Array 1 55353-57584 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWEK01000003.1 Lactobacillus helveticus strain DLBSA202 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 55353 32 100.0 34 ................................ AATGACTGATGAACAAAAGACAGCATTGAAGAAT 55419 32 100.0 36 ................................ TGTTCAGCTCTATCTTGATGTCAAAGATCCTAACGG 55487 32 100.0 36 ................................ ATTCTGTAAGGACTGAAACACAAACTCTAAAATATA 55555 32 100.0 34 ................................ ATCGTTATGCAGGTATTACTACTGCTACTAATAC 55621 32 100.0 35 ................................ TCAGGAGATACTGCCGTTGGCTTTGAAGATAAATA 55688 32 100.0 35 ................................ AATTCATTACTGGCATTACTCCAGTCACTGCGCCA 55755 32 100.0 35 ................................ GAAAGGAAATATATATGTCAGTCAAAGTTAATGGT 55822 32 100.0 35 ................................ GATTTTGTTAGAAAATTAACCGATGATTTTTTACA 55889 32 100.0 34 ................................ TACCCACCTAGCTTAGCACCTACATGGAATGACA 55955 32 100.0 36 ................................ CATTGTAGTAAAAGTTGCAGGGTCTTGAGTAAGAAC 56023 32 100.0 34 ................................ AATTAAGTCTAATCATAGGGGCAATAATTGCTTA 56089 32 100.0 35 ................................ TTTTTCGTCTTCTGCTCCTAGTGACTTAGTGAGCC 56156 32 100.0 34 ................................ AAGTGAATCGACAGGTATTGCAGATGATGATTTA 56222 32 100.0 35 ................................ AAGATGTGGAAGAGTGCAAGCACACACAGTCCCAA 56289 32 100.0 34 ................................ TTAGAATACTTATGATCCTTAGATAGATGAACCG 56355 32 100.0 35 ................................ CTCTGATCTGCTCAGCACGTTGCTCTTGCTTTGAA 56422 32 100.0 35 ................................ GATTATTCGGAACAACAGATGATCCTAAATGCTCA 56489 32 100.0 35 ................................ CTAAAGCATACTTAGTAGCATATGAACTGGCTGAC 56556 32 100.0 34 ................................ TACAAACACTTGCCAACTTATAATCCACAAATGC 56622 32 100.0 34 ................................ AAAGGTGTGTGGATACCTGCTGAATATTGGTTAG 56688 32 100.0 35 ................................ AGCATCAACGGCTCTAATTATGTCATTGCCGGTTT 56755 32 100.0 34 ................................ ACCTGATCAAACGTTAGGCAATAGATTAACCGAA 56821 32 100.0 34 ................................ TTTACGAATGTCTTGCCAATTAGTATATTTACTT 56887 32 100.0 34 ................................ AGAATCAAGACCACCTGTTAGCGTTTTACCACCG 56953 32 100.0 35 ................................ AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA 57020 32 100.0 36 ................................ GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC 57088 32 100.0 34 ................................ AGAAGATGGATACAATTTTTAGAAATTCCAGTCT 57154 32 100.0 35 ................................ ACACCATATGTGGTCAACGCTTTAATTGGATTACG 57221 32 100.0 34 ................................ ACTAACTGGAACATCCAAGTACTGTGCGGAAACC 57287 32 100.0 35 ................................ ATCGGCTAATTGCTTTTCAAGTGAATCAGCCTTTG 57354 32 100.0 34 ................................ ACTGAGACGCTAGACGCTATTAGATCACAGTCAC 57420 32 100.0 35 ................................ ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA 57487 32 100.0 34 ................................ TTTTGAATAGATGGCATGTAAGTCTGATATAGTT 57553 32 96.9 0 ...........C.................... | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.9 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //