Array 1 84667-85657 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMRY010000014.1 Bacteroides thetaiotaomicron strain 1001275B_160808_C9 NODE_14_length_139455_cov_24.2741, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 84667 29 100.0 35 ............................. AAAATCCTTATAAGTCTTGTAGTAAGAAATAACAC 84731 29 100.0 34 ............................. ATTAGATTCGATAGCCCGTTCAATTTGTCGGATA 84794 29 100.0 36 ............................. AGTCATACTTAGATCATTTTACTCGCTTATCGTTTT 84859 29 100.0 34 ............................. TTGAATAACCGGCAGGCAGAGAAGACACTACTGT 84922 29 100.0 34 ............................. GGATAAGCCGTAAGAGTTAATTCTTTAATTTCAT 84985 29 100.0 36 ............................. TGTTTTTATCTGCCGTTTCCTGCGCACCTCTTGCGA 85050 29 100.0 35 ............................. GTTGATGTAATTACGCAGGACTCCCTGTGAGGTCA 85114 29 100.0 34 ............................. GAAGGTTCCTTTATCTTCTACCTTGTTACAGATG 85177 29 100.0 34 ............................. TCGGGAGACCTGGTGTTCCGCCAGTTGCCCGGCA 85240 29 100.0 35 ............................. GGGATTGTAGTAGAATCCTTTGGATCAATCTCTTT 85304 29 96.6 36 ................A............ AATTTTGCTAATTCGATTTGAAGTTCAGCAGCTTGA 85369 29 100.0 36 ............................. GAGGAACCGGCAAGTATCATCATTAAAGAAGAAATT 85434 29 100.0 36 ............................. ATGATTAGGGATAGTTGATTACCAAAATCGACGCCT 85499 29 100.0 36 ............................. ATAATTTGACTGTAGGTGGCTCTATCTACCTTCAAG 85564 29 100.0 36 ............................. AGCGATATTGTAGTAAAAGCAGGAACTGACGCTATT 85629 29 89.7 0 ...........G.....T......A.... | ========== ====== ====== ====== ============================= ==================================== ================== 16 29 99.1 35 GTATTAATTGGACCTTGCGGAATTGAAAC # Left flank : CTTTTAAGATGTATTGGTAGAGTATGTATGTCATTTTAGTATATGATTGCGGAGAGAGAAGAGTAGCTAAAATGTTGAAACTGTGTCGTAAATATTTAAACTGGATACAGAATTCTGTTTTTGAAGGTGAAATATCTGAAGTACGCTTAAAAGAACTCTTATCTTCAGCTAAAAAGTTTATAGATGAATCTGAAGATAGTATCATTGTTTTCAAAGGACCTAATCATAGCTCTTTGGAAAAAGAAATAGTAGGGAAAGAACGGTGTAGTATAGATAATTTTCTGTAACTTAGTTGTCGATGATTCTAATACTAGCTTCCTTCCCAGGGAAGATACTTTTTAAGAGCTCTTTGACTTGTTGATTTACAGCAATATAAGTGTAGTGTCGATCTCCAGTACTTTTTATACTTTTAGGGATCGACACTCTTTTGTTCTTTTAAAAAACTTTTTTAGAATTGTAACTTATTCATTTATAATGGTGATTGTTGGATTGATGAGAGA # Right flank : CTTGTGATTTCGTTTTTTTGATTGATTGCTATTCTGATACTAATGAAAAAGACTTTAACTGGCTAGAGTGCTTTATTTTCGATATTATTTTATACATGAAGGTGACTTCAATTATATACTGATTCTTGAAATGTAGTTTTATAGAATAATAAGGTCAATCTTTGCTTTTAGTTTATTTGTTGTAGTTTGAATAATAATAAAAAAGATTTTTACCATTCATAAGAAATACAGATCTGAGGCACCCATTCCCATCTTTTTTGTATGGTGTTATATTGATATTGTACACTGGTTTTCAATTTCCAGCCTTTGCCTATTTTTAAAACAATATCGCTGCCTAGTGTGGTTGGTATTGCTTCAGAGGAAAGTCCACGATATCTTCGGGTGTCCAGATTTTGTTTACCATATATGCTAAGAAACCATTTTTTAGAGAGCTTATAATCCATTTGAGTTTGGATATGAAAGTGGTTTGAACTTTCACTAAAGTTACTTTTACTATGCAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGGACCTTGCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //