGCCGCTTATCGGTTTC 109520 36 100.0 30 .................................... CAAGCGCCAGCCATCTTGGCTCCCGTGACA 109454 36 100.0 30 .................................... GTCAGGCTTTGATGGGTCCTTTGCTTCCTG 109388 36 100.0 30 .................................... CAACCACTTTGCCAAATATCGTTAAGCCAT 109322 36 100.0 30 .................................... AGCAGGTTGTCAGGTGCGAATCCTGACCAG 109256 36 100.0 30 .................................... CTGCATCACGAAGTCGTCGCCATTCAGGTG 109190 36 100.0 30 .................................... TAGCGCCTTTGTTGATGTTGTAGTACAAGA 109124 36 100.0 30 .................................... AACGTTGTTCCGATACACGTCGCGGCCTAT 109058 36 100.0 30 .................................... CTGTTGTTAGATACTTGTCGCGTCGCTGCA 108992 36 100.0 30 .................................... ACATCCAGTGGCCCTGCATCTTCTCATACG 108926 36 100.0 30 .................................... GGCAGAGCTGATGCAGATTGAAGAAGTGCC 108860 36 100.0 30 .................................... AGCACGGAAGAGATTTGGATTATCACTGAT 108794 36 100.0 30 .................................... TATCATTTAGGTCAATAGACAACTGATTAT 108728 36 100.0 30 .................................... TGCGATAAACAAAATGGCCACCTTTGGCAG 108662 36 100.0 30 .................................... GCCGCCACTAGATTGTTGTCCCTTGCTTTC 108596 36 100.0 30 .................................... TACATTCGCGTCAGTCCAAACGAAGGACTG 108530 36 100.0 30 .................................... TTGATAGATGACTGAATAGCCATCATCACC 108464 36 100.0 30 .................................... CCCCACAATTTTAACAATGTCAAACTATTT 108398 36 100.0 30 .................................... TCTGATTTTTTTATTCGCTGTCTTTTCTAG 108332 36 100.0 30 .................................... GTAGTCACCGCGGTTACTATCAAATTGAGC 108266 36 100.0 30 .................................... CACGCGCTAAACCTTCCTTCAAAGCATTCA 108200 36 100.0 30 .................................... TGTGATGCTCGCAATATTCGTCATTTTTGC 108134 36 100.0 30 .................................... GACGCCTTGGGTAATCGCTGAGTACCATCG 108068 36 100.0 30 .................................... CGGTCAAAGTCGGAATAATCATCGTCATGT 108002 36 100.0 30 .................................... ACGCCACGGCACACGATTACAAGTCTGGCT 107936 36 100.0 30 .................................... CCTGTATCCCGTACTTATGCTTAAATTAGT 107870 36 100.0 30 .................................... GATAAAGTTCAATCGTGTTGGCCACGTCAT 107804 36 100.0 30 .................................... GCTATCAGCTTCAAAGTAGGCTGGCATATC 107738 36 100.0 30 .................................... TGTTGCTGGTGATGGTGGAGTACAACCGGT 107672 36 100.0 30 .................................... GCCGCCAGATTCTGATTGGATAACGCCTTG 107606 36 100.0 30 .................................... CTTTATCCAACGCCTTCACCCATGCCGGTG 107540 36 97.2 30 ....................T............... TGAAGTCTGTGTAAGTGATTTGGTCGTTGA 107474 36 100.0 30 .................................... AAGTTGAGGGTGGGTCTTGGCCTCTAAACT 107408 36 100.0 30 .................................... CTTTATCCAACGCCTTCACCCATGCCGGTG 107342 36 97.2 30 ....................T............... TGAAGTCTGTGTAAGTGATTTGGTCGTTGA 107276 36 100.0 30 .................................... TAAACTGATGGGCATCGTTGGCAGCCTTAT 107210 36 100.0 30 .................................... AGTAATTAATGATAAGCCCGTGACAACGCT 107144 36 91.7 0 .......C....................C......T | ========== ====== ====== ====== ==================================== ============================== ================== 56 36 99.8 30 GTTTTAGTTGGATGTCAGATCAAATAGGTTAAGCAC # Left flank : GAGATTGACCTCGACAGAACGTTTCAACGTGTTGTCCAGAAACAGCTAATCAAGCTAATGACTGATCAGGAGAAACAGCGTCTCGTCGACCTGTCTCAGCAGTTGGCAATGGAGGTTTTGTCCCGATCGTTCTTACTCGACTTACCACTCAATGTTTCGCCAGAGAATTCAATCCCGGCAATCATGAAGATGGTCAAACTGAGTTATGACGAAGAGATAAAGCAGCATCCCTATGATATAATTGAAACCGTATTGAAGACACTAACGGAAGTTGATGATCATCAACTTTCAGTATTTACTAACCTGAGTCATTACTTGGATGTCAGCCAGATTAATAATTTGGTCGAAGTAGTGGCAGATGTTGACATTGAAGTTCTTATCATCGAATTCTCAAAAGTGAGTCGACAGGATATGTTTGCAAATTGCGACTATATCTACATTGACGAGGATTTTGTGGCGTTCGATGATGAGCATAATTAGAACCCAATGATAAAAATGCG # Right flank : TATCGAAGACGGGGGAATGCCATAGCTGTCATTCTTAATTGGATGGTTGGAAGCGGCAGAGTTGTGCAGCCTTGGCAACATTGAGTATGACCTGTGAATTTTGTATTGACTTAGAGTAAACACAAAATGGTTTTAACGAGAGAAGGGCCAGGACACGATTTGATATAATACTATAAGAGTGGTATTATAGCTAGAATATGTTCATTAGTGTAAGTGTTTTAGATGAATGTCAGATCATTGAGGAACCACGGACTCTTTTTGGGTTCCGTTTATATTTGTACCTACTTACACTAATAACATTAAAAAGGAGATGTTAAAGCTTTTGTATGATTTAAATGGACATAAAGTGAGACTGATTGCAGCGAAAAATAGCAATGGTTTTCTATATGTCGCTCAGTATCTCGTTAGCGATAATGTGGTAAGTGTGGTGACAAGTAAAGAAAGTCTGATGACTGCTTATTGTCACTTAGAGAAAGTGATAGAGAACGGGGGCGGTAAGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTTGGATGTCAGATCAAATAGGTTAAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //