Array 1 999269-996896 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACII02000003.1 Ruminococcus sp. 5_1_39BFAA acpfZ-supercont2.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 999268 30 100.0 35 .............................. TTCTTACATCTTTCATGTTATCAATTCCTTCCTTA 999203 30 100.0 37 .............................. AACGTCATTGTGTCCACAAAATCACTGGCTCTTTCTA 999136 30 100.0 34 .............................. TAATTTCAAGTTCATCATAGGATGCGAGGAACTG 999072 30 100.0 36 .............................. ATCAAGAAGGTACTGAGCTTCTTGATACTGTCTGGA 999006 30 100.0 34 .............................. ACTCGCCTGCATTGTACGGATAGTAGTCTGCTGG 998942 30 100.0 36 .............................. GAAACAAAGAAAGCATTCTGTCTGGAATGCAAGTAT 998876 30 100.0 34 .............................. AATGTTGTGCCATCCTTAAACGTTGCGCGAATAG 998812 30 100.0 36 .............................. TTATTTTGTGTTAAAAAGCAATGCCTAATTCCCTCA 998746 30 100.0 35 .............................. TAGCTTTATCCTCCATTATATTCTCTGTATAGTTG 998681 30 100.0 36 .............................. ATTTGAATAATTGACTTATCTTTTTTATTTACATAA 998615 30 100.0 34 .............................. AAAGAATATACCATTTACACGAGGTTAATAGAGG 998551 30 100.0 26 .............................. AACCATCGTCTCTAGGGTATGAACCT Deletion [998496] 998495 30 73.3 37 AGC..G..A...AGA............... TTGCTACAGTTCGCTCCGGCCCCGGCAAAGCAGGAAT GT [998486] 998426 30 100.0 36 .............................. CCAGATGCAGCTGATAACTGTTTCTGTACGAAAGCC 998360 30 100.0 35 .............................. TATACTGGAATCCGAACTGGTTCTGAATAGTGATC 998295 30 96.7 35 ............T................. TCATCAGAGAATCTTCCGTCCGGCAACTGTTTTGC 998230 30 100.0 34 .............................. AGGGAACTGTTTCCGCATCAGGAAACTATATCCT 998166 30 100.0 34 .............................. AAACCATTTCAAAAAAGAAAGTGATGACCAAACG 998102 30 100.0 36 .............................. AACTTTTTGATTTTATCCTGCACATCTTCTGGAATT 998036 30 100.0 34 .............................. CATAATATTACTATTATAATACCTCTGATATACC 997972 30 100.0 34 .............................. GTCCACTGTCAGCGATTTTGGAAAGTTCATCTTC 997908 30 100.0 34 .............................. ATCCGTCTGTTCTGTCGGTTGTCTTCTGCCTCAA 997844 30 100.0 37 .............................. ACCAATTTCTCTCTGATTGCCTCAAGGGTATTTTCTC 997777 30 100.0 36 .............................. TTCGGTTGAAAGTATTTATAATGTTTACTTGTCATT 997711 30 100.0 36 .............................. ATATTTTTACAATATCGTTTCATTATCAACAGGTTC 997645 30 100.0 35 .............................. AAAATAGATGCTCGACTAGTCCAACGGTAACCTGG 997580 30 100.0 34 .............................. AATACCTTTCCTGTAGTCGTTCTATGTACTGCAT 997516 30 100.0 35 .............................. CTGTCCGGACATTCTAATTTACATCTTCCCATTTA 997451 30 100.0 36 .............................. CAGAGTCGGCAGCAGTTAAAGCGTTTTGTGAAGCTT 997385 30 100.0 36 .............................. GAATTTGATATGGAGCCAAAGAAACCAGCAGCAAAA 997319 30 100.0 36 .............................. TGCAATATGTAATCCAGATATTTTTAATAATGCTTC 997253 30 100.0 36 .............................. AGTAATGATCTTTCCATCGTTTATTCCTCCTGTTTT 997187 30 100.0 34 .............................. TCGTTTCAACCGCTTATTATCCGTAATACTCCAA 997123 30 96.7 37 .............................T CTGCAGAAAGGGTACTGAGGGTACTGGATGGTCTTTC 997056 30 100.0 35 .............................. GCACATCTTTTGCGCCGTAGGTGTTACCAGTTACC 996991 30 100.0 36 .............................. AGTCTGTTTACAACAGACAGTTCTCCAATGGAACCC 996925 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 37 30 99.1 35 GATAAAGAGTAACATGAGATGTATTGAAAC # Left flank : TTTATGATGTAGGAGAAAAAAGGGTACAGAAAGTATTTAAAATCTGTAAAAAATATTTATCTCATTTCCAAAAATCAGTTTTCAGAGGGGACATGACGCCATCAAAATTCATACAATTGAGAAATGAACTGAATCGAGTGATAGATAAGGAAGAAGATTTTGTGTGTATTATAAAATTGATGAATGATAATGTGTTTGGAGAAGAAGTACTTGGAAATGGAAAAAAAGATAATGGAGAAGATTTGATTTTGTAGTAAAAGAATTCTCCTGTCAGTGTGAAAACATGACAGGGGAATTCCTTAAGTAAGTTAAATGAAAAGTTATAAAAATTACCAGGCGGATTTTCACAAAAAAATGAAAAATATTGAAAATACGGGGGTATACCAGGTTTTGATTGAGTAAATAAAAAATGAGATGTCGGTTGGTAAAAATCTTGCAATCCTTTGTATTTTGCTGTATTATAAAAACTGTTAGAAGAAGAAAAGCCTATAAAACGAGGG # Right flank : AATATAAAATGTTGTATATAATGGAATTGCTCTGACAATAACAAATATCCAATCCACAACTCATTTATATCTGTTAACATATAGCAACATAAGTATGGAAAATAGAGATTAACATAAAATACAATGTATAATATGTATATAGAACCGAGACAAAAGGGAGGATCATGTATTGAATTCAGTCAAAAAAAACTTCCAATAGGAATAGAAAATTTTGCAAAGCTTCAGGCGGAAGATTTCTACTATGTAGACAAAACGATGCTTATCAAAGAACTTCTGGATAATTGGGCGGAGATGAATCTGTTTACACGTCCGAGAAGATTTGGTAAAACACTGAATATGAGTATGCTGAAAGCATTCTTTGAATTAAACGGTGATAAGAACTGCTTTAAAGGAACAAGAATTTCCAGAGAAGTTTATCTTTGCGAACAATACATGGGAAAGTTCCCTGTGATTTTTATTTCCCTGAAGAGTATCAGTGCGCAAACTTATGAAAAAGCCTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAAGAGTAACATGAGATGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 2 2302415-2301014 **** Predicted by CRISPRDetect 2.4 *** >NZ_ACII02000003.1 Ruminococcus sp. 5_1_39BFAA acpfZ-supercont2.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 2302414 35 100.0 43 ................................... TTTTAGAAGCTTTATTATTTTGTAAACGCTTTTGCTATGTCAC 2302336 35 100.0 40 ................................... TTTTCTTTAATGCTATTATTTAGTTACAACCTATTAAATT 2302261 35 100.0 36 ................................... TGTTTATTCCGGAAGATATGCGGTACCTGAACACCG 2302190 35 100.0 34 ................................... TCAAATTTCTTGAATTCTTCATAAATGTAATCCC 2302121 35 100.0 35 ................................... TCTTCAAGATAATCTTTTAAATTTGTAGAACGCTG 2302051 35 100.0 35 ................................... TAGGTTAATCCGTAGCGTAACAAACCGCAAGTTTG 2301981 35 100.0 35 ................................... TAATCCCACGTAGAAGATGGGTAAATCAGGATTTC 2301911 35 100.0 34 ................................... TTGACGTTCTTCACATACTCACTCAATACATTTG 2301842 35 100.0 38 ................................... TCTGTCATTGCAGATTTCTTAACTAGTTCCCATGCTCT 2301769 35 100.0 37 ................................... TCACCAGTTCCTTTCTGTTGTTATAGTTAGTATTTCT 2301697 35 100.0 39 ................................... TCACGTTTATCATATGCTGATGTATCAACTTTACAGATA 2301623 35 100.0 37 ................................... TGTTGTGCGTGTTTCATTTCCTCACGTGCTGTTTCAA 2301551 35 97.1 39 ..............................A.... TTAATAATTCGTACAAAGATTGATAAAATTAATGCTCAG 2301477 35 100.0 35 ................................... TAATATTTAAAATATCGCCATACGGATTAATAACA 2301407 35 100.0 37 ................................... CTGTATTATAAAATTTATTTGAATTCACAGATTCACG 2301335 35 100.0 35 ................................... CAGTGAAAGTTTTAACCTTAGTGGCGGCATCTCCT 2301265 35 100.0 35 ................................... CCTGATTTAAGCATAGTATTAACCTCTCATTTTTC 2301195 35 100.0 41 ................................... CTGAAGCGACCGCACGATTGCTGAAGTCATTCTTGTAGTCA 2301119 35 100.0 36 ................................... CAAGAGTTCGTAAATTTCATCAATCTCTTTCTCGAA 2301048 35 97.1 0 .............................T..... | ========== ====== ====== ====== =================================== =========================================== ================== 20 35 99.7 37 ATTGAGAAATGTAGCTCCCCGATAGGGGACGGAAA # Left flank : AAAAAGAAAGACATTTTGGAAGCAGTACAGTTATTCTATGAACAGTATTATCAGAATTTCCAGAAGAAATTTCCGCGAAGTGACAGGAGAAAACCGAATACAGTATTTCTGGGAGGTGGAAGCGGTTTCGTTTCCAAGACAGTGATTTACCCGTTATTCGGAGAAAAAGAGGGCATTGAAACTGTAAAAAATATTTTTGACAGAACAAATGTACCTAAAACCCATCAACATTATAAAGATACCCGTATGGGAGTATCCCCTCATATTTTAAAATGTACAAGATATCAGGGAAAAGAATATATGATGGGGGAATGTGAATTAAATATTATTTGATCATTTTGTTCTTAAATGTGCAAAATACCGTATTTTGCCACGCATGGCTTAAATACTGGATTTGTGAGAACTTTTTACTTTCCAAAACGGCTGTATTTCAATGAAATTACTTTTCCCCCGCAATCCCCCTATTCGTCCCAGACAGGACATGGGGTTGCGGGGATGGT # Right flank : TTCGTATTCAAATTTAGAAACAGTTACATTTGGCAATAAAGTGAATTGTTACTAGAGAAACAGAGGTGATATCATGAGTCTTTTATATGTAAATGACAGTGGTGCAACAATAGGAATAGAAGGTAACTGCTGTACCGTAAAACAAAAAGATGGTTCGAAACGAATGCTTCCTATAGAATCTCTGGATGGAATTACAATTATGGGGCAATCTCAGATGACGACACAGTGTGCAGAAGAATGTATGCAGAGAGGAATTCCTGTAAGTTACTTTTCAAAAGGTGGTAAATATTTTGGCAGATTAATCTCAACAGGTCACGTCAATGTAGAACGTCAGAGAAAACAATGTGCACTCTATGATACAGGTTTTGCTGTGGAACTTGCTATGAAAATTTTAAGTGCAAAAATCAAAAATCAAAGCGTAGTGCTGCGCAGGTATGAGAAAAGTAAAGGTTTAAATCTGGAAGAAGAACAAAAAATGTTAGCTATCTGCAGAAACAAAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAGAAATGTAGCTCCCCGATAGGGGACGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //