Array 1 207-31 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNEF01000045.1 Pseudoalteromonas piscicida strain S2049 S2049_S24_L001_R1_001__paired__contig_45, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 206 36 100.0 34 .................................... CATTATTCCAACCCAAAGATAGGGTTTGTCCTTT 136 36 100.0 34 .................................... CTCTTGCGCAAGAGTTGCGCAAAATAAAAATAAA 66 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================== ================== 3 36 100.0 34 GTTGCAGCAACATTTGCCGTAGAGGCAGTAGAAACC # Left flank : AGATTTAGCAAAAAATGAGATCTACCAAATAAATTTGTGAAGCTTGTCATTTGTAGGTCGTGATTTATCACGACACAGAATTTCCGCCGCTTAAGGTGCGATATAAAAACCAAAAAGATCGCGGGGTGAACCCACTTTTACTCGCTATAAGTAAACGCCATTTCAATAATCTTGTACCTTTTATTTTAGGGTGCGTTTTTAACACTTTTTTTGAGGAACTTATACAAAGAAACAAAGGGTTATAAGCAAAAGTTGCTACTGTTCTGGATGAACCTATTCCCTAATTTAGGGATTTTTTAAAAATACTATAAATATCATACTGTTAGCTTAAAAAGCCGCCTTTAGGTTCATCCAGTTCAATTAAATCAATAAGTTAGCCTAACTTTTTACTTTCAAAATGGCTGTTTTTTGCTAAAATCAACGCAGTTTCTTGATTAACGCTGGAGGTTCATCCAATTAGCCGCTACAGGCCACGCCAGTCAAGGGCTACAGAAGGTAGG # Right flank : CAAAGGGGTGCGAAGTTAGCTGCCATAGAAC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCAACATTTGCCGTAGAGGCAGTAGAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA // Array 1 3148-2832 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNEF01000035.1 Pseudoalteromonas piscicida strain S2049 S2049_S24_L001_R1_001__paired__contig_35, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================ ================== 3147 29 100.0 44 ............................. ACTGAGTATGTCACAAAAGAATTACCTGAAAGCACATAGTTTCT 3074 29 100.0 43 ............................. AAACAAATCAAAAACACATCCTAAAATACACCAAGATGTTTCT 3002 29 100.0 42 ............................. CTTTCGTTTAACGATAGCGGAAACGTAATCGCAATTGTTTCT 2931 29 100.0 42 ............................. TGAATTCTAATCAAGAGTTACTTTGTATGAGTCATAGTTTCT 2860 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================ ================== 5 29 100.0 43 ACTGCCTCTACGGCAAATGTTGCTGCAAC # Left flank : GCTGGTTGACTACCAACGACTAATCGTTGTAGTTGTTGACAGAGGCGCAGGGATGGAAGAAGAAAAGCTAGCAAACGCAGTACTGCCATTCTTTTCTACTAAACCCAGTGGCACAGGCATAGGACTTAGTATTTGTAATGAAGTTGCCATTGCCCACGGTGGACAACTTAAGCTATTTAATCGCGAAAAGGGCGGACTAATGGTGCAGTTTGATCTGCCTCTCGTTGCACCTAAAGCATAGCGTTGTTATTGCACTAACCCATATCGGGTAGGAGCGGGTTCACCCAGCGATCTTTGGGTTTTAATGCAATACATTGTGCGGTGGAAATCTTTTTGTCGTGATAAATCACGACCTACAAATAACGAGCTTCATAGGTTTATCCTGTAGGTCTTGCTTTTTTGTTAATCTAGGGTGCTCACGAGGGCTTTTTAACGCTGTGTAACGTCTTAAACACCAATCATCATTTCTAGGTAGCGATAAACAATGCACCTAACCTCAC # Right flank : CCTACCTTCTGTAGCCCTTGATTGGCGTGGCCTGTAGCGGCTAATTGGATGAACCTCCAGCGCCAATCAAGAAACTGTGTTGATTTTAGCAAAAAACAGCCATTTTGAAAGTAAAAAGTTAGGCTAACTTATTGATTTAATTGAACTGGATGAACCTAAAGGCGGCTTTTAAAGCTAACGGCATGATATTTATAGTATTTTTAAAAAATCCCTAAATTAGGGAATAGGTTCATCCAGAACCGTATTACCTTTTATTTTTTAAATTATTGTTTTATTTGCAAAATACGTACAAATATAAGACTTAAAACAAGCGAGGTTTTTTTGAGTCATTGGCTTTTGTGAATATCACTTTACCTTCTTCAAGAACTTACCTATTCTGCTAACTCAATTAACATGATGCAAGGAGCCAGTACTCGATGGAGTTAAATCAAGAAGCAATCACCAGCTATCTTAACGAGCTGCTATCAGACTCACATTCAGACTTACTCAAAAGTGCAACC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTGCCTCTACGGCAAATGTTGCTGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 12739-13124 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNEF01000071.1 Pseudoalteromonas piscicida strain S2049 S2049_S24_L001_R1_001__paired__contig_71, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 12739 35 100.0 35 ................................... AAGAACATAAAAGTAGAATAGTTATAAGTTTAAAT 12809 35 100.0 38 ................................... ACTATTTCACTTCTTTGCGGGCGTAGGCGGTCATACTA 12882 35 100.0 34 ................................... ATATGTATTTAACGATTGAAGAATGGTCATGATT 12951 35 100.0 35 ................................... CTTTTGAGTTTGATTTAATAAGCATTTTTGTTCTC 13021 35 100.0 34 ................................... CCTTTTGTCCATATACTTGCATCATCATTGCTGG 13090 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ====================================== ================== 6 35 100.0 35 GTTGCAGCAACATTTGCCGTAGAGGCAGTAGAAAC # Left flank : CGACTGCTTTGAGTGTGGTTGTCGTTGAAGCAGTAGAAACGAATTTGTTTTTTCTAGGAGACCATTTATCTTTAAGTTGCAGTAACATTTGCCGTAGAGGCAGCTAAATCACAAAAGATCGCGGGGTGAACCCGCTCCTACTCGGTATGAGTAAACACCATATTAAAAATCTTGTACCTTTTATTTTAGGGTGCGTTCTTATCACTTTTTTTGAGGGTTTTATTCTAAGAAACAACGGGTTATAAGAAAAAGTTGCTACCGTTCTGGATTAACCTATTTCCTAATTTAGGGATTTTTTAAAAATACTATAAATATCATACTGTTAGCTTAAAAATACGCCATTTGGTTCATCCAGTTCAATTAAATCAATAAGTTAGCCTAACTTTTCACTTCCAAAATGGCTGTTTTTTGCTAAAATCAACACTGTTTCTTGATTGGCGCTGGAGGTTCATCCAATTAGCCGCTATAGGCCACGCCAGTCAAGGGCTACAGAAGGTAGG # Right flank : AGATCAATGGCATAACGCTGGATCAACTTTTCTTCGTTGCAGCAACATTTGCCGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGCAACATTTGCCGTAGAGGCAGTAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //