Array 1 9374-9587 **** Predicted by CRISPRDetect 2.4 *** >NZ_LTDX01000070.1 Lactobacillus acetotolerans strain BM-LA14527 scaffold36, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 9374 29 100.0 33 ............................. TGGGTTTGCTAAACAAGGATTTGCCGCCGCTTC 9436 29 96.6 33 ............................C GAACATGGTTGAATTTGTAAAGCTAATGGCAGA 9498 29 100.0 32 ............................. AATAAATTACCACTCGTTATCCCTGGGTTCAA 9559 29 72.4 0 ............T........AAAT.TAA | ========== ====== ====== ====== ============================= ================================= ================== 4 29 92.2 33 GTATTCCCCATGCATATGGGGGTGATCCT # Left flank : GCGGCTAGTTCAATTCTTTTAAAATATTGTAGAAGGAAGCCAATCTAATTAACATTATTTTATAGAAAATGATTTTCAGCCATAAGTTTGAATGGATTGCTGTCAGATTAACGTGGGAAGTATTAAAGTGATTAAAGACTTAACTATGAGAGTGAAAAGATCAGTTAAGCAAAGATATAAGGAAAAGTAGATGTGTCGCTTGATTGCTCCTTACTGAGATGCCAGAAGAAGCTACTAAATTACAGCCATCGGAGTGATTAAATTTATCTAAAAAAGCAAATACATGCTAGTCGAGTCAAAAAGGAAAATGCCAATTAATAATCGTAATTGTTATTTTAATATACGTTTAGATTTTCGATTACGATACATTGTAAAAATTTTTATCAAAGGACAGCTGGTGGTACGATTTTTCACTTGATGTTGAATTATAGTGGTGTGATAAACTAAATAAAAGAGGGACTTTTTAAAAGTGAGAATGTTGTCATAATAAGGATCTTTAA # Right flank : AAAATCGGTAAATCACGAGTAGAGTTGAGAGTCTCTTAAATACTTTACAGGAAGCAGCTTCTGGCTGCTTTTTTGTTTAAAATTTTCGATAAATCTTTACTAATTACGCATTTTTTGTCTAATTTAAGGTACTATAAAATAAAGCGTTTCCAACAGTGAGACCGAACCCGAAAGAGGCGTGATCAATGTCAATACCTTTATCTAAAAGAGCTAAGTCATTGTGGGCAAAAAAGCAAAATCACGATGGCCAGGAATTATGGTTACCGTTAGTTGCTCATTTAGTTGATACCCAAAATGTGATTAACTGGCTTTACCAAAATTGGCTGAATGAAAGTCAACAAGTTATAATTCAGCGGGATTTTACGACAGATGATACTGAAAAGTTACTAAAGTTTGTTGGTTACTTCCATGACATCGGCAAGGCAACGCCAGCTTTTCAAACCAAGCAGTCGTATAATCGGAATCAGACGTTAGATGATGAGCTGATGGAAAAACTATTA # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATGCATATGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.20,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 19087-19541 **** Predicted by CRISPRDetect 2.4 *** >NZ_LTDX01000070.1 Lactobacillus acetotolerans strain BM-LA14527 scaffold36, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 19087 29 100.0 33 ............................. AACAAATATAGTATTGCTGATATGACCAAGTTA 19149 29 100.0 32 ............................. GTCCCAACTTAAGCAACAGCTTAAACCAGTTC 19210 29 96.6 32 ............................C AGTTTGCCACTTGAAATTTTGGCCAAGTTGGT 19271 29 100.0 32 ............................. CAAACTAATCAAATTCAATTTGTTGCTTATGA 19332 29 100.0 32 ............................. CAGATGGCGCGGTCAATGAACCAAATCATCAA 19393 26 89.7 33 .........---................. AAAGCATCTTCAAACTGGGTATACTGTGACTTC 19452 29 96.6 32 .......................A..... CTTTCAAGATAACGATGGGAATTACCACATTG 19513 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 8 29 97.9 32 GTATTCCCCATGTATGTGGGGGTGATCCT # Left flank : AGTAATCAGATAATTTCAATTGGAGCAGTCAAATGTGTAGATGGGCACGTAGCTTCTTTTTATCGTTTAGTAAAATTGGAGAAGGGACGGACAGTTCCAGTGAACATAGCACGGGTGACGAAGCTGAGTGATGCATTGCTTAACCGTGAAGGAGTAGAAACTAAGGACGCGATAATTGATCTTCAACACTTTGTAAAAGATCTGCCGATAGTCGGATATAATTTAATGTTTGATGAGCGCTTCCTACAAGCGGCGGTCATTAAGAATAACTTGATACAATTTAACAGTAAATTGATTGATATTCTTCCATTAATTAAGAGGGTCAATAAGTTTTTTGACAACTATCGATTATCAACGGTTTTAAAAAACTATGGTATTAATAATGAGAGTCCGCATAATTCTCTTTCAGACGCAAGGGCGACGATGGAACTTGCTAATAAACTCATTAAAAATCGGGATCTAAGGATTTAAAAATCGCGGTGTGACAGGGATCTTTTAGT # Right flank : TAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCATGTATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCATGTATGTGGGGGTGATCCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //