Array 1 7076-5912 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUHE01000024.1 Butyricicoccus sp. AF15-40 AF15-40.Scaf24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =================================================== ================== 7075 23 100.0 48 ....................... TTCTTGCAGAAAATCAATCATATTCTCGCGGACAAATTAAAAACAACT 7004 23 100.0 48 ....................... ATCGTGACATAATTACGATTATTGTTAATAATGCGATTAAAAACAACT 6933 23 100.0 50 ....................... TGCAAAATCCGCAAACATACGATACAATAGTATCGGGATTAAAAACAACT 6860 23 100.0 49 ....................... AGTCTGCAACAGCCTTGTCAATCTTGCCGAGATTCTATTAAAAACAACT 6788 23 100.0 51 ....................... CTTACCATTAACCGCCGTTGCGCGGCTTGTAAAATTCAATTAAAAACAACT 6714 23 100.0 48 ....................... CCGCCGTAAATAGCGAACACGTCATCGAGCATAATATTAAAAACAACT 6643 23 100.0 50 ....................... TAATGTTCATGGTTTATTCTCCTCTCAGATTCGTTTGATTAAAAACAACT 6570 23 100.0 46 ....................... CGAACAGAGTGTTCACATAGTCAGCCTTGATAGATTAAAAACAACT 6501 23 100.0 48 ....................... CAAATTTTACATATTTCAATATGTATTCCTCTGCAATTAAAAACAACT 6430 23 100.0 49 ....................... TAAATCGCTGGAAGTTTACCAGCCTTGCCGTTTACCATTAAAAACAACT 6358 23 100.0 48 ....................... TTTCCATCTTCTGTCTTAATGGTAGTAGTGCAATAATTAAAAACAACT 6287 23 100.0 49 ....................... GCAGGTCGGAAACACCGCCCAAAGCACCTTGAAAACATTAAAAACAACT 6215 23 95.7 47 ......................A GAAGCAGTACATCCCAGTGTAGAAACATTCATGTATTAAAAACAACA 6145 23 100.0 46 ....................... ATTAGAAAATACTCTGATAGTCGTAAAAGTTCAATTAAAAACAACA 6076 23 100.0 47 ....................... TTCACGCGCTCTCGTTGTCGTGCCGGTCAATGCCATTAAAAACAACA 6006 23 100.0 48 ....................... CAAGAATCATCATAAAGATTGCGTCAAGCTGAGAAATTAAAAACAACT 5935 23 95.7 0 ......................A | T [5914] ========== ====== ====== ====== ======================= =================================================== ================== 17 23 99.5 48 AATCCCCGTAAGGGGACGGAAAC # Left flank : CAGAACTATGATAAGTGCTTTTTAGAGAAATTTCCCTTGAACGGGATCAGCGGCGGTGGTAATCTATATTTAGGCGGCGGTTGCGGTTATGTCTCCAAAACGGTATCTTACCCGCTTCTGGGTGAAAATGGCGTGAAGTGTGTCAGTGAGATTATCAATGCAACAATCGCGCCGAAGGTTCGTGCGCAGCATAAGCACTACAAAGATGCTGGGCTTGGCGTTTCGCCGCATATGCTGAAATGCACTCAGTATGACGGCAGATTGTACGAAATGGGTGCATGCACCTTGTCAATTCAATAAATTTCCGCCGCAAGGTATTTCAAAGGGAATTTATATGCGTTATGCAGTTGATATAGCGCAAATTTGAAACAATTTTGTCGGTTAAAAAAGCGAACGCAAGATATTTTCGGGAAGAAACCGCTCGAAAATATTTTGCGCCGCAAACCGGCGAAAAACTCCTTGTGTGACGGGGGATTTTAAGGACAGGATTAAAAACAACT # Right flank : AGAAAGGCGGTGCAGTATGAGCTGTTTATACGTCAATGAGAGCGGTGCAGTTATTTCGGTCGAGGGCGGCTATTTCTGCGTGAAACAGAAAAACGGTTTGGTTCGGAAGCTACCGAAGGAACTGTTGGAAAGCATTACGATATTTGGTAATTCTTCGATTACAACACCTTGTATGCAGGAATGTCTGCGCCGCGGTATCACGCTCAACTATTTTTCGGGTAAGGGTGCATATTATGGCAAGCTCAGTTCAACCCGCCATGTGAATGGCGAACGGCTGAAAAGCCAGATTTATGCCTGCGATGATCCGGTATTCTGCCTGACAATGGCAAAGCAGATTGTTACAGCGAAAATACATAACCAATGCGTCATTTTGAGACGATATCGCCGCAATCGAATGTCAGATATCGATAACGATGAAATCAAGACGATGAAGCAGCTGGAGCACCGCGTTGAACGTGCGCAGAAAATTGATGAACTGATGGGCATTGAAGGAATGGCAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCCGTAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched AATCCCCGAAAGGGGACGGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 82251-83941 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUHE01000009.1 Butyricicoccus sp. AF15-40 AF15-40.Scaf9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 82251 32 100.0 35 ................................ ATGTCTTCCATGTTGTATGGACTTGCAATCATGCA 82318 32 100.0 35 ................................ TGCGACGAACGCACCACTCAGTCGCTTCGTAGAAG 82385 32 100.0 35 ................................ TCAAGAACTCCATGGACTGGCACAGGACCAACGAT 82452 32 100.0 34 ................................ GCTGCACAATAGCGCTTGGCGTAATACTTGCGTA 82518 32 100.0 34 ................................ TACGCCATTCTGGGTGATACGGACACCGCAACCG 82584 32 100.0 34 ................................ GGTAGACCAGACCGCACCGCTTGCGGGCAACCGT 82650 32 100.0 37 ................................ CGCATTACGCGCGTGGAGCATCACTACGGCGGTGCAG 82719 32 100.0 33 ................................ TACCATAATTTTTGGGGGGTAAAGGGCATTTTT 82784 32 100.0 35 ................................ GCCAGCGAGTGCGCCGCGTGAGTGGCGCGCCGCGG 82851 32 100.0 35 ................................ TGCCAGCATTGTAACCGCCGTTGCAGATGTTCTTG 82918 32 96.9 35 .............T.................. TGCGCTGTACTTGGCTACCTCCAAGATTGCCGAGC 82985 32 100.0 35 ................................ TACCGCTATGGCGGCTATTGTCGCTGCACCGGTAG 83052 32 100.0 34 ................................ TACCGCGCTTACTGCACTGTGTAATAGCCCGTTG 83118 32 100.0 33 ................................ CGCGAAGCGTTTGAAGGTGTGCCGCAGGTGACC 83183 32 100.0 33 ................................ GAGCAGAATACAAATTCCTTGTAATAAGTGCCG 83248 32 100.0 35 ................................ ATTTTGTTTGCTGGTGTGCGTACAAGTCCGGTGCG 83315 32 100.0 33 ................................ CATGTCGCGCTGCAGGAGGCGGACACGGACGGC 83380 32 100.0 34 ................................ CCTTGCGGGCAATGCGCCGGTGATGGCGGCAAGT 83446 32 100.0 33 ................................ TGAAAATTAAAATTTATGGGTGCGGGCTTTAAG 83511 32 100.0 34 ................................ TCAGCAGTGCACCAAGGGCGACGATGTGTTTGAG 83577 32 100.0 36 ................................ GTAATTCTACGGGTGGATTGAGTGGTATAGCTGATT 83645 32 100.0 35 ................................ ACCGCCCACAGCAAAGGAATGTGATGAAGCTGCTC 83712 32 100.0 34 ................................ ATCAAACAGATCCTTGGCAAGTCTAAGGGCAACT 83778 32 100.0 33 ................................ TCTACCGCAGGCCCGGTCAAGGCCGGTGATGTC 83843 32 96.9 35 ............G................... TTGATGAGCAGACCGGGTTTCTTGGTGTTCTCGAT 83910 32 93.8 0 ............G....G.............. | ========== ====== ====== ====== ================================ ===================================== ================== 26 32 99.5 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : TTTGTGGAAATGAGGTGTCGAATATGCTGGTTGTGATTACTTACGATGTCAACACCGAAACAGCCGCCGGGCGCAAACGCCTGCGGCAGATTGCCAGGCAGTGCGTCAATTATGGACAGCGTGTGCAGAATTCCGTGTTTGAATGCCTGATTGACGCGGCTCAGTGCCGTATGCTGCAACAGAAGCTGTGCACCATTATGGATGATGAACTGGACAGTCTGCGATTTTACTATCTCGGCAACAAATATGAAAATAAGATTGAGCATTTTGGTGCGAAACGCGGCTATGAGCCGGAAGGCGTGCTTATGGTGTAAGGCGGTGCGAAGTGCAAGCAAACCGAAAAGTGTCGGCGCTTCGCACCGTAATTTCCGATAGATTATATACAATAGTTTTATCGAATGTCAAATTTGCAATTGTGTTTTGCACGAATCTATGCAAAACTGTTATTGTAATTGTTTATTTTGTAAAAATCATTGGGGATAGTCTTGGTGATTTTTGCT # Right flank : TGGCGGTGGTGTTCGGGGCTTCCTGCTCTCTGATGTCGCTCCCTTCACGGGATCGACACAGATAGCCGCACCACCATCCTCCCGTCCAACATCGCCCGATCTCTATCCCTCACAATCTTTCACCCGCCCGACCAAAACATTTGCACATGTCATGACACATGTGCTATAATAACTCCAATACCGCTATTGACAGCGCCGCACAGATTGTTGCGGCGTTTTGCCGGGAAGGAGAAAAATCAAATGAAAGCATACTTTGACAGCATCGAAAAGGAGGTTCCGAAGCAATTACAGCAGGTTTTCCTTAATCGCCGCGATACGGCTGTCATTACGATTGACATGCACGATGGACACCTGTCAACCGACCCGGACTGTCCATGTCCGTCTCCGCGAGGACGCGAGATCATCGAACCGCTCAATCATTTCATGAACGAAGCACGCGCGCTCGGTCTGCCGATCATCCATGTCCGCTCAACGCTGCGTAAGGGCGGCGCAGACGAAAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //