Array 1 7808-7975 **** Predicted by CRISPRDetect 2.4 *** >NZ_MLAF01000043.1 Rodentibacter heylii strain Ppn222 contig_43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ================================= ================== 7808 34 97.1 33 .................................C CTATATCCTGACCCGTTTCTTGTTTATATTTTT 7875 34 100.0 33 .................................. CAAGTCGTCCCTATAGATATGTAACAGAAAAAG 7942 34 94.1 0 ..................T..............T | ========== ====== ====== ====== ================================== ================================= ================== 3 34 97.1 34 GCAGCCGCCTTCAGGCGGCTGTGTATTGAAACAG # Left flank : TGGGAGTGAATCATTTATGATGATGTTAATTACCTATGATATCTCTTTTGAGACAGATGATGGTGAAGGAAGGTTACGTAGAATAGCTAAACATTGCTTGGATTATGGCGTTCGCGCGCAATATTCAGTGTTTGAATGCGATGTAACGCCTGATCAATGGGTGGTTCTAAAAGAGAAACTTCTCAATACTTATGATCCTAAATGCGATAGTTTACGGTTTTACCATTTGGGTAGTAAATGGCGTAATAAAGTAGAACATCACGGAGCAAAACAATCAATAGACATATTTAAGGATACGCTGATTTTATAATTCGCTAGCCTATAGTTATCAAGAAAAAGCTGAGTGGTTAGCGATAATAAAAGTTCTTTAAAAATTAGTATCTTATAAAATTGAAGTATGGCAAGAAGAGCTGTGTTATACTTCACATCACTTCCAAGGTAAAAGCTTAGCGAATTAGGGGCAGTAAAGCCTTATACTGAAAGGCTTTAAAACCTAGGGA # Right flank : TCTTTGTAGTATTCATCTACTCTCAAATCTAAAGCCTCCGTCTTGGAATAGTTGAGTATTAAGTGATTACAGACCTTTTGTTTAAAACTATAGTTAACGCTAGATTCGCTTACAAATAATGTCTATAATGACTGTAAATTTAAACAGATAAAATAATGCTATGACGGATATTTCTGAATTACTTGATGGGTTGAATGATAAACAGCGTGAAGCGGTTGCGGCTCCCCTTGATAACTGTTTAGTGCTGGCGGGGGCGGGGAGTGGTAAGACCCGTGTATTAACTCACCGTATTGCTTGGTTGATGGCAGTAGAGAATATTTCTGAAGGGAGCATTATGGCGGTGACTTTTACCAATAAAGCCGCAGCGGAAATGCGCCATCGTATTCAAGAAACATTAGCCAAACATTCCCAACACAGTTTATTCGGAATGTGGATTGGCACTTTTCACAGCATTGCTCATCGTTTATTGCGTGCGCACCATTTAGATGTCGGTTTGCCGC # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCGCCTTCAGGCGGCTGTGTATTGAAACAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCAGCCGCCTTCAGGCGGCTGTGTGTTGAAACAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.90,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //