Array 1 983391-984686 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072210.1 Parabacteroides distasonis strain CL11T00C22 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 983391 33 100.0 34 ................................. GCAGATACCAATATCAAATCTCCTTCTTTCATAT 983458 33 97.0 33 ................................T CGTCATCATCGTTGGCTAAAAACGCAGAAATGG 983524 33 97.0 32 ................................T ATCTCACACTGCATTGCTTCCACAAGCCTGTA 983589 33 100.0 32 ................................. TAACATTCAAAAAGTCGTTTTTCGAGCGTTTT 983654 33 100.0 33 ................................. AGACGTCCGGATCCACCCCTACCTCTACCAGAT 983720 33 97.0 33 ................................T GACGGCTGTTATCCGGGAATTGCTCCGCAGTAC 983786 33 100.0 32 ................................. ACACGTGGCTGGCCGTCCTCGGTAGCTGCTAT 983851 33 100.0 32 ................................. AAGTGAGTTAGATAAAGATACTCTTTCGGCCC 983916 33 100.0 38 ................................. CGCGCTACCATACTATAGGAACATTACATCTCTACATA 983987 33 100.0 36 ................................. CGCCCTCACCCCCGACGCAAGCGGCAAGTACACGAT 984056 33 97.0 32 ................................T CTGACCGATAAGGAACGTGAGATCCTCCGTAG 984121 33 97.0 35 ................................G TATAATGGACGTGAATCCCGGATATACGGCCTCTG 984189 33 97.0 34 ................................C GCTATGTCATTAAAAGCACCTCCGAACGAATCTC 984256 33 97.0 33 ................................C TTGTTTTATACGGGCGATGTGGTCTTGGTATAC 984322 33 100.0 33 ................................. TTTTAGATATGATGGCCTTGGCGCTCTCGGGCG 984388 33 97.0 33 ................................C TTGAAAGTAAAGATGCCTGAGCGTTTTGACCGA G [984399] 984455 33 97.0 33 ................................T AATATGTGAGGAGCGTAATACATATCAATAATC 984521 33 97.0 33 ................................C TATGCCAAGCATGTGGCGTTAGGGCTTGACTTT 984587 33 97.0 34 ................................G AGTACAGTCTTGTTGTTAATACTTTTCCTAGAAG 984654 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ====================================== ================== 20 33 98.3 33 GTCGCACCCCGTGTGGGTGCGTGGATTGAAACA # Left flank : TGATAATTATCCGGTATTTCTAATAAAATGATTTACGATTATGCATATTCTTGTGACTTATGATGTGGATACTACGAGCAAAGAAGGAGCTCGCCGCCTACGACATGTGGCTAAGGCTTGCATAGATTATGGCCAAAGGGTACAGAATTCTGTCTTTGAGTGTGAGGTGACAGAAGCACAATATTGTCTCTTGATTGAACGAATCAAGCGTATTATTGATATGTCTCTTGATAGCGTTAGATTTTATATTCTCAATAAAAACGAAAATAAAAGGGTAAAAGTGATAGGTGTTGAAACTGCTTACAAAGTTAATAATGCTCTTATCATATAATTTATGCGAATGTGGAGTATTACGAAAAAAGTAGTATTTTCGCACCCCTTAATAATTAGCAGATTAACCCGTCTATAAGGCGATTGCAGCCATTAAGCTGAAATAAAAATGAGAATTCGCATATTAATAGGTCTAATTTATTGACTTATAATATGTAACTTTGCACACT # Right flank : ATTTGTAAAGCGCAAGCTTTTTCATAAAAGATATACTTACGTGATGAAGTATATCTTCTATGGGACTTGAAGTGTTCTTCTGCGACGAAGGGATTAGTACTTCGTAAAAATAACTTTTTAAAGTCACTGACACTGACATATAATTTCGCTTAGTTATTTCTGCAAAAATCATTCATATGTAAACAAGTTTCGTATATTCGCGACCTTATAATAGTTTAAATATGGCAGAGGAACTACGGATTAAAAATGGTGATAAACAGGAAATGTATGAGACGTTGCTCCCGCAAATCGCCTCATTGGTAGGTAACGAGACCGACCTAATCGCTAACATGGCGAACATCGCCGCAGCACTCAAGCAGACTTTCGGTTTCTTTTGGGTAGGTTTCTACCGGGTCATAGACAATCAGTTGGTATTAGCGCCTTTTCAAGGCCCTATCGCCTGTACACGAATCAAATACGGAAAAGGGGTATGCGGCACGGCTTGGAAGGAGACCCGTACG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGTGTGGGTGCGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.20,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 4951713-4950897 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072210.1 Parabacteroides distasonis strain CL11T00C22 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 4951712 47 91.5 30 A......C.......................GA.............. TTCTCTGCGTTTTGGTTCAATGCGATTGCA 4951635 47 100.0 30 ............................................... TTTGTGCGCTACCAAAAGGCCCTGTCCCTA 4951558 47 100.0 30 ............................................... TCAGATTGAGTTTATGACCAAGCTATACGA 4951481 47 100.0 30 ............................................... ACCTTTTACTATTGCCATATTGTCTCCTCC 4951404 47 100.0 30 ............................................... GGCGGCCGTGTCGTCCCCTACCCTACCTCC 4951327 47 100.0 30 ............................................... TTGGAAGCGCAAAAAGCATTAGACCCGGTA 4951250 47 100.0 30 ............................................... GAATTGACGGATATCCGACATCTCCGGTGG 4951173 47 100.0 29 ............................................... CAATGGACACCTAACCTTCATGCCCATGT 4951097 47 100.0 30 ............................................... CTCCGCCGCATCCTCAATGACCGGAATCCC 4951020 47 100.0 30 ............................................... CAGCAATTATTGTTAGACTATATTCCTATA 4950943 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 11 47 99.2 30 GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Left flank : TCTAAACGCTTGGAGAATCGATTATTTCGAGGCAAGGTACGACTTGCTTCCAAATTCGAAAATATTTTTTCACAATAATCTATTGAACAACGCATTACAAATTTTCACTGATTTATTCTAGCGAAAGATTTCGTCTTCTGTCAACCTCAGTCGGACAAACAAGCGACTTTTTATCTGAAAACAATAAGCTTTTCATCCGAAAACAATCGGATTTCCGGTCGGAAACAATAAGGATCGCAGTCGAAAACAGCATACAACGCCGTTATAAACACCTTACTATTGGATCATAATCCCTCTACAAAGCCTATTCATACACTAAAAAATGGCGAAATACGCTGTTTCCGCCTTCCTTTTCTCTCTATTTTCGCATTTCCATAAAAAGCCTTTATCAGCTAAAAGTCTCCATTTTGAGCAAAATGACAGAAAAAGAGATATTTTGATGACATAAAAGAGAATGGCTTACTTTTTGGTGTAGCTGCCCCAATATTTTGCAATATTTT # Right flank : ATATTATCTATTAAAAACTATTAATCAATGGATTACAAAGCACATCAGAATAAAAAAAACAGATATTGTTTCCATTAAAAATCCCGCTTGACAGCGGGATTTTTCTTTTAGAACAACTCCAATTGCTGTCCAGGAGTATTCACTTCCACCGTTTTCTTTCCATAAAAAAGTTCAATATTCCCAAACTGCTTATCCGTAATACACATGATTCCGACATTCCCATGCTCCGGAAGAAAAGATTTAACTCTTTTTACATGTACGGCCGCATTCTCGCTACTAGCACAATGGCGGACATAAATAGAAAACTGAAACATCGTAAATCCATCTCTTTGTAGATTTTTCCTGAAATCCACATACGCCTTTTTCTCCTTCTTCGTCTCGGTAGGCAAATCAAACAACACAAGTACCCACATAACACGATATTCGCTAAACCGATCCATATTACATTTCCGGATAGGAGATTCTACGCAATTCGCCACTAAAGCACTTATACAGAGAAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //