Array 1 365747-365583 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH601090.1 Megamonas funiformis YIT 11815 supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 365746 31 96.8 35 C.............................. AGAGAAAGTAGTTCATGGTAGTTTATCTGATTTTA 365680 31 100.0 36 ............................... GAGTTATTTTTGAAGATGAGGATAATAAAGTATCCG 365613 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ==================================== ================== 3 31 98.9 36 AATTTAACTTTAACAAGAGTTGTATTTGAAT # Left flank : AGGTTCAGGTTGTGCTATTTCCCAAGCTTCCACAGATATCATGATTGATTTAATGCTTGATCAACCAATCGACAAAGCTAAAGAATTATGTCGTTTATTTATTGGCATGGTTCAAGGCACAATCACTGATGAAAAAGAGCTTGCCCCTTTAGATGAAGCTCTTACCTTTAAAAATATATCCAAAATGCCAGCTCGTGTAAAATGTGCCGTACTTAGCTGGCATACTATGGAAACAATCCTAGACAAAGCCCTCCAAAGCTCTCAATAAATAAAAAGTATCATCTTGATTTAAATAGTTCAAAACTAAAATTAAGATGATACTTTTTTATTTTATCTAAAATTTACCAACCAAAATCAAGAAAAATCTCGCTAATCCTTGATAAATAAACATTTTCACTAAATCCCTTCAAATCTCATTATTGCTGGTAAAAAATAAGTAAAATCCTTGTTTATCAACACTTTTAATAGTACAATAAAATCATAAAGATTAATTTTTCTAG # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAACTTTAACAAGAGTTGTATTTGAATTCTGTAGCTTTTTCCACTATAAATTTACCTTTTATCATTTAACTTTAACAAGAGTTGTATTTGAATTCTGTAGCTTTTTCCACTATAAATTTACCTTTTATCATTTAACTTTAACAAGAGTTTAAATTAAGTAATAAAAGAAAGCCTTTAAATATAAGTATTTAAAGGCTTTCTTTTTATAAAAAATCTCTAAAAAACACATAAAACTCTTTAAAAATTAAATAGTAGTCAACAAATAGACAACATTCATCACATATTTTAGATTAAATCAATAGCTTCTTTTAATTGTTCAATAGTTTTATGTGTATAAACTTTTTCATTAATGGTTTTCCCTACATGTCCTAATATTAGATTTTTTATATTTTCTTTTA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTTAACTTTAACAAGAGTTGTATTTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 935137-934906 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH601090.1 Megamonas funiformis YIT 11815 supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 935136 30 100.0 36 .............................. TCATTTTTATTATAAAGATGGAGAACACAAATGGTT 935070 30 100.0 37 .............................. AGAGCTACTAAATATTTAAAAAAGGTGGTAATAACTA 935003 30 100.0 38 .............................. AGAAATTCTAATATATATTTATCTTCTTGTTTTCTTAT 934935 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 4 30 100.0 37 ATTCAAATACAACACTTGTTAAAGTTAAAT # Left flank : AAATAATTATAACGCTAGTTAAAACACAAGTTGTATGGCGGATTCAAATACAACACTTGTTAAAGTTAAATACACAAGGCGCTATAGCGTCATAGATTACTGACCCTATTCAAATACAACACTTGTTAAAGTTAAATAACGACTGCCTTTTTGTGCGTTCTGATAAAATTTGATTCAAATACAACACTTGTTAAAGTTAAATATTACAAAAAAGAATGAATACATCTTATTTTAATGCATTCAAATACAACACTTGTTAAAGTTAAATGCTTCCGCAAGCGTCTGGTTTATGTCTTTGCTTTCTGATTCAAATACAACACTTGTTAAAGTTAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATACAACACTTGTTAAAGTTAAATGCTTCCGCAAGCGTCTGGTTTATGTCTTTGCTTTCTG # Right flank : GCTAGAAAAATCAATCTTTATGACTTTCATTATACTATTAAAAGTATTGATATACAAGGATTTTAGTTATTTTTTACCAGCGATAATAGGATTTTTGGAGATTTTATAAAAAGGTTTAATTTTCAAGCTTTAGAGGAGTTTTTCTTAATTTTAGCTGGTAATTTTATGATAAATAAAATTTTATTAAGCAAAAAACAAAAAGCAACTATCATTGATAGTTGCTTTAATTTTATAAATCATATGGTGACCCACCCGGGACTCGAACCCGGAACCTGCTGATTAAGAGTTAAAGCATAACAATTTTATACATAAAATAAAGCCTTTGACATCATAATATTATTAAAATGTGTTTTTTTCGGAGAAAAATAATGTTATATAAGGTATTATATTTAGCTATATATTTCACAACATGATGTCAGCATGATGTCAAATATGATGTCATTTTTGAACACGATTATTAAGAAAATCAGCTATAGTCTGTTTCATCTGTTCGGTTTTGT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCAAATACAACACTTGTTAAAGTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 3 935926-935302 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH601090.1 Megamonas funiformis YIT 11815 supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 935925 30 100.0 35 .............................. GATGTGGATTTATTAGAAATAGTTGATTTTCTAAA 935860 30 100.0 34 .............................. GAAGAAAGAACCAAGCTATATAAACCACTTTCAC 935796 30 100.0 37 .............................. TTGGGTGATTGCTATGGTCGTGAACGTGTAGACTACA 935729 30 100.0 37 .............................. ATTGGGTAGATGATAGTCAAGGCATAAACATATTATT 935662 30 100.0 37 .............................. AATTATAACGCTAGTTAAAACACAAGTTGTATGGCGG 935595 30 100.0 36 .............................. ACACAAGGCGCTATAGCGTCATAGATTACTGACCCT 935529 30 100.0 35 .............................. AACGACTGCCTTTTTGTGCGTTCTGATAAAATTTG 935464 30 100.0 36 .............................. ATTACAAAAAAGAATGAATACATCTTATTTTAATGC 935398 30 100.0 37 .............................. GCTTCCGCAAGCGTCTGGTTTATGTCTTTGCTTTCTG 935331 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 100.0 36 ATTCAAATACAACACTTGTTAAAGTTAAAT # Left flank : TTCTAAATAAAAAAAGGCTTTTAATAGAAGACAAAATCTATTAAAAGCCTTTTATAATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATACAACACTTGTTAAAGTTAAATTAAGGGTATCGAAAGCTTTATTATGACGCAATGTCA # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATACAACACTTGTTAAAGTTAAATGCTTCCGCAAGCGTCTGGTTTATGTCTTTGCTTTCTGATTCAAATACAACACTTGTTAAAGTTAAATTCATTTTTATTATAAAGATGGAGAACACAAATGGTTATTCAAATACAACACTTGTTAAAGTTAAATAGAGCTACTAAATATTTAAAAAAGGTGGTAATAACTAATTCAAATACAACACTTGTTAAAGTTAAATAGAAATTCTAATATATATTTATCTTCTTGTTTTCTTATATTCAAATACAACACTTGTTAAAGTTAAATGCTAGAAAAATCAATCTTTATGACTTTCATTATACTATTAAAAGTATTGATATACAAGGATTTTAGTTATTTTTTACCAGCGATAATAGGATTTTTGGAGATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCAAATACAACACTTGTTAAAGTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 4 1120514-1119828 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH601090.1 Megamonas funiformis YIT 11815 supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1120513 30 100.0 35 .............................. TGCTCTTCGGAAGTTTCTTTTAATAGCTTTTGCCA 1120448 30 100.0 35 .............................. TGTAGCTGGGTTGAACGTGTTGCAGATAATGTATT 1120383 30 100.0 36 .............................. TTACTTGGAGATTTAAATGGAACATCATCATAAGAA 1120317 30 100.0 37 .............................. TAAAAATCTACGTGTAATTGCCACGCTAGATAATTAA 1120250 30 100.0 34 .............................. TTTAACCTCCAATTCTGTTTTACGCATTAACTCA 1120186 30 100.0 36 .............................. CCAGTGAAGAAAATTTCACCACCCCATGAAGATATT 1120120 30 100.0 34 .............................. AAAAAGGAAAAGATGTCGTTGATAGAAAGGTTGA 1120056 30 100.0 34 .............................. ATAGTCGTGAATTAAATTCTATCAAACTATAAAA 1119992 30 100.0 38 .............................. TAGAAAATGACGATATACTTAATATAGACTTTTACGGA 1119924 30 100.0 36 .............................. TCTGTTTTATCCTGACCGCATGGATCGTGATGAAAC 1119858 30 93.3 0 ..........................A..A | T [1119830] ========== ====== ====== ====== ============================== ====================================== ================== 11 30 99.4 36 GATTAATAGAAACAAGAGTTGTATTTGAAT # Left flank : GGTATGGCAAGTAGCAAAAGCTGTAAACATTCCAATCATTGGTATGGGCGGTATTGCAAGTGCAGAAGATGCTATTGAATTTTTGCTTGCAGGTGCAACAGCAGTCGCAGTGGGAGCACATAACTTCATTGATCCATCAGCATTAAAAGTAATTGCAGATGGTATCGCTGAATATATGCAAAAACACAATATTGAAGATGTAAATGAACTTGTAGGAGCATTACAAGCTTAAATAAAAAATTACCAAGTGAATTTTTACTAAATAACCTATAAAGCTAAGAAATATAAGCTTTATAGGTTATTTTTTTATATAACTAATAAAAATCAAAATCAGCTGGTAAAATTTTTTTATATCCTTGAATAGCAAGATTTTAGAGACTATAATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATAAATATAGG # Right flank : AAAACTTATTGACAGTGGATATAGTTTGTGATATATTAAGTTATGTTGTATTTGAGATGCAACGTATTCCACAAGAAGAAGTCACCACTTCTCACCTTATGGCGTGCTAGTCACTAGGGTTACTAATTAAAACAAAAACGTTTAACGTATATTTTAATTTGTAATATCAGAGGGTGACGTGCGTCATCCTCTTTTTTGTGTATATAATAAAAATAATATATAAATAATGAGGTGTTTTCTATTAGTAAAGAAACTTTAAGAATTAATGGCGAAATCCGCGCTAGAGAAGTTCGTGTGACAGATGCTCAGGGAGAGCAGCTTGGTATTATGTCTACAAGAGATGCTCTTCGTAAAGCAGAAGAAGCTCATTTAGACTTAGTAGAAGTTGCTCCAAAAGCAAAACCACCTGTTTGCCGAATCATGGATTTCGGAAAATATCGCTATGAACAACAAAAACGTGAAAAAGAAGCGAAGAAAAAACAGAAGGTTATCAGTGTAAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAATAGAAACAAGAGTTGTATTTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 5 1240576-1241001 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH601090.1 Megamonas funiformis YIT 11815 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1240576 30 83.3 36 T....TA.....T.T............... ATGGGTATGTGCCAATGAAGATTATGATTGTATAGG C [1240578] 1240643 30 96.7 36 ..A........................... ATTTATCACTAATAATAGTCGTGTAAAGTATTGTAG 1240709 30 100.0 35 .............................. TAATAAAAAAAACACTTGCATATATTTAAAAAGTG 1240774 30 100.0 36 .............................. CGTTATCGGTTTTGTAATAGGTGGCGGTGAACTTAC 1240840 30 100.0 37 .............................. CAATAATAGTGATATTAAGGTGGTAATGATTAATGGC 1240907 30 100.0 35 .............................. AATTGGTGCATAGGATTAGAAGCATGAACACCTAA 1240972 30 93.3 0 ............................NN | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 96.2 36 GTTTTCGTACAGCACCTGTTGATATTTATC # Left flank : TACAACTTATCTATTACATAGTCAAGAAAAAAGTTTACATATTTACATGTTTTTTACTAATAAAACAACTTTTTATGCTGATTATTCTATCTTTATAGCTTAATAAATTATTATAATAAGGATAAAATAATATTTATTTTATTTAAACTTCGCCAATAATGTAAAATAAAATATCTAATAAATTTTATCATTGTAAAACAAAAAGCCGCAACCTTTTAATAAAAGGCTACGACTTTATTTCTTAATTATTCAGCATATATTTTTAATCAAATTTCACCTTATTTTTATCTTTTTCCTTCCTATATAATATAGGCTATTTTATATTTAAATATTTCTATTTTTTTCTGTTCTTTTTATAATAGTACGTTTTCAGTACGTTAATTTTAACCGCCATATATGAATATAACAAGATATCAATTAGTTTTGACTAATAGTTATATATCAAAATATGGCGGTATTTTTATTAATAACCGCCATACTCCAAATAATACATATTCAAT # Right flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTTTTCGTACAGCACCTGTTGATATTTATCAATTGGTGCATAGGATTAGAAGCATGAACACCTAAGTTTTCGTACAGCACCTGTTGATATTTATCTGGTATTTTACAAAGAATAAAAGAAAATATTCCTGCGTTTTCGTACAGCACCTGTTGATATTTATCTAATATGTATTCTCTAAATGGATTTTCTAAAAAATTGTTTTCGTACAGCACCTGTTGATATTTATCCCTAATGTTATTAGGATTTATTAATTACATTATAGTTATAAACTATTAATATTGCAAGACTTTAAAAAGATTTACCAGCAAATGGCAAATATTGGTTATAAATCTATAAAGTTAGTAATCACAGTAGTTATTAAGATTTTATAAAAAATTAGCTGGTAAAATATGTGCATCA # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCGTACAGCACCTGTTGATATTTATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 6 1241102-1241328 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH601090.1 Megamonas funiformis YIT 11815 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1241102 30 100.0 35 .............................. AATTGGTGCATAGGATTAGAAGCATGAACACCTAA 1241167 30 100.0 36 .............................. TGGTATTTTACAAAGAATAAAAGAAAATATTCCTGC 1241233 30 100.0 36 .............................. TAATATGTATTCTCTAAATGGATTTTCTAAAAAATT 1241299 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 36 GTTTTCGTACAGCACCTGTTGATATTTATC # Left flank : TTATCATGGGTATGTGCCAATGAAGATTATGATTGTATAGGGTATTCGTACAGCACCTGTTGATATTTATCATTTATCACTAATAATAGTCGTGTAAAGTATTGTAGGTTTTCGTACAGCACCTGTTGATATTTATCTAATAAAAAAAACACTTGCATATATTTAAAAAGTGGTTTTCGTACAGCACCTGTTGATATTTATCCGTTATCGGTTTTGTAATAGGTGGCGGTGAACTTACGTTTTCGTACAGCACCTGTTGATATTTATCCAATAATAGTGATATTAAGGTGGTAATGATTAATGGCGTTTTCGTACAGCACCTGTTGATATTTATCAATTGGTGCATAGGATTAGAAGCATGAACACCTAAGTTTTCGTACAGCACCTGTTGATATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC # Right flank : CCCTAATGTTATTAGGATTTATTAATTACATTATAGTTATAAACTATTAATATTGCAAGACTTTAAAAAGATTTACCAGCAAATGGCAAATATTGGTTATAAATCTATAAAGTTAGTAATCACAGTAGTTATTAAGATTTTATAAAAAATTAGCTGGTAAAATATGTGCATCATCAATTAACATAGTAATATTGAGCCACCATTAATTTAAATTTTTCATTGATTGATACCAAAGTTAAAATGATACGATATATACTATAAATAATCTCATTATCTTAAAAGCTGATGTAGTTTTAAATGACTGCACCAGCTTTTTTTATTTTACAGAAATAGTCATCATCTTTGGCGATATTCTTAGTTATTACAAAATCACCTATTTTTATAATATTCCTCATGACCATTTTATAAAATTACTAGCTTTTGTAATATCTATAAAATAGACTCACTCTGATGAACGCTTATATAATTTTTACATATCTTTTAAAGCCTTAATTAGAGTT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCGTACAGCACCTGTTGATATTTATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //