Array 1 270991-271554 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMVR010000001.1 Enterocloster bolteae strain 1001302B_160321_D9 NODE_1_length_575847_cov_24.8808, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 270991 32 100.0 35 ................................ AATATGGAACTTAATGCCATAAATGCAGTTCCCAT 271058 32 100.0 33 ................................ AATCAATTCCCCGGTTTGTATGAAAATGAAACC 271123 32 100.0 35 ................................ TTATGCCAAAGAAAATAGTACAGCATCCATTACAA 271190 32 100.0 35 ................................ AAAAACTGACAATAGAAAAATTGCAGATACTTCTG 271257 32 100.0 34 ................................ GCTGAAGCCATTGGGAATATGGTTATGGGAAGAA 271323 32 100.0 35 ................................ TCTTCAAAAGCTATATCAGAATCATTCGGGGGAAT 271390 32 100.0 35 ................................ GGTCATAAACATCTGCCAAACCGGTGAATGTATAC 271457 32 100.0 34 ................................ GGAGAAGAACGTCCGTATGTGCGGGCGGAGACGA 271523 32 90.6 0 ........................T.....GT | ========== ====== ====== ====== ================================ =================================== ================== 9 32 99.0 35 GATCAGGCTCTCGCGAGCCTGCGGATTGAAAC # Left flank : GAAATGAGGTGATGGATTTGCTCGTACTGATAACCTATGACATTAATATTACTGAAGCCGCAGGGGCGCGACGTTTAAGACGTGTAGCTAAGCAATGTGTAAATTACGGTACACGAGTGCAGAATTCTGTTTTTGAATGTCAAGTAGATGCAACGCAATACGCGAAGCTAAAGCATCTTCTGTTAAAGGAAATTGACGAAGAAAAGGACAGCTTGCGTTTTTACTCGCTGGGTAATCATTACAATGGTAAGGTTGAGCATTATGGCGTACGGCGTGGAATACAGGTGGATGAGCCCTTGATTTTATGAAAAAACGGAAAGAATATGTCTGGGTTTGGCCGTGCGAACCCTAAGTGAACATAAATTCTGTGGGAGGTTCGCACCTGGATTTTAGGGTGAGTTGGAGGATGGTTTGTATAAAGAGGTGAAAAATATTGTGATATTTGGTTGATTGCAATAAAAATGTAATGTGTAAATGCTTTGAATTTGTAAATGTTTGCT # Right flank : TTTCAGTATTGAAATTTACACAGAGTCGGCCTGATGTAGGAGTCAATTTTCCTAAAATTTAAAATAGTTTGAAATTAAAGTTCAGGAAGGTAAAGTGTAAAGTAATTCACTACAATCAATAAATGATTATTACTATTGGTTTAAAATGAATAATGACTGTAGCATTAAAGAATATATGCACAGCGTAAGATATATGGATTATACAATTTTACTTATTTCCGATGCGTATCTGAGGTCTAGAAATTGCATGTATGAAGTTTTGGAACTTATGAGAGACCGTATGTATAAAAATAAAATCTTCCCCGCAGTTGTGTCAAAGGAAATATATAACCCTGTAGTAGTCGCGAATTATGTAAAGTATTGGCAGGATGAACAGCAGCAATTAGAGGCGCAGCTGAGTAACCTGCGGATTCAGTATTTAGGAAATTTGAATCAGAAACTGAAAATGATTCAGGATATAGCCTCTAATACCGCTGATTTCCTGGATTTAATTGGTGATA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCAGGCTCTCGCGAGCCTGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA // Array 1 185298-185062 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMVR010000002.1 Enterocloster bolteae strain 1001302B_160321_D9 NODE_2_length_552629_cov_27.4916, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 185297 33 100.0 34 ................................. TCTGTCCCATTCTCTAAATCTCCTTGCGTTCCTG 185230 33 100.0 36 ................................. TTATGCGCCACATAGGGTTAATATCGGTCATACCGC 185161 33 100.0 34 ................................. AATGAAATGATGTCGCTTGTATCAACATCATATA 185094 33 78.8 0 ...C..................CA..CCA...G | ========== ====== ====== ====== ================================= ==================================== ================== 4 33 94.7 35 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : AAGTTCTGGAACTACCTGAAAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAGGCGGGAAAGCTGGCTGCTGTAATGGAACGTCAGGGCAGAGTACTGCGTATTTGCGATGCCGAAGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGAGCCATATATCCGGAACAAAAGAGGCTTGTATTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCTTTGCAGCATGCAGGATATATGCGGGAAATGAAGGATTATGTAATATATAAGTAGAGTTGGTTTCTGTGAGTTGGGAGCCCTTCAAACCAGGTGCGAATGCCAAGCTAACATGAAATGCCAGGGAGATTCGCACCTGAAAAACAGAGGAAAAGGCCGTGAAAGCGGGCTGGGTGAATGGACTGAATTGGTTGAACTGGGGAGAGAAGAGCATAGTGCATAAAATGTTAGGGGGGATGTGGAGTAGGTTTGGATAATTTTGCT # Right flank : ATACCTGTAAGCCCCTAAATTAATGCAAAAGGAAAATTGCTCCCCGCGTACCTAATGCATTGAAAGCAGCCATAATTATATATTGAGAATTCGCAAAAGTACAGTTTACAAGGGACTACACAGGGTAATGGTCTGACGGGAGGTGTGCTACCCGTCAGATTTTCCATGTGATGTTCAAGCTGTCACTCGTGGCAGCTACGGTGGTAACCATTAAATCCACCACCCGCCGCTTGTCGTCAAAGGATACATTGTCCCATGTGTCGAGGTAGCCGGAAATCTGATTGACCTGTTCCGGGCTGATGGCTTCCACCGTCAACTCGGCTATCTGCTTCACAAGTTCCTGCTTGCGTCCGTCCAGTTCCGCTATCTTCACATTCACATAGGAGAGCAGGACATTGTTTGCGCCCGTCAGACTGTCCACCAGCTTTTCAATCTCGCTGTCCACATGGAGAAGTTCCACTTGTAGGGCGGCGATTTTCGGGTTTGCCTTTGCCACTTTC # Questionable array : NO Score: 8.60 # Score Detail : 1:0, 2:3, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 45926-46364 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMVR010000004.1 Enterocloster bolteae strain 1001302B_160321_D9 NODE_4_length_440747_cov_32.6473, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 45926 33 100.0 34 ................................. TGGCCCTGCAGTACCTGCATGTCTTTGGGGCGGG 45993 33 100.0 36 ................................. AAAAGTGCCTGCATACCATCATGGAGGGCCGCTGTC 46062 33 100.0 35 ................................. AAGTACAAGTTCATTATCATCTGTGATATGAAAAT 46130 33 100.0 34 ................................. AAAGAGCGGTTTAACCGGACGGGGTGAGTTGTAT 46197 33 100.0 35 ................................. GTATATGATGATTGCCATTGGATTAATGGCATTTG 46265 33 100.0 34 ................................. CTCCTCGTCCTCCTCGTCCGGGTCGTCTAAATCT 46332 32 75.8 0 ............A.-A...A..CAA.C...... | G [46362] ========== ====== ====== ====== ================================= ==================================== ================== 7 33 96.5 35 GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Left flank : TGCTGATACTGATTACATATGATGTGAATACGGAAACCGCTGCAGGCAGGACCAGGCTGAGAAAGGTTGCAAAGCAATGCGTTAATTACGGCACCCGCGTCCAGAATTCTGTATTTGAATGTATTTTGGATAATACCCAGCTGATAAAGCTAAAAGCCATACTGACAGATATCATTGATGAGCAGACTGACAGCCTTAGATTTTACAACCTGGGAAATAAACACACTACAAAGGTTGAACATGTTGGGGTGAGTAAAGGGATTAAAGTGGAAGAGCCGCTGATATTCTGACCTGGCTGCGGGCGGTAAGGAGGTTTCAAATAGTTTGGTGCGAACCTGAAGCAAACATGAATTTACGGGGGGATTCGCACCGGAAAAACTGCACAGTGAAAACGGCTTTGGATGTGTGCAGGGTAGGTTGGCGGTGATTTGAGGGAGTATGATGTGATTTGATTGTGGAAATGTGATGAAGAATTGTTGGTTTTTTTGTGTAGTATTGCT # Right flank : TCCGCCAAATTCAGGATTACGTTTAGTCAAAACATCATTCCCCTTTTTCTAAGAAAACAGTATAGTTTGAATCATAAACATTAGCTATAACTAACAACACGCAACAAGAAAGGTGGGCGAACACCCACCTTTGCCATAAAACTGTTATAGGGTATAAAGAACGCGGGCCTCCCTCACCCTTTCCATGCCCGAATCTCTCTAAGCCCCGGCACCAGAACCTTGGCGCTGGTTTCCAGAATAATCCGTCCTTTTTCAGCCGTGGCGCCTGACGGGTCTCCGCCGATTCCTATGGGTTTGCCGTCTGCTGTTTTCCAGTCCTCGGACACCCAGCCAATGGATACGTTTCCATAAGGCCTCAGTGCCTGATTGTCTTTAAATGCAGTTGGAATTCCTGCCTCTGAGGTATCTAACTTTACCAGGGACGGGTCCACGGCCATGACCATGGAGGTTTCCATCTCGCCTCCATGGAAGTCCCAGATATTTCCCTCTGAAATGGTGGC # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.90,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //