Array 1 280483-279591 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVJS010000002.1 Tamlana crocina strain HST1-43 seq2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 280482 36 100.0 30 .................................... TGGCAGTAGTACAAAATACCTTAATCGGTA 280416 36 100.0 30 .................................... GCATACAGGCCAAAGCGCTTCACGTAAGTA 280350 36 100.0 30 .................................... TCCTTTTTAATCAACCCTTATTAAACATAG 280284 36 100.0 30 .................................... TCAGGCGGTTTAATAAACAACCCCTTTTTT 280218 36 100.0 30 .................................... TTCGCTACTTATATCGGTGAAACAATAGTT 280152 36 100.0 30 .................................... TTTAACTGGAAAAAACCTACCGCCTACCCC 280086 36 100.0 30 .................................... TTTGGTATTCCAACGGGTAACCAATTTGGT 280020 36 100.0 29 .................................... ACCATATTGCAATCCAGAGGAAAGCACAA 279955 36 100.0 30 .................................... CTATTGGTTATAATAGTAGCACCAGCAGAT 279889 36 100.0 29 .................................... ACGTGTCTGGAGTCCTCGGCGTCTACTAT 279824 36 100.0 30 .................................... GCGTTTATGGTTGGTATGCGTTGGGTGAAG 279758 36 100.0 30 .................................... GTTATGCGCACTTACCGTAATATACATGGT 279692 36 100.0 30 .................................... CAATACGAACGAACTTCATACTATTTTACT 279626 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 14 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : GTGAGGCTGTAAATTATTTGATTCAACAAGCAAGAAAGCAGGAACAATACTACGAATTTGTGAGGATGAAAATTGAATTAGGAGAAAAAAGTGGTTTGGCCAAAAAGCAAACTAAAGAGCAAATGCTTGCGGAGTTTAAGGAGAGATTAAATGTATAATTATGATTTAAGCGAACAAGCTAAAATAGATTTGTTGCGTATTTATGAATATGGTATTAATCGGTTTGGTATAGAACAAGCTGATAGATATTTTGATATGATGCACGATTGTTTTAGTAAAATTGCTAGAAACCCTTATTTATTTCCATCTGTATCAAATATTAAGTCAAATTATCACAAATGTGTTTGTGGCGTAGACGCTATCTATTATAAAATTGTTAAAAATGGAATAGTGATTACCACGATTATAGGTAGACAGGACTTTGAAATACAAAATTTAGTTCATTGACATAAAAGTTTTAGCATTAATGCCCAAAAAAAAACGACGCGAGCGAAGCGAGC # Right flank : ATTTGGCTTGTTGTCTTTTGATATTCAGAAAAATACGTGTAAATATCGTTTTCAAAAATGCCCGTTTTTTGCAGTGATAAGGCAAGATTGGGGCATTTTTTGGTTTTAAAACAACTCTAATTGGGTGGGAGGCGGTTCTTTGGGCACTTCGGCGCGTCCCCAAAAATTCATGATGTTGCCGTATTGTTTGTCGGTTATCCGCAGTACGCTAACCTTGCCCAACGGAGGTAAAAGGCGCTTTATGCGCTTTTCATGTACATCGGCACTTTCGCTGCTGGCACAATGCCGCATATAAACCGAGTATTGCATCATGGCAAAACCATCTTTCAAAAGGTTTTTTCTAAATTTGGCCGCATTTTTTCGGTCTTTGGCCGTATCGGTAGGTAAATCAAAAAATACAAATAACCACATAATCCTATATCCGTTTAGTTCCATAAATCGGGATATTTTATGGTTTTCCGTTTCCCCGAAAAACATTGCTGTAGCGAGCTGGCCGTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //