Array 1 4582143-4580894 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015849.1 Streptomyces sp. SAT1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4582142 29 100.0 32 ............................. TCCGTGACCCCGCCGGGTTGGGGCTGGACGGC 4582081 29 100.0 32 ............................. GCCGAGGGGGGCCTTGAGGGTATGGCCTATGA 4582020 29 100.0 32 ............................. GCCCGCCGCTACCCGCTCACCCCGCACCGAGG 4581959 29 100.0 32 ............................. CCGCGCGCCATGAGAGGGGTGACGCTGCGCCC 4581898 29 100.0 32 ............................. CCCGGCCTGCAGGACGTCGTGCTGCCCAACGG 4581837 29 100.0 32 ............................. CCGGTCATCCTCGACGTGCCTCCCGTGGGAAC 4581776 29 100.0 32 ............................. ACCACCATGACCACCAGCGCCGCCCCCGCGCT 4581715 29 96.6 32 ....................T........ GACCCGGCGACGCTACTGTCCGCCGTTGAGCA 4581654 29 100.0 32 ............................. CGGGCGTCCGTGGTGTCCGCGGTGATGTTGTG 4581593 29 100.0 32 ............................. ATCAACCCGGAGACGTTCGGGCCCGCTGAGGA 4581532 29 100.0 32 ............................. TTGGGGTGTTCTGAGGCGGGATCAGCGGCGCT 4581471 29 100.0 32 ............................. TACGTGGCGGTGAGCCTGGAAGACGGGTCCGG 4581410 29 100.0 32 ............................. ATCAACGACCACTCGGTTGACGCGTTGCGCTA 4581349 29 100.0 32 ............................. GCATGGTGGGCCGAACACCCGCGGCTGACGCA 4581288 29 100.0 32 ............................. GGGTTCGGGAGCCCGGAGGCCCCGGCCACCTG 4581227 29 100.0 32 ............................. CGCCGAGAGAAGGTCTCCCGCTGGGAGAGCGG 4581166 29 96.6 33 ............................A GGCATGATTAGTGATGTCGGAAGGGGATGGCAG 4581104 29 100.0 32 ............................. CTGAGGCAGCCCGGGGTTTCGTCTTTGCGTCG 4581043 29 100.0 31 ............................. CAGGCCGGGCGAGAGAACCTCGCGACCCGCC 4580983 29 100.0 32 ............................. GCCACGCTTCAGGTGCAGGTGGACGCGCAGTT 4580922 29 96.6 0 ..................A.......... | ========== ====== ====== ====== ============================= ================================= ================== 21 29 99.5 32 GTGCTCTCCGCGCGAGCGGAGGTGGTCCG # Left flank : CGAGCCCACCAGTACCGAGGCCGGCTCCGGCCAGACCACCACTGCCAGCTGCGGCAGACCGATGGGAGGCGCGATGCACTCATTCGCGTCCGCCAGCCATGTCATCGCCCAGACCACCTCGCACGAGAGGGCCGCCAGCCGGGGTCCATGCTCGGGATTGACCGGGATTGATCCTGGTCAGGAGCGGATTCGCGTCGGCACCGTGCAGTTCAGAACTGTCGCACAGGTCGGTTACAGCTGGGACATCGCGCCGAACGGGATGAGCGGCCCATCGACATCGAGAAACAGCAGCGCGCGCTGCGCGGAACCAGTCACGGAAGCGCGATAGCGCGATCGGTCAGCGTGCTCCTGGGTTGACGAGGACAAGCTGACCAGCCACTCCTGTCCTCTGAAAGTCGGCGCCGACTACAGTGCATGCCATGCCTGCCACTCACTTGCCAGCGAGCACCACCCCCGGCAAAGAAAGAGCAAAGCCCTTCTGATGCTGCAGGTCAGGAAGG # Right flank : CCCTTGAACTCGCCCAGTTCGGGAACGCCGAAGCTCCAGCTCTTCCGGGCGGGCGTGTGCGCCGGGGCCTCGCTCGCCAGGTGCCGGAGCCCGAAGCCCAGCCTCCCTGGCCCCCCGGCCTCGCCGCTCCCGCCGCCCCGCCATCCGCATCCTCAGCCTCATCCCCAGCGGCAACCGCAACCGCATCCACAGCCACAGCCACGCGACAGCGATCCGCGCACCGGAAGTCACTCTCCGCACCCCCGACTCACCCCTTGGTGCTCGTTGATCGTCACCCCCTCGCGCTCGCGCCCCGCTCGAAGGACACTCGTAGGCAAAGGAGTTGCCGCCGGAGGGGGACGGGACATGCGGGACGCTCATCGGGCGGAGGCCGAACGGCTGCTGGTGCGGGCGGTGGAGGAGGAAGTACGCCGGTCGGGCGGGCGGGTGGACGGTGCCGTGCTGCTGTCGCGGGCGCGGGCCGGGCTCGACGCGCTGGCGCGGCCGGCGCAGGAGGAGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4592855-4591417 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015849.1 Streptomyces sp. SAT1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 4592854 29 100.0 32 ............................. TCAGCCACACCGACCGAAGGATCCTCCGATGC 4592793 29 100.0 32 ............................. ATCTCCTCGGCCCGGCGGTAGGAGAGCCGGGC 4592732 29 100.0 32 ............................. CATGCGGGTCCAGTCGCCGTCCTCGACGGCGG 4592671 29 96.6 32 ............................C CTGGTCGGGGGTCAGGGTGTGCATGCTCGTCC 4592610 29 100.0 32 ............................. TTTGTCACCCTCGCCAAGGCCGTCGACATGTC 4592549 29 100.0 32 ............................. CCGCGTCGCGGTGGCTGGCGGAGACGGGGTCG 4592488 29 100.0 32 ............................. ATCCTCGGGGAGCGCCGACCGACCGGCTGGGT 4592427 29 100.0 32 ............................. GACGTCGAGGGCTGGGACGCCACCCAGAAGCT 4592366 29 100.0 32 ............................. CTCTGACTGAGGTGGTCCCGCCGGACGATGCG 4592305 29 100.0 32 ............................. CATGCGGGTCCAGTCGCCGTCCTCGACGGCGG 4592244 29 96.6 32 ............................C CTGGTCGGGGGTCAGGGTGTGCATGCTCGTCC 4592183 29 100.0 32 ............................. CCGCGTCGCGGTGGCTGGCGGAGACGGGGTCG 4592122 29 100.0 32 ............................. ATCCTCGGGGAGCGCCGACCGACCGGCTGGGT 4592061 29 100.0 32 ............................. GACGTCGAGGGCTGGGACGCCACCCAGAAGCT 4592000 29 100.0 32 ............................. CTCTGACTGAGGTGGTCCCGCCGGACGATGCG 4591939 29 96.6 32 ............................T TCCAGGCGTTCGGCGGGGAGGCCCGGGTGTCC 4591878 29 100.0 32 ............................. GCCCTGGCGCGGGACATGCCCAAGGGCACGGA 4591817 29 100.0 32 ............................. GAGCAGCTTGTACGGCTTGGCGGCGACCTGCC 4591756 29 100.0 32 ............................. ACGGCGGCGACACCAACCTGCCCGCCCGGTGG 4591695 29 100.0 32 ............................. TCCACGACCGGCTGGTACCACGCCGGGATAGC 4591634 29 100.0 38 ............................. TAATAGGGGGGTCGAGACACCACTAGGCACGGGCCGCC 4591567 29 100.0 32 ............................. TTCGACTTCTCGGACATAAGGGTCATGGAGCC 4591506 29 100.0 32 ............................. CCGGATGGGACGGCACCCCGCCGGACGTGGTC 4591445 29 96.6 0 ...................G......... | ========== ====== ====== ====== ============================= ====================================== ================== 24 29 99.4 32 GTGCTCTCCGCGCGAGCGGAGGTGGTCCG # Left flank : CGATGACGGAGACGAGGCGGTGGCGAACCCCTTCTGAATCCGACGCCGACGGCCGTCCACCGCGTCGAACCGCGCGGGACTCCTGTCGGTGACCGTGGGGTACCGCGCTCTTCCGACCCATTGCAACGACAGGATCGCACCGAACCCATGCCCCTTGCCCTGCCCGCCTCATGCCGCACCACGACACCGAGAACACCCTCGCGATCCGGCGAACCTCCGCCCCTCGCACATCACGAGGCACAATCTCGCCCGGTTCGTGCACCTCACCTCACAACAAGCCCGCCCGGTGGCGCAACGGGATGAACTGTCCGGCACTCAGTCACGCGGTGCGATCGGTCAGCTTGCTCCTGCATTGACGAGGACAAGCTGACCAGCCACTCCTGTCCCCCTGAAAGCTATCGCCGTCTACAGTGCATGCCATGCCTGCCACTCACTTGCCACCGAGCGCCACCCTCGGCAAAGAAGCGGCAAAGCCCTTCTGACACTGCAGGTCAGGAAGG # Right flank : GTCGGCGAGATGTGGTTGCGCTCGATGCCGTCCGGCAGAACAACCTCCCCGCCCTTCACACCCTCGCCGCGGGCATCGAGCGCGACCGCGACGCCGTGAACGCCGGCCTCACCCTGCCCTGGAACTCCGGCGTGGTCGAAGGACACGTCAACCGGATCAAGATGCTCAAACGCCAGTGTTCGGCCGCGCGGGCTTCACGCTCCTCCGCAAGCGAGTCCTCCTCGCGTAACAACCTGCCCGAGCATCACGAGCATCCAGATTCTGGTCGTGGGAGTCGCGTGAGTGCCAGGATGCGTGTCGAAGCGCAGACGGATACGGAGGGGAACGTATGCGCCCGACGTTGACAATGCGTGAGTGGAGTACGCGGCGCAAGGTGACTACTGCTGCAGCGCTGCAGATGCTGTGACTGGGTGTGCTGATCACCGTCCTGATCACCTGGGGCCTCTCGCTCTCCGTCCCCGTCGCCATCGCTATATGGGCCGGACCGGCCTTGGGAGGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 4606458-4604721 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP015849.1 Streptomyces sp. SAT1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4606457 29 100.0 32 ............................. GAGCGGCACATCGCCGCCATGGACCGTGGGGA 4606396 29 100.0 32 ............................. GACCAGGAGAACGCCCCCCGCGAGTTGGTCGG 4606335 29 96.6 32 ...T......................... GTGCGCTGCCATGACTGCCCGGCGTCGGACAT 4606274 29 96.6 32 ...T......................... GAGTCGAGACCCGATGGACGTCACCGCCCGCA 4606213 29 96.6 32 ...T......................... TCGCTGTTCAGGGAGCGTCCGCCGCGGGGCTG 4606152 29 96.6 32 ...T......................... TGGATTGCCGTCCACTCATTTGGCGCGCGCGG 4606091 29 96.6 32 ...T......................... AGGGCCCGCTCGGCGGCGGCGCGCAGGGTGTC 4606030 29 96.6 32 ...T......................... CCGCGGCGCAGCCGGTCGCCCTGGTCCCGCGC 4605969 29 96.6 32 ...T......................... TGCCGGTCGAAGGCATGCGCGAACTTGAGCGC 4605908 29 96.6 32 ...T......................... TTTCAGCACGAGGTCTTCGTCGAGCGTGAACG 4605847 29 100.0 32 ............................. TTCTTCAGTTCCAGGCGGGCGGCTTCTTCGAT 4605786 29 100.0 32 ............................. GCCCCCGACGGCACGGTGGTGGAGGGCTGCTT 4605725 29 100.0 32 ............................. TGCGTGACGACCGGCGACCCGCACCGCACCTC 4605664 29 100.0 32 ............................. GAACGCGGGCCGACAACCGCGGTGAGGCCCAC 4605603 29 100.0 32 ............................. CAGGCCGCTGAGGCTGCGGAGGCCGCCCGGCG 4605542 29 100.0 32 ............................. TGCTGGTATGCACGACATGGTTTCAAGCGTGC 4605481 29 100.0 32 ............................. GCCGACTCACCCGACACCGAGACCCCGGCCGG 4605420 29 100.0 32 ............................. GGCGTCGGTGACGCGGTGCGCTCAGCGGTGGT 4605359 29 100.0 32 ............................. GCACCTGTGGACGGAGCCGAGGGCCCCTGTGG 4605298 29 100.0 32 ............................. TACCTGAACCGGCCGAACCTCTATCCCCGTCA 4605237 29 100.0 32 ............................. TGGGGTGCGTCGCTGGCCCGCCGCCTGGAGGC 4605176 29 100.0 32 ............................. ATCGAGGAGGAGTCGAAGGATGTCGACGCCGC 4605115 29 100.0 32 ............................. GCGATGCCCAGGTCGGTGACGCACCGGGCGAC 4605054 29 96.6 32 A............................ GAAGTCGGCGGCAGCGCCGATTTCCTCCGGGG 4604993 29 100.0 32 ............................. TACCGCTTCAGCGTGTTGAAGCTGCTTATCCG 4604932 29 100.0 32 ............................. CTGCGGGCGCGGGCGGTCGCGGACCAGGCGCG 4604871 29 100.0 32 ............................. TGCTGAGCGATCTCCGAGTACCCAGGGGTGTC 4604810 29 100.0 32 ............................. TCCTCGCTGACCTCGATGGCGAACGGCCGCGT 4604749 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 29 29 98.9 32 GTGCTCTCCGCGCGAGCGGAGGTGGTCCG # Left flank : AGATCTCACGCTCACTTGCCCGAGCACGAGTTGCTGGTGGCCGAGGTCGTGCCGCCGGTCTCGGAGACGACCGGTCCGAAGACGCTGCACAGCACCACGAGGAACGAGCCCGCGACGAACGTGAGAGCCGGTACGGGCGTCGGACACCTTCACATTGATCATCGTCTGGCCGATAGCGGCGCAACCGCCCATGCCGACGACGAACCCGGTGACGATATTGGCGATGCCCCGGCCGATGGACTCGCGGCCCTTGAAGAAGCCGATGTCGGTGCTGCCGCCGAGTCGCTGCGCTCCCGCAACGGGTCAAGCACCCTGTTCGGCACCCGACCACGCAGAACGATCGGTCAACGTGCACTGACGGGACGAGCTGACCAGCCACTCCTATGCGCTGAAAGCGAGCGCCGTCTACAGTGCATGCCATGCCTGCCATCCACCTGCCACGGAGCACCACCCCCGGTAAAGTAACAGCAAAGCCTCTCTGACACTGCAGGTCAGGAAGG # Right flank : GCGTCGTCGCTGCGCTGCGGCGCCGGGTAGATCATCACCCCAACCGGCGACAACCACGGTCTCGTCCTGCTGCTGACGGTCATGCCGCCGCACGACTGGGGACGGGTGTGGATCGGCGCGGGCGTCACCTCCCTGGCCTGCCCAGCCACCCCGGGAACGGCAGTGACCGGCGCAGGTGACGGTCGTTGGACGCGTTGTCACCCAAATGGTGCCACCCAGGAGGTCTTGCACGTCCATGGCCGCTATCTGCCCCAACTGCCACAAGCCAGAAGTCGTCACGTACATCGTCAACGACGAGGGCATCCACCCGTCACCGTGCCTGGAGTGCAGGGCCAGCACCATCACCTCTGGCCCGTACGCGTCCCTGACCGGGGCGACGTCCTGCGGCACCGGCGGGTGCGCCGGATCTGTACGTGATGAGTACTCGTACGACCAGCAGGGGCGTCTGCGCTCCTGAGTCAGGACGCAGTGCCCGCGCTGCGGGACGCTCAAGACGAATG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGGTCCG # Alternate repeat : GTGTTCTCCGCGCGAGCGGAGGTGGTCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //