Array 1 12981-13938 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAFEMS010000043.1 Priestia megaterium strain RIT 807 43, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     12981	    32	  90.6	    32	....A........A.......T..........	TTAATTCTTAAATTAAATCCTAAAAAAATTAA    	
     13045	    32	 100.0	    36	................................	TGGAATGGGAACTAAAGTAATGGCAAACGAATTCGT	
     13113	    32	  90.6	    35	......C.......A.G...............	TAACAAATAATTAACCTTCAGGTTCCATTGTGTAC 	
     13180	    32	  90.6	    34	....A........A.......T..........	ATGCAAGCTTTTTCGCCCTTACGTACTATGTAAC  	
     13246	    32	 100.0	    34	................................	TCTCCCTTTGTTTTATAAGATAGTTTCATACACC  	
     13312	    32	  96.9	    34	.....................T..........	TAAATTTGATTTATCTAAACTATCCGATGAGGAG  	
     13378	    32	  93.8	    34	...................C.T..........	CAGTTACGTTGTAGTTTAATAGGCTCTAAGGAGT  	
     13444	    32	  96.9	    35	....................C...........	ATCTATAACTAATTGATGAAGAAGTGGATCGCCAT 	
     13511	    32	  96.9	    34	.........C......................	TGGTGTAAATACAATAGATCATTATAAACGAAAA  	
     13577	    32	  96.9	    34	.....................T..........	CACTAATAAAACATAAATCATAACCATTACTTAC  	
     13643	    32	  93.8	    34	A.............A.................	TAAATGCATTAAAGCTTTATTAAGTTCATTAACT  	
     13709	    32	  93.8	    33	......C.........G...............	TGCTATTATAGTGTTTTCCAAATTCCTAAAAAA   	
     13774	    32	  93.8	    34	.............A.......T..........	ATGCGACGATAGTCTTTTAACAAAGCCTCGACTG  	
     13840	    32	  84.4	    35	A............A.T....AT..........	CGATAGTTATAGATTCGATAATAAGAAGGCGTCAG 	
     13907	    32	  90.6	     0	...T.........A.T................	|                                   	
==========	======	======	======	================================	====================================	==================
        15	    32	  94.0	    34	GTCACATCCTACATGGATGTGAGGATTGAAAT	                                    	       

# Left flank :   GCCTAGAGTATGGAAGGAAATCAGTAGTCAATAACGAAATAGAATACAAACAGCTAGAATGTAACTTAAAGTAGGTCAATGTTTAAATTCGATATTGCAATTTGTTTGGACAAGTGGTTTAAACGTTCCTTGAAAATCATATAAAGCAGCCAGTTTACGGGCTTGGGCGAATTTGCGTCCAAAGGGTGAGGCCAGGTGTAAGTAAGAACCTACAAAAGCACTCACCAAAGGGTCAACTCGATACATTATGTTACCGTATCGACAATCCAGTAAGCGTTACAAAGTTTGTCGTAAACCTTAGAAGCTGAGGTAACGCAAAATACATACTTAGTGCGAACGTATAGTAAACATGAATTTACGTAGGGATTCGCACCTCGATTTACTTGAAATACCTTTCGATTTTAGTCAATCCTTGTTATTGACTAAAGAAATTCCAGTACATGCTTTAAGATTTTTAGTTAAAACTATATGTTATTGTATTATTTTGGATGAAAATCGCA
# Right flank :  TATGTTGTATGTAACGCTAATGAAGTGATATAATCTACTCAAAATATTAGATATAGGATAAAACTTATCGAAAAACCGCCATTACCGGAGTAAGGCGGTTTTTTGTTGTGGGAGACAACAAAAAACCAGCATCCCGTCATAACGAAATGCTGGTTGAGTATTAGTTGTTTTTCAACTTGTAGCCTTTGAATTTATACCCATATACGTTTGTAAGATCCACAAAGCTTTTATAGGAATAAGTAATCGCAACCGGTGTACCTACTTGGACTTTATCATAAAGCTTTTCGATGTCTGCATTATGCATTCTCACGCAACCTTGACTCACATATTTTCCAATGCTACTTTCATTGTTATTGCCGTGAATGCCGTATGTATCACCATACGTACCGTTTGCATTTAACCCTAACCAACGTTTTCCTAACGGATTGCGAGGATCGCCCCCAGGAATATGTCCTGTATAGTAAGGACGGTTTTTAATTTTGTTCACGACTTTAAAAAAG

# Questionable array : NO	 Score: 5.18
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.22,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCACATCCTACATGGATGTGAGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:59.38%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.70,-5.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [9-15] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : NA
//