Array 1 228671-227906 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007766.1 Campylobacter peloridis LMG 23910 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 228670 36 88.9 30 AA.AG............................... TAAAGAAACTTTGGAAGCTACAGCACATAT 228604 36 100.0 30 .................................... AGCCAAATCAAACTGCAAAGCTTATCAAAG 228538 36 100.0 30 .................................... TAAATCAGTTTGTGTAAGGCGTGTGATTAT 228472 36 100.0 30 .................................... GATAATCATAAGCTTTTAAAGAAGTTGAAA 228406 36 100.0 30 .................................... TATTGCAGAGTTAGCTGAAAAACTTGCTTA 228340 36 100.0 30 .................................... TGAAGTTAAAGTTAGTGCAAAAGGCGTTTT 228274 36 100.0 31 .................................... TCAAAATCGTCCCATAACAAACGATAAGGCA 228207 36 100.0 30 .................................... TTTAAGTTGTTTTTGCTAATTAACATATCT 228141 36 100.0 31 .................................... GGAAAAGTTGTAGGTATTGAATTTACTTTCA 228074 36 100.0 30 .................................... AAAAAAAATGGGGATGATGGAGCATATCCA 228008 36 100.0 31 .................................... TTCCTTTGGAAAAAATAGAGGCAAACGATTA 227941 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 12 36 99.1 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : CAGGAACCTTTGGAACGATAGCAGCATTGATTCCTGCATTTTTTATTTTGCGGTATTTAGGCATAGGAACTTTGATTTTACTAGCAATTTTGCTTTTTTTGGTTTCTATAAAAATCATTGATCAATACGAAAAGCAAACAGGCAAACATGATGATAAACACATTGTTATAGATGAAGTTGTTGGGGTATTTTTAGCCTTAGCAATTTGCGGACAAAGCGTTTTTACTTTTTTGCTTTCTTTTGTTTTATTTAGATTTTTTGATATCACAAAACCATCTATCATCGGTAAAATCGATAAAAAAACCAAAGGTGGTTTAGGTGTAATGCTAGATGATGTTTTAGCAGGAATTTTCGCAGGATTATTTAGTGCAGTAATTTATGGAATTTTACTTAAATTTAATCTTTTATGGTTTGATATAAGCATTATGGAGATATTTTAATTTTATATTTTCACTTTAATTTTTACGACAAAATGCAAAAAAAGGGTAACTCATAGTAAT # Right flank : ACACTTTTACCAAATAAAGAAAATTAGATGTTTTTCTGGGTAAAGATATCTAAAATTATGTTATAATTTCGCCAAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTTGGTTATCCACGCAGGGTTACAATCCCATTAAAACCATTAAAATTCAAATAAACTAGGTTGTTTAAGTTTGTTTGTTTTATTTTGTTTATTTGTTTTTTCATTACTATATTTAAAATCTTGAGTTTTTTCATCATATTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGAAACTCCACCTAATAAAATTTGCATATTATCAAATTGTTTTTCTGTTATAGTTAAAACCCTTATATTTCCATAAGGTGGTAAAATTTTTTCTACAGATTTTATCGTTGTTTTTGCCGAAGTTAATCCTTTGCAAATTTTTACATATACACTAAATTGCATCATAAAAAATCCAAGTTTTATTAATGAAGTTCTAAATTTGCTCGCATTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.56%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //