Array 1 3215-2150 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXY010000014.1 Microcystis aeruginosa LEGE 91341 NODE_38_length_44443_cov_25.6052, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 3214 35 100.0 42 ................................... TTTGTCAGTCAGCCATACGTACTGACCAAGGGGGTGGTCGTG 3137 35 100.0 41 ................................... CCTTGTATAGAAGACTTGCCGGTCTAACTCATCCATATCTT 3061 35 100.0 35 ................................... GACTGAGTAACAGATTCGTTTAAAACTGTTATCTG 2991 35 100.0 42 ................................... CGCTGCTCCCAAGGGTCTGTCCATCCCAAAGGCAACCCGAAG 2914 35 100.0 36 ................................... TTCCTGTTTTTTTAGGAAGCGAACGATAAAACGATA 2843 35 100.0 40 ................................... CGAGCTTGATTGTAGGAACGCCAGAAACATTGAAATTAAA 2768 35 100.0 39 ................................... TCCGGTAATGTTTTTCATGTTGAAAAATACACAAGTGAA 2694 35 100.0 35 ................................... AGTGTTTGGCTTGGCGCTGTTCCAGTAATCGTAGC 2624 35 100.0 37 ................................... CAAGAAGTCCTCCGATTAAGGTCATGTTATCTACAGA 2552 35 100.0 41 ................................... CCCAAAAAGCCAATCACCAAAGCACTACAAACAATCGCCAA 2476 35 100.0 41 ................................... CATCGTGGTTAGCACGATATCAGCGGGTTCTGTGGAACCGT 2400 35 100.0 37 ................................... TTAAATACGACCGCGACCGGTGCTATCACTGCTAAGA 2328 35 100.0 35 ................................... AGAATAATCGAAATCAAAGGCTCAAAAGAGAAATT 2258 35 97.1 39 ..................................T AATGTGTAGGGTTAACTCATGAATTGACCCTACAATTTT 2184 35 74.3 0 T..AA........A..T...T.CC.....A..... | ========== ====== ====== ====== =================================== ========================================== ================== 15 35 98.1 39 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : TATTACGATTCATCAAGTTGGTCATCGTCGAGATATTTATTCTGATTAGTTTTAGTTTAATTACTTCCATTCCCAAAAATTGCTCCTTCCAAAAGCGATCGCACTCCCCATCATCAAAATCGCCAAAAAAGTTGCTTCTCCCAAAAGTGATTGCTATTCCTCATCATCAAAAAGCGATGTCGTCCTGACAATGAGGGACAGGAAACAGTACCCATGTAATTTTAATGGACAAGGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTTATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACAGAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTCATGACCGAGGTGACTATTGACAATTATTATTAATAATGTCTATGCTTTTCAGTATCCCACGAAAAATCGTTGTACAATCCTTGTACGGCCTAGTTTTGCAAAGCTAGT # Right flank : GATACTTAATTAAGAAAAATCAATAAAAATAAAGATTGTTTAAGAAAAATTATTTAAAATTAACACAATAATTAGAAATTTAGTGATAGATATAAAAGTACAAAAGAGCCAATTAATCTAACAATCCTATTTTTTTAGCCAGAGATAAGTCCTTTCTAGGTCTTTTCAAGGCTGTTGAATATACCTCTTAAACAATCGAGTTTTCTATAGCTTTATGCCCAAATATATAGCCATCACCTTCTCCCCCGTGCAAAGCTTTATTGAAAAATCCCGCAAATTGAGGGACCTGTACGGAGCCTCTCAGATTCTCTCGGATCTGACCAGTACAATCGTCACCCACCGGCCTGAGCAGTACCACCTAATTAGCCCCGGACTGCTAAACTCCCCACAGGGAATGCCCAACCGTGTTCTCCTGAAAATCGATAGCGAAATACAGTCCTCCTCCTCCGAGGACATCATTGCGGAACTGCAACGAGCCTTTTTAAATCGTTGGAAAAATA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 6101-5116 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXY010000014.1 Microcystis aeruginosa LEGE 91341 NODE_38_length_44443_cov_25.6052, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =========================================== ================== 6100 35 100.0 35 ................................... TTTTGATAGCAATCGATGCTTAGTTCCCAAACATT 6030 35 100.0 37 ................................... TTATTTCATTTCTGCGACCGCCGTCGCAGAAATGAAA 5958 35 100.0 36 ................................... GCTAAACAAGGCCACCTGCCACCCCTCGCGGAGTGT 5887 35 100.0 40 ................................... CCGTTAACCGGTATTGTCGCCCCTGCTGAGATGTTGAAGC 5812 35 100.0 37 ................................... TTTTACTGATCGAGGATCAACGATACGCCCACATCTT 5740 35 100.0 35 ................................... CTTCCCGTCCATCCAAGCTCTTTTCAAAAACCCTA 5670 35 100.0 41 ................................... CAATATCAATCGGCTTTTCTCCAAACTTTTTAGCACCTAAT 5594 35 100.0 43 ................................... AGTATAGGGAGTCCCGTCCGTAGCGATCACCGCCCGATACCGG 5516 35 100.0 35 ................................... ATCACAAACCCCGACAAAGCCAAGGTTCCTAGTAC 5446 35 100.0 37 ................................... GCTGTACCGAGGATTTGTTCAACGATAACATCACCGT 5374 35 100.0 40 ................................... GAAATACCTATGCCTCGAATTGCCCACGTTAGGGAACCAT 5299 35 100.0 40 ................................... ACATGACCAATAGGGTACGCATCGATGCTTCCGATGAGAG 5224 35 97.1 39 ..................................T AATGTGTAGGGTCAATTCATGAATTGACCCTACAATTTT 5150 35 82.9 0 T..AA........A..T...T.............. | ========== ====== ====== ====== =================================== =========================================== ================== 14 35 98.6 38 CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Left flank : ACGAGGTTTATATTGGTAGCGCCGATTGGATGACGCGGAACCTGAGTCGTCGCGTGGAAGCAGTGACACCCATCGATGAACCAGCGATCGCCAAGGAACTGGAAGAAATTCTCGGGATTATGTTGTCAGATAACCGACAAGCATGGGAATTACAATCCGATGGCAGTTATATTCAGCGTCGTCCTGACAATGAGGGACAGGAAAGCAGTACCCATGTAATTTTAATGGACAAGGCCCTTAAATCTGCGGGTATTAGTCCATAGGAACAGTTATCAGTTATTAGTTATTAGTTATCGGTTATCAACATTTTTCGCGGGTTAGACACAATGGCTGAAAATCTAGAGTTTTCGTTGAGGTGCGTCGATGCCTTGTCCAGTAAGGCTTTGAGCCTGATGACCGAGGTGACTATTGACAATCATTATTAATAATGTCTATGCTTTTCAGTATCCCACGAAAAATCGTTGTACAATCCTTGTACAGCCTAGTTTTGCAAAGCTAGT # Right flank : AGAATGCCAGGGATCAATTCCATCTCATCGGTTAAGAAAAATCCGAGATTTCAGCAGGATTATGCGTCAGTGGGGACAACAATTTCAGAGGAAGTTTAACCAGACTGAACTCGGCAGAATAATTTACGCGGGAGGAGATGATTTTTTGGGCATCGTTTATAATAGCCAATTTCCCGATCTACAACTCGATCGATCTCGATCGAGTTCTCCACTGGCTACAAACCCCTTATAAGTAGCGATCGCACTTTCAAAAGACCAAATAATCACATTTAAAGGATTTTGCTTTAAATCTTTTCATCGGAAGCAATAAAATCATCTCGTGAGATACCCGCTTGAGTGCAAATATTCCTTAGTGTAGAGCTTTTAATTTGCTTGTGATTCGGTAGCGTTAAAAGTGTTTTTGTTCCATCTGGATTTTTTCTAATCATAGAAATATGCTCTTTTTATCTAACAATTGAAAAACCAAATTTTTCAAGAACTTTAATCACTTTGGCTTTAGG # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCTTCCAATTCGTGAAGCGTATGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 9776-154 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXY010000053.1 Microcystis aeruginosa LEGE 91341 NODE_91_length_28467_cov_25.6135, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================================== ================== 9775 37 100.0 35 ..................................... ATACTCATCGATGGCGTGATTGTGACCCTGAGTGG 9703 37 100.0 34 ..................................... AGTTTAATGGTGCTTCCAGCATTTATTATGGCAC 9632 37 100.0 36 ..................................... CGATGGGCAAATATTGACTTTTTTTTAGTCCGAAAA 9559 37 100.0 35 ..................................... CAGCTATTTATGATTTTCCTTTTGGGCATTTAATC 9487 37 100.0 35 ..................................... AGTTTAGGCCGCTTTAATGACTTATCAAAAACAGA 9415 37 100.0 34 ..................................... TAGGGACTAATGGAGGAGCGCCAACTTATTCCGC 9344 37 100.0 37 ..................................... AAGGTTTACTGGGCGAATACCAGCCCCCACAGTTGGA 9270 37 100.0 34 ..................................... TCGGTAGAATTTTTGGGAGCTAATACTCAATCGG 9199 37 100.0 34 ..................................... CAGGCTCCGGCAAAATAAAATTGCCCTCTACCCC 9128 37 100.0 35 ..................................... AGCCACTGGGATCATCGCTCCCCTGTCCCAACAAG 9056 37 100.0 36 ..................................... TAGAGGTGCAAACCAATTACTATTTAGAGCGTCCTC 8983 37 100.0 36 ..................................... TTTAAAACCAAGGCCAAAGACTTAAAGGAATTAGAG 8910 37 100.0 35 ..................................... GACTACTCAACGGCTAGACGAACGACTAGGCAAAA 8838 37 100.0 37 ..................................... AATAAAGCCATAAAAGCAATCATCTCAGGGGAATCTG 8764 37 100.0 34 ..................................... CTCATCTATTCCGGGATCATAATTCCGATAGCAT 8693 37 100.0 36 ..................................... ATCTATCAATACTCTTAGTATTGTAACAGGTCTATG 8620 37 100.0 34 ..................................... CTGAGTCCATCATCTAAATATGTGGCCATATCCG 8549 37 100.0 33 ..................................... GGTACACAAAACTCCTCGGAATATCTGCGATTG 8479 37 100.0 37 ..................................... CGGGGGATCGTAGAATTAGGGTGGGCATTTTTGGGGG 8405 37 100.0 36 ..................................... CAGTCCGGATCGTTTAATCGAGGGCAGTCTATAATT 8332 37 100.0 34 ..................................... AAATTATTCTATAATTCCATTGATTATCTTCATG 8261 37 100.0 36 ..................................... CATCTTGGAAACTAGAAATTTCATTGACTTTTCCTA 8188 37 100.0 36 ..................................... ATTGATATTGTTAGAATCTAATCAGCAGCCGGGAGA 8115 37 100.0 35 ..................................... CTGGATCATATTTTTCCCGTAAGAAGTCAAACCGC 8043 37 100.0 40 ..................................... TGGTTTACATCTCTGTTTTCTTTAGCTGTTGACTTGCCAA 7966 37 100.0 36 ..................................... TTGCTACCCTTAAAGCTTCCTTCCAAAAATGAACAC 7893 37 100.0 37 ..................................... AAAATTTTAATTGTTCTTCTTTATCAGAGAAAGGATA 7819 37 100.0 36 ..................................... CTGCCCGTGTTTATTTAATTCATCGTACCGGTCCTT 7746 37 100.0 35 ..................................... ATGGAAGGGTGGAAATATGTATCAGAAAAATATTG 7674 37 100.0 34 ..................................... TGAAACAACTTTACACAACCTCGTAAGGAAAAAT 7603 37 100.0 33 ..................................... TTAAAAAGGTAAAGGTGTAATTATGGAAAAAGA 7533 37 100.0 35 ..................................... ACAGAATAACCTGATAGTAATGTATTACCTTGATA 7461 37 100.0 38 ..................................... GGCAGCCAATAGGGACACTTCCCCGACCGACCGAAAGA 7386 37 100.0 35 ..................................... ATCAGTAGCAGTTATCGCGCCACCAGTAGCTGTTG 7314 37 100.0 36 ..................................... TTACGACGAAGGAACTTTTGACGGTGTGCTAAAAAC 7241 37 100.0 38 ..................................... ACCCAGAAATAAACTGGGAGCAGACATATAAATCAACT 7166 37 100.0 35 ..................................... AATCTGTGGGAACCATAGAGGAAGTGATAGGAGAT 7094 37 100.0 35 ..................................... TTCTCGTCCGAATTTTCTAGAATATGCGGTTACAA 7022 37 100.0 35 ..................................... ACTTATGGCTCGTAAGAAGAAACTAGGCAATAAGG 6950 37 100.0 34 ..................................... CAATTGATAAATTAGAAACTAAGACCTTAAACCA 6879 37 100.0 34 ..................................... AAGCTAATACTCTCTCCCTCTTGTTGATTAGATT 6808 37 100.0 35 ..................................... AGTCTGACAACTTGTGATCACCTGCTGTATGCAGT 6736 37 100.0 35 ..................................... TCAATGTTATCCCTCTATAATCAAGAGAAGGAGAG 6664 37 100.0 35 ..................................... CATCTATTCTATCCTGAATGAGATGGTTTAAGGTC 6592 37 100.0 35 ..................................... TTGTATTCACACTAGCCCGCGCTGCGAAAACTGAA 6520 37 100.0 36 ..................................... CAATTGGATACCAATATCGAGGTGCTGAAAAAATTG 6447 37 100.0 38 ..................................... ATACGCTCATTAGCATCATTAGCAAGACCAACAATATA 6372 37 100.0 38 ..................................... GGGGAGATACATCGAGAATCGATGACTAAAAACTTCAT 6297 37 100.0 34 ..................................... TCGTGAACGTGAATAGTTTGATAGGGTGATTCAG 6226 37 100.0 34 ..................................... GATAAAAGAACATTGAACAACTCAACAATTTTGA 6155 37 100.0 34 ..................................... TAAAGATAACTTTCCCAATCTTAAAAACGGTAAG 6084 37 100.0 33 ..................................... CCCGATCAAGACTACAGGGGAATTACAAGTAAC 6014 37 100.0 34 ..................................... AGACGAATGTTCTAATTTTACCCATAAAAAGAAA 5943 37 100.0 35 ..................................... TCTTTTCTAAACATCTCAAAGGTAGGCAGATAAAG 5871 37 100.0 35 ..................................... GTATTTCTACAAAAATTGAAAAACCCGAAAATATT 5799 37 100.0 35 ..................................... TCCCTTACTTCTGGTAATGATCTGTTTTTCGATGG 5727 37 100.0 34 ..................................... AGTATCGCTCTCAAATTGAATCCTTGCAAGACCA 5656 37 100.0 34 ..................................... TACGATCCAAAAATCACAGAAATCTATGATGAAA 5585 37 100.0 35 ..................................... TTGGCAATCATCCATCCCTGATCATCCCCATCATC 5513 37 100.0 38 ..................................... TCGCTCGTAACTTTTAGACTCTTCCATAGATATTCCTG 5438 37 100.0 39 ..................................... TTGGCAATCATCCATCCCTGATCATCCCCATCATCAGAG 5362 37 100.0 34 ..................................... CATCGGCATAAATCCTGATCCAACCTAAGCTAAA 5291 37 100.0 37 ..................................... CGCGGCTATAGCCGTGATAGCCGCCATATCCCCACGA 5217 37 100.0 36 ..................................... CAATGATTTTTACCGTTGATGACCTCCTACTATTCG 5144 37 100.0 38 ..................................... GAGCGAGCACGTTCACCACATCAACGGGTGTAAGACTG 5069 37 100.0 36 ..................................... TGGTATTGTGGATGGGACGAATACTATAACAGGATT 4996 37 100.0 34 ..................................... TTCTCAAAGGTTTCATGATCAAGTTCTTTAGCCT 4925 37 100.0 34 ..................................... AATATTATTTTGTCATGAGCGGCGATAGAGTCAG 4854 37 100.0 36 ..................................... AAGACAAAAAAATAACCGCGCTCCCGGGTGGGTATA 4781 37 100.0 34 ..................................... ATCATAAACTAGAGAATACAAAACAAACAAAAAA 4710 37 100.0 38 ..................................... TTTTCTGTCCTGGGTTTTGGAGGATCGGTCAATTTTTT 4635 37 100.0 35 ..................................... TGACAACAATAGTGCGTCTAGCGTGTCAGCAGAAA 4563 37 100.0 36 ..................................... CTTAATCCTAAAGAAACAGAAGCTTATCTAGAATAT 4490 37 100.0 34 ..................................... GAACTAGACTGTTAGCCCCGACTCCAATAGGTAT 4419 37 100.0 35 ..................................... GTTGGAAGCGGCAGTGGGCAATACGTCTGGGCCTT 4347 37 100.0 34 ..................................... AAATCAAGGGGGATGATATTGCATTATGAAGAGC 4276 37 100.0 34 ..................................... GACGAAACCCAAAAAATCAAGGGGAAAACTCAAA 4205 37 100.0 37 ..................................... AATCATTGATACTCAGACAGGCGAAAGCTTTGCTAGT 4131 37 100.0 37 ..................................... ATCTGAGACATCTTCAATAAACTGACTGTTTTTTAAT 4057 37 100.0 37 ..................................... CCTTGTACAAACTAACCACTAATTCAGAAGAAGGAAC 3983 37 100.0 37 ..................................... AGTATAAATACTCCACTTGTCAGCAACCCCGCTCCGA 3909 37 100.0 33 ..................................... TAATTCTTTATCTGCATTAAAAAGAATCAAAAT 3839 37 100.0 38 ..................................... CTTACGAGCCTTAAAGGCTATGGCTTCGATTACTGCCT 3764 37 100.0 34 ..................................... CGATGAGTGCCGGAGGGCTTTCTCTTTCTACTGA 3693 37 100.0 34 ..................................... AGCAATCTACCTCCGATTACTCCATCTGTAGCAG 3622 37 100.0 35 ..................................... TCCGCCCCCCTGACATCGCTCTTTCGCGTTGAAAA 3550 37 100.0 39 ..................................... TTTTATCAAGAATCTCAAACCAAGTGCGATCAAATACTG 3474 37 100.0 36 ..................................... CATCTAATAAAATGATCAGTACAGCTATCGTTTCTA 3401 37 100.0 35 ..................................... AGAAGCAAAGCCAACTGAAAAAGTGATAATTCAGA 3329 37 100.0 33 ..................................... CAACTTGATGAAGTGAATAAAGATTAGCTAAGT 3259 37 100.0 34 ..................................... ATTGAGATTAAGCAGGGAACAACTTGGGACGAAG 3188 37 100.0 36 ..................................... TAATCACTTTTTATTGCTAACCTTGCCGTACATCTT 3115 37 100.0 37 ..................................... TTTGAGATTTACAGTAGCTTTTTAGCTTTTTCTCTTC 3041 37 100.0 34 ..................................... TTTAATTCTGCCGATCAATTCATCAAACATATAC 2970 37 100.0 35 ..................................... AAAAGTATTCGGTACTTTTATCTGTGGGGGTGGGT 2898 37 100.0 36 ..................................... AACTATTGAAGCTAGTAATATCTCAAGAGTTACTTT 2825 37 100.0 34 ..................................... TGCTGCCCGAACACTCCATCTACTTGACCAGAAG 2754 37 100.0 40 ..................................... TGGTGATCGAGTTTTTCCTTGTGGGTTGATTGATCGAAAA 2677 37 100.0 36 ..................................... GGTTACGCCATAAGCAGCCCTCCTAGACGCTCTACA 2604 37 100.0 33 ..................................... GTCATGGTACTTTCTACCATCCCAGAAGCCCTT 2534 37 100.0 35 ..................................... TAACTAGGGCATTCCGACCCGCCAACAAGCGGCGG 2462 37 100.0 35 ..................................... TCATCATCAGGATTATAAACAGGAATGCCATCAGG 2390 37 100.0 35 ..................................... TATCTTACCAGATTCTTCATTAACAAAAAGTGAAT 2318 37 100.0 34 ..................................... AAAAATGGAAATGGTAGCACCGCCGGCACCGAGC 2247 37 100.0 35 ..................................... AAAGGATATATGGTGAGAATGGGAGTCGATAAAAG 2175 37 100.0 34 ..................................... TCTATATCAATCCCAGTGCCACAAGGACCGGTAC 2104 37 100.0 34 ..................................... ATTTCAAAAGTGGAGCGAGAAGCGATACAAATGC 2033 37 100.0 39 ..................................... GCGACTAAAGGCTAAATAATTTAATTTTAAATGGGAAAG 1957 37 100.0 38 ..................................... AACTTATTTCGACGCCGCCGGAACCGCTACTGCTGCCG 1882 37 100.0 34 ..................................... TTTTTTAAATCACCCAAGGAGAAATCTAAATATT 1811 37 97.3 34 .......................T............. ACTTATAGTAAATGTGGCCAAGATTTGATCAAGG 1740 37 97.3 34 .......................T............. CGGGTTTTGGTGTAGGAGCGGCAACTTGAATAAT 1669 37 94.6 35 .................G.....T............. CTTCGATTGCCAAACAATATGGAATATCGGATCAG 1597 37 94.6 34 .................G.....T............. TAACACTCCCGGCCCAGAGCGCGGGAAAAAGGCA 1526 37 94.6 37 .................G.....T............. GGGGTTTACCTCACCCCGCGCTTCTAGCCATGCCTTG 1452 37 75.7 53 .................G.....TA.C..TG..C.GT CGTATGAGGTACAGTGTCACGAGCTATAAACCATGCTAGGCAAAGCTTGGTTT 1362 37 78.4 35 ......C.C..G....CG.TA..T............. TTTTAAATCGGTAATTGATAATCGAAACTCTTTAA C,CG,T,A [1341,1346,1357,1360] 1285 37 94.6 41 .................G.....T............. ATTGCCTTTACCGCCTGATCGGTACTGATTTAATCCCTCAA 1207 37 94.6 34 .................G.....T............. ATTTTTGCCCAAAAAACACCATAATTGAGGGTTT 1136 37 94.6 34 .................G.....T............. TTATATAAAATTAACTTATAGTTGTAACAATCAC 1065 37 94.6 34 .................G.....T............. GAGTATCACGTTGAATCACTTTTAGATGCTCTAT 994 37 94.6 35 .................G.....T............. CCAGTCCGTAAGCTTAATTCGTTAAGAAAGATTAA 922 37 94.6 33 .................G.....T............. AGCTAATCAGTATCGCGGGGGCCGCGGGTCCGA 852 37 94.6 34 .................G.....T............. TTAAGCCTCTCAAACCAATCATTAAGGTCATCCC 781 37 94.6 35 .................G.....T............. TTTTTGTGCAATCTGTTGCTATAGCCTCTATTTAT 709 37 94.6 34 .................G.....T............. GTACACCGACAGCTTTTCGCTATCAGTGCCGTAG 638 37 94.6 36 .................G.....T............. TTCCGTGAATATTTATACTCACGCTCACAGATTCAA 565 37 94.6 41 .................G.....T............. AAGGGAAGCGATAGAGCGGCGATTAAAATTTTTTGAGCGAT 487 37 94.6 35 .................G.....T............. GCTTATCCTGCTTTACAGGCATTAAATGCCGTCTG 415 37 94.6 36 .................G.....T............. CCAATATCTGAGAGAAAATTTTTAACATCTTTTTGG 342 37 94.6 36 .................G.....T............. TTCAATTGCCTTTAGTGTCGGACTAGACATTGAAGA 269 37 94.6 42 .................G.....T............. AGGATTTTTAGATGTAACTGGAGGGTTTACAATATCAAAAAA 190 37 94.6 0 .................G.....T............. | ========== ====== ====== ====== ===================================== ===================================================== ================== 133 37 98.8 36 GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Left flank : TTTGTTGTCAGTTACGACATTTCCGACGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCGATACCCAGTACGCTAAGCTCCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTCTGCGCCTGTTGTCGGGGTAAAGTGGAACGTATCGGTGGTGAGTTACCCCGGGATAATACAATTTTTTTTGTTTAGCTCGGTTGCGCCTCGGGGTTGCTGTAAAAATCCTTAACTATTATGTGGTGGCTGGAAAGCTTATGCAATATAGATTCGAGATGATTTTCCTTTCCAACGTGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGTTCTTGAAGAAGTGGGTCACTTGCTGTACAATGGGTTTATTGCGGGTGCGGCGCAAACGAACCTCGAAAACCCCATAGCGTATAGCTTTTACTACTGGGCG # Right flank : CAGCAAAGTTATCTGGCAATTTAAATCGGGAGCATCTCACCTTTGCAATAAGTAGAAATGCTTAATGAGATCAATAAAAAAGTTAAAAAAGGCAACCATTTAGATAAGCACAGCGATGACGAAGGACTTGCGGTACATTACCAGATTCCCAACT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA // Array 1 28936-35507 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEXY010000026.1 Microcystis aeruginosa LEGE 91341 NODE_60_length_35924_cov_23.7677, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================================================================================================================================================================ ================== 28936 36 97.2 36 .........C.......................... TTAAATCGCAGTGACAACCTCACTCCTAGCCGCGAT 29008 36 97.2 39 .........C.......................... CTGTTTTGTTTGGTTCTGGTGCTAGTTTTGTTGCGGTTC 29083 36 97.2 39 .........C.......................... GATCATTTTTAATCTCCTTTTTGTTTTTACTTACCTAGA 29158 36 97.2 37 .........C.......................... CAAGCCGATAGTCCGATAATTGTGGCTCCGAAGATTT 29231 36 97.2 37 .........C.......................... TGAGTATTCATGTTTTTTACTCCAAGGTTTTCTTGAA 29304 36 97.2 36 .........C.......................... TTCTAATAGAATTTGAGCGGTTTCTCGATCAAGAAA 29376 36 97.2 36 .........C.......................... GTCAGGGAACTTGATAAAAACCTCTTAAATGCCCAA 29448 36 97.2 40 .........C.......................... ACTTCTTCTATGGGAATTCCTTCGTTAGGAGATTTAGGAA 29524 36 97.2 36 .........C.......................... TTCGTACCGTTTGATCACTATCCAACGCCCATAATT 29596 36 97.2 39 .........C.......................... AAGATCGAAAGTAATCGGATCAGATCGGCTCGTTTAGGA 29671 36 97.2 41 .........C.......................... GAAAATAAGGCCGTCACCACGGCACTACTCCGAGAGGCTTT 29748 36 97.2 40 .........C.......................... ATTTCTGCAATACCCTCGGTAATGGCTTCAAATTGATCAG 29824 36 97.2 39 .........C.......................... AGGTCGTCATCTTGATGTTTAGGAGCCGGCATCAGGGAG 29899 36 97.2 38 .........C.......................... ATAGGAGTACGTTGTATACCGATGATTTGGCCTTCTTC 29973 36 97.2 37 .........C.......................... AGTAGTGGCACGAGTACCTGCGGTGCTGATAATGGAA 30046 36 97.2 36 .........C.......................... TCGTTACGTAGGAACCATTGTGGTTCCTTATATCAC 30118 36 97.2 44 .........C.......................... TGAGGGGCAAATGGCCCCGCCGGCCATTCGCGCCCATCAGATAA 30198 36 97.2 40 .........C.......................... GATACAGCGTTTGGTACGTGCGGCTTTGTCGGCTTTAATG 30274 36 97.2 43 .........C.......................... ACAATCACACCAGAAACCATTAGAGATTGCTATCTCGGATAGC 30353 36 97.2 36 .........C.......................... AATTAAAGTAATTTCTTTAATTCGATTAATAATTAC 30425 36 97.2 37 .........C.......................... TGATTTGATTGTTGTTGCTAGTAGCGGAGTTGGTAGA 30498 36 97.2 42 .........C.......................... ACAAACACATCACAAACCAACTTCTTCTGAATCATTTCTCAA 30576 36 97.2 40 .........C.......................... TCGATTCCGCTATCCTGCATTCGGAATCCCTATTAGGGAT 30652 36 97.2 39 .........C.......................... CTCAGTTACACCTAACTTAATGACTTTGCTGTTCATCTT 30727 36 97.2 35 .........C.......................... CCGGCGTAATCGCCGTATGCTTGAGCCATTTCTGG 30798 36 97.2 36 .........C.......................... ATAACACCGTGGAAGTCGGAGCAGCTACCTACGTTT 30870 36 97.2 36 .........C.......................... TGGTGACTAACCCCTTAATCGTTTGTTCATCGACTA 30942 36 97.2 44 .........C.......................... TTCCGCTACCGTATTCACGAGCGCATCATCGATACCTTTATTGA 31022 36 97.2 38 .........C.......................... TTACTGGATACTCGGCTTTAAATACCGAGGTTTGGGTT 31096 36 97.2 38 .........C.......................... TCTTTACCAGCAGAACGACTGATTATCAGGGAGATTAA 31170 36 100.0 37 .................................... TTTATGCGATCAATTATTGGATTACTAGAAGGGAAAA 31243 36 100.0 38 .................................... AAGCAGGGGAAACTAACTGGTCGATTGGTAATAATAGT 31317 36 100.0 36 .................................... TTCTAAGATAACATCTTCCCACACATCCGATTCTAA 31389 36 100.0 37 .................................... TCAGAAATGACCGCAGATGAAAAAGAGCGGCTTGATT 31462 36 100.0 36 .................................... CTGGGTAGCAGCAGTTACCCGACCACTAATCGCCTC 31534 36 100.0 38 .................................... CATCTATGAGGTAGACCCCAATCAGTATCAGGCTATCC 31608 36 97.2 35 .........C.......................... CTTACTACGCCAAGGGGGGTATATGCTTCCGCTAT 31679 36 97.2 37 .........C.......................... GCTGCTAGTGCTGCAGCTTTATATGCTTCTCGTTTGA 31752 36 94.4 37 .........C.......T.................. TATAGGCACTCTTCAAGTTGATCTCTGTCCACTCGGC 31825 36 94.4 36 .........C.......T.................. TAACACTGTTGTTATAAACGTATTCCCAGTCTAGTA 31897 36 94.4 36 .........C.......T.................. AGGGAGGAGGTCTTCCTTACGGGAGTAGGCCTTCCC 31969 36 94.4 37 .........C.......T.................. GGTTGATAGAGTTGATGGAATTGTTAGAGCTGATAGT 32042 36 94.4 37 .........C.......T.................. TTAACCCTCAAAATGGTGATGTTCTGCCCTTGATGAA 32115 36 94.4 41 .........C.......T.................. ATTGTTGCCGGCACTAGGAGGAAGTTCCACAGGTCCCACAG 32192 36 94.4 38 .........C.......T.................. ACATATATAAAACTCATAATGATCTGTTCCTCGCTTAT 32266 36 94.4 34 .........C.......T.................. TCTTAGAGCATTTTGTAAGGCTTGTGCAGCGCAA 32336 36 94.4 44 .........C.......T.................. CGCATGAGGCCAGCCTCGTAGGATTCCTCTACAGGATCAGCGAC 32416 36 94.4 36 .........C.......T.................. TTGAAATCTATGATCGATTTTGGAACCATTATAAAG 32488 36 94.4 41 .........C.......T.................. AAACCTTGTATTTAGACACGCCTAGATTTCCAGCAACTTGT 32565 36 94.4 38 .........C.......T.................. AGGATTGGGGAGCATGAACTACTTGCCGTGAGCTTGCC 32639 36 100.0 37 .................................... TTTTACTGTCGGTAGGCGATAGTTTAAATTAGTCATT 32712 36 100.0 36 .................................... CAATCTGTGATAGGTACGAGATACAGCCTGGCGAGA 32784 36 100.0 36 .................................... AACATGGTACTCAACCCCGTCAATCGTCGCAACTAA 32856 36 100.0 38 .................................... TTCCGTGTTTTCCTCCAAAATATTTTTGGTTAATTTGA 32930 36 100.0 37 .................................... AGTAGCTGAATTAAGAACCTTAGACGTAGCTGTATAA 33003 36 100.0 35 .................................... TGGAACTTTCTAGATCAACCGCGCCTAACCCCCTA 33074 36 100.0 35 .................................... TTCGGTGTCGGTGGGAATGTATGCGATGGTGACAA 33145 36 100.0 35 .................................... AGTTTGTCCTGTAAATACTGGTAAACTTCTTTCTG 33216 36 100.0 39 .................................... TAAATCACCCTCTACCACAAAATTAGAGGCTATTGCTAT 33291 36 100.0 36 .................................... TCACAGATGATATCGTTAACAGAAAAGTATTGTACA 33363 36 100.0 204 .................................... CAATTAGTGCAGATTGCGACAACTCAAACCTTGTCTAGACTCTCTACTAGCTAGAGAAATTATAGCGTTTCCTGTTCTCACGAGGTACATTGTTGATGGTAAAAAGTTTAATCAGCAGAAGTTTGACTATACCACACAGGTGTGAGAAACGCTATAATTGAATGGAAACTCAGGGAGTTACTGCGGGGGATAGCGATAATCCAG 33603 36 100.0 39 .................................... TTTTTCCGATCAATCGAAGGATATAGCCACACTTTTTTG 33678 36 100.0 36 .................................... CTCCTCTACCATCTTGTTAGTGCTAAAGCCTTGCAA 33750 36 100.0 36 .................................... AAATGATTAATGTAATTCAAAGAAATAAAGAAACTC 33822 36 100.0 39 .................................... TCGATCAAATTTTTTCGCAATTGCTGAAAAACCTTAAAA 33897 36 100.0 39 .................................... CAATAAAAACTAGGAAAAGGATTGACATTTTCTAGCTCT 33972 36 100.0 37 .................................... GTGCATATTACACAATCCCCAAGCGTTAGGTAATTTC 34045 36 100.0 37 .................................... CTTGGTGGGTAATGTTCGGAGCTTGGCTAGTTGTTAG 34118 36 100.0 37 .................................... TGGAACTTAATCCGTAAAATTTGCACAGCTTGCGGAG 34191 36 100.0 41 .................................... TTCATTTCTTTCAGCGATTATCTCCCCGTGTGTGACGATGT 34268 36 100.0 36 .................................... AGTGCATTCGCATATGTAAAATTCAAAATGATCTGT 34340 36 100.0 38 .................................... TATTTTCGGATTTGAATGATTCGTACACCTTGATAAAA 34414 36 100.0 41 .................................... GTAATCAAGGTGAACATAGCCCGATTCATGGAGTTTTTTAA 34491 36 100.0 40 .................................... TTCATGAGTCCGTAAAAGGTTCAAAAGGCGATTTTTTCTA 34567 36 100.0 37 .................................... ATTGTAAATAGAGGTATTTACAATGGAATTCTTGATA 34640 36 100.0 35 .................................... CCACTAGCTTGTTTTTCTTGTATTTGTCTTTTCTT 34711 36 100.0 37 .................................... ATTGTAAATAGAGGTATTTACAATGGAATTCTTGATA 34784 36 100.0 135 .................................... CCACTAGCTTGTTTTTCTTGTATTTGTCTTTTCTTCTCTCTACTATAGCAAAGATCGGGGTGGTTAGGACAATCAATCGCTGAAACCCTTGACCGATAAGAGTTTGAAAATTGAAAGCGTCCTAAATAACCCATT 34955 35 91.7 38 T.T....-............................ TCATTTTAGTCGTTGAAAGTGACAATTATGAACTTTAC G [34958] 35029 36 100.0 35 .................................... TGAAAAGTCTTACTGCGTTGCTTGCCTAGCTTTAG 35100 36 100.0 39 .................................... TCATCGAAGCTGTGGTTTATGGGGAGATCGAGGGACTCC 35175 36 100.0 35 .................................... GAAGCTATTGTGTTTTCAGTAGCGTGTTTTTTAGA 35246 36 100.0 44 .................................... ATGATTTACTCTGTGGTAGTAATTGTGATGAGTCCCCCGTTAAC 35326 36 100.0 35 .................................... TAAAGTATAAATTGGTGGAATGCGTGGATAGGCAC 35397 36 100.0 39 .................................... AATCTAGATATTTTAGACGGCTCACCTCCCTGCTCTTCA 35472 36 97.2 0 .........C.......................... | ========== ====== ====== ====== ==================================== ============================================================================================================================================================================================================ ================== 86 36 98.0 41 CTCTCTACTAGCTAGAGAAATTAATTGAATGGAAAC # Left flank : AGTTTTCAATACCTACCTACTTAATCATGTTATTTTATGTCATCGCCTATGATATTCCCTGCAATAAAAGACGTAAAAAAGTGGCTGATTTACTAGAAGGATACGGCCAACGGGTTCAGTATTCAGTTTTCGAGTGTGTTTTAAGCAAATCTCTATACAATCAGTTAAGAGAACGTCTGCAAAAGCAAATCAAAGAAAACGAGGATAGTATTCGATTTTACCCCATCTCTGGCCATACTTTAGCACAAATAGAGACTTTAGGCGGTGTCCCACTAACTAAACCGCCAAGTTCTACGATCATCTGATTCGGTATCATCGACTAGCGACCGACAGGGGTGGGAGCAGATAACCTCGATTTCTGGTAAAATCCCTCGATCTACCACAGGATAAGAATTTTGGGGTTTATGGGGTTAGCTGTGCGACCGTATCCAGCTATAATTAAACTATCGGTCGCAACTGGCTTCTGAATCTCAATCCTGTTCGGACGTTTGCCCACCGGC # Right flank : CCATCATTTAATTATTTCGGCTCTTCCGAACTTGTCATGTAAAATTACAGAAAAAACAGACAACTATTGCTGACCAATAAAACAATAATTTATCTTTAAAAGCTCACTATGCTTGCAATACAGCAATTTATTGGTTAAAATATAGACAGCCAAGACCAGCAATTTTAGACACAAGCTATACTTATGCCATCAAATCCACAATTAAAGTTAATGACCGAGCTACTTCACCTAGAAGGAGTTGTCGTTACCAATTATCAAATTATTACCGATATAGAAATTGTTTTACATTTAGAAAATATGTCAAGAGAAAGCCAGTGCATTCATTGTGGAAGTAAAACGGAAAAAGTTCATCAAAACAATGAATTAACAATCCGAGATTTACCCTTTGGAGAACAGGCATTATATCTGAGAATTAAT # Questionable array : NO Score: 2.52 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.28, 8:1, 9:0.65, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTAGCTAGAGAAATTAATTGAATGGAAAC # Alternate repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //