Array 1 1429575-1426595 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT635457.1 Actinomyces pacaensis strain Marseille-P2985T chromosome contig00001 Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 1429574 36 100.0 28 .................................... GCAGCGTCATCGCCCCGAGCACGCGATG 1429510 36 100.0 28 .................................... CACGGCACACCTTGTGCCCATTCAATCC 1429446 36 100.0 28 .................................... GCGCTCGTGCGATCTGCAAAGAAGTGCG 1429382 36 100.0 28 .................................... TCGTCCTTGTAGCGTTCGATCTGGTCCG 1429318 36 100.0 28 .................................... TGATTTCGAGTCCGTCGGCCGTGTCTTT 1429254 36 100.0 28 .................................... CGACTCCGATCTCATCGATGACCTGCGA 1429190 36 100.0 28 .................................... CATCGTCACGCTCGGTATCACCGTCGCG 1429126 36 100.0 28 .................................... CGACGCGATCGTGAAAGAAGCGACAGGG 1429062 36 100.0 28 .................................... AGATCCGAGACCTCGAAGCAGGTCAGCT 1428998 36 100.0 28 .................................... GGAGTGACTGTCGGATACATCATCATCA 1428934 36 100.0 28 .................................... GACCTTGTAGGCGGTGATCGCGTCGGCG 1428870 36 100.0 28 .................................... TGGCTGATTCTTGGAAGGCTGCTGGGGT 1428806 36 100.0 28 .................................... CCAAGCGCAGGATAACCTCAATAGATCA 1428742 36 100.0 28 .................................... GCCGCCGATGCGTGCGGGGTCAACGCAA 1428678 36 100.0 28 .................................... CGTATTCGCGGGTTAAGAGTTGTTCGGT 1428614 36 100.0 28 .................................... GATCCAAGCGGCACGCGCGGGATTAACC 1428550 36 100.0 28 .................................... ATCAGGCCGCAACCTTGGCCCTAATTAT 1428486 36 100.0 28 .................................... GCAGCTTTTGCAGGGCTTGGCGGATGGG 1428422 36 100.0 28 .................................... ACTTAAAGAAGTCAAACCGCCCCTAACC 1428358 36 100.0 28 .................................... GGTTGATTCTAGCGAAGCGGGCGGATGG 1428294 36 100.0 28 .................................... AAAGCATTCGAGAGCTGAGGCATCGACT 1428230 36 100.0 28 .................................... TGCAGCGGTTATTTACGAAGGATTGTCT 1428166 36 100.0 28 .................................... ACTGCATCCGAGACGTGGAGGTGGAGCG 1428102 36 100.0 28 .................................... CGGGCGGTTCCTTCTTTCCAGACTTGCA 1428038 36 100.0 28 .................................... TGCCGCTTATTGGCATGATGGCTTCTGG 1427974 36 100.0 28 .................................... CCGGGGGTGGTTATAAATCTTTCGATTT 1427910 36 100.0 28 .................................... TCGCGGATGGTATGCAGCGCCGAGGTCA 1427846 36 100.0 28 .................................... GTTCATATTGAGTTGGATTCTGAGGTTG 1427782 36 100.0 28 .................................... AGAATCGCGGCGTGACGCACTGCCCTTT 1427718 36 100.0 28 .................................... GGTCGGCGCCGAGGCCGATCAGCTCGTT 1427654 36 100.0 28 .................................... CTTTTTGTGTTCCCTAGAGGCGGGCGAG 1427590 36 100.0 28 .................................... CTTGGCCCCACACTCCACAAACCCCAAC 1427526 36 100.0 28 .................................... CAGCCTCGATGACCTCAAGCAACTGCAT 1427462 36 100.0 28 .................................... TAAACGGCGCGTAGCAGAGCAAGGAACC 1427398 36 100.0 28 .................................... GCTGAGGAAGCGGACGATCTTGCGTGGC 1427334 36 100.0 28 .................................... GGATGCTAGTAAGGTTGACGAGTTGCCT 1427270 36 100.0 28 .................................... CCCGCCAGGTCGCGCTCAGCCATGCCTT 1427206 36 100.0 28 .................................... GCGACGATCTTCGTCCTAACCGCAGGCG 1427142 36 100.0 28 .................................... CGGGCGACCTGTGGTTTAGGCACGTGGA 1427078 36 100.0 28 .................................... TTATGCGCGGGGAGTGGCGCGCCGTAGC 1427014 36 100.0 28 .................................... GTGAGTCGCGCGGCCTCGATGGTCCCCA 1426950 36 100.0 28 .................................... CTAATACCATTTTCTCAGACATCTCGCG 1426886 36 100.0 28 .................................... TTGATTCCGGGGAACAAACCGCTCAATG 1426822 36 100.0 28 .................................... CGCTTGGCGAGGCAATGCGCGCAGCCGG 1426758 36 100.0 28 .................................... GCCAGATGCTCGCACTCAACGGTGCGTG 1426694 36 100.0 28 .................................... TGCAGCGTGTTCCCCACTGCCTATACCC 1426630 36 75.0 0 ....................ACTCG.A....AG..G | ========== ====== ====== ====== ==================================== ============================ ================== 47 36 99.5 28 GAAGTCTATCAAGAGGATTGGTAACTGATTCCCAAC # Left flank : TTCCTACATTTTGGGGCCGACGATCTCTGCGGATGACTGGTGCAACGCCCTGATCGATCTGGAGATTCGTCCCGGCCGTGATGTCTCGCTGGTAGCCAGCGGCTGGTCTGCCGAGCGCGCGCACTGCCTATTCGATGTCGATCACTTTGATACGCGCCCCGGCGAGCTATTGAGGCGTGCGGTTGAAATGTTGGTCGCCCAAATTGATGGCGAGCCCCAAAAGGAAGCGGCCGCGGAAGCTGTAGCCGCCGGTTCCGTGACGTCGGCAGATTCCGAGGCGAAGATCCGCCGCCCTGTGCATGGTCTGACCCTGCTTGATCCGATCTTCGTGCCCGGAAATACGGTTGTTGGGGCAGATCGGACATAGCGTGAGGCCGCATGTAGGCTTCAGTTTTTCTTCCGTAGATGCCGAAAAGTGCGAAAAATAGCGTTCGGGGCTTCGAATTTTAATCGTTCGAAGCCCCGAAAACCTTGCTATTCCAAGGGAAAACCAATCCTCT # Right flank : ATAGTGAGCTGCTCAGGAGCCCCCTCCGTTTTCTGTTTCTTAGCCTGTTCAAAATGCAGTCCCGTGGCCCATTGACGGTCAGTAATACCGATAACCCGCACTTGACCGCCTTCGGGAAGATGCGACTGGATTTGTCGAAGGGTGGAATGGTTCTGCCCACCGCTTGGCCAGTATTTTGCGTAAACACTGAACTGGACCATTGTGAATCCCCAATCCAGCAACGCTTGTCTAAACCGCGTCGCTTCCCGCCTCTGGGCTTTTGTTTCAACCGGAAGATCAAACATGACCAGGCACCACATGGGACTATCCACCATCTCAACCACTCAGATCAGTGGATGCGGGTCCCTGCCATGAGGGAACTTTTAGACGCTCTTCTTCTCCTTCAACATAACGCCCGTATTGCTGCGCAAGATCTTGGGCAACTGCTGAAATGCCGTAACCAACCGCATCGAACTTCTGTGAAGCCGCAGCAACCAATACCCGCTTCACATCACTATCTG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTATCAAGAGGATTGGTAACTGATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //