Array 1 9562-11237 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHCVC010000014.1 Streptococcus salivarius strain AGIRA0003 AGIRA0003_CONTIG_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 9562 28 100.0 33 ............................ TGACAATTTAGTTAGCTATGACAAATACTTAGC 9623 28 100.0 33 ............................ CAACGGACGCCGTCCTGTTGCCTTCCTTGTATC 9684 28 100.0 33 ............................ TCGATGTCGTCTGCGAGTTGTGGAAAGTAGCTA 9745 28 100.0 34 ............................ CACTTCGATATCAGTATCCGCAAAAGCGAAAGGA 9807 28 100.0 33 ............................ CGCGCTAGGCGAGGGGAACGCAAAAGGCAAAGA 9868 28 100.0 33 ............................ CGGTCGACCGTAATCGTACGGCTTGGTACAATT 9929 28 100.0 33 ............................ TACAATTCCATAACTGCCAAATTCTTCAATTTT 9990 28 100.0 33 ............................ CAGACAAGGCTCCTGATACAAGCGCTAGTCATG 10051 28 100.0 33 ............................ CGAGGGGTAATGATGAAGAAACTAATTACTACT 10112 28 100.0 33 ............................ CAAAACATCAAGCTGATTATCTTCTACGTACTC 10173 28 100.0 33 ............................ CGAAAGGTGCGCAGTTCTTGCTCATCTTTACGC 10234 28 100.0 33 ............................ CGAACGCCGCTTATTTGCTCGTACGTTTGGCGA 10295 28 100.0 33 ............................ TGTGATGTTGTAATAGAGACCGTTTTGATTATC 10356 28 100.0 33 ............................ CAACCTCAAGAACCATGGTGTCACGTTTACTGC 10417 28 100.0 33 ............................ TGATAGGTGCGATGGCTATAATCGTATCTGAAA 10478 28 100.0 33 ............................ CGCAACAGTTTGATTAAAAAAAGAAAAGCACCG 10539 28 100.0 33 ............................ CATTGATAGCTTGCAAACGTCCACCCTTGGTTA 10600 28 100.0 33 ............................ CGTTTCCCACGCTCCAGACCAGTCACCTTGTAG 10661 28 100.0 33 ............................ TCCGGCTCATCGTCAAATGTGACTTCAAGATAA 10722 28 100.0 33 ............................ CCCGTTTCGTGACCACTCGTTAGAACTAAACTC 10783 28 100.0 33 ............................ TGAAGCCCCGGTTTACGACAAGCCAGAATGGAA 10844 28 100.0 33 ............................ CGGAGAATTCGATGAAGGGTATATACGTATTGA 10905 28 100.0 33 ............................ TACTGGCTTTGGACAACCAGAAGAACAAAATTA 10966 28 100.0 33 ............................ CTTGAAGCGTTATTCCCTTCAGTTGGTGCTGGA 11027 28 96.4 33 ..........................G. GTTGTTTTGATAAATGTTGATTCATCTATCAAG 11088 28 92.9 33 T...................A....... TAGTTTTACGTCCTATCTCATGTACTTCTTCAG 11149 28 89.3 33 .C.................A...T.... TAGACTTCTTCGCTAGATGACGATTTACTTGTT 11210 28 75.0 0 ..........T...T.T.A.TA....T. | ========== ====== ====== ====== ============================ ================================== ================== 28 28 98.3 33 GTTTTTCCCGCACACGCGGGGGTGATCC # Left flank : GAGAAAAAGAATACAATTATTGAGATTGGAGCAGTCAAGTTTAATGGACAACAAGTAGAGGAATTTAATGCTTTGATTAAGTATGAGGAGAAATTACCTCCTACAATTTCTAAATTGACAGGAATTTCTAAAACCTTATTAGATAAAGAAGGACGTGATTTAAAAGAAGTACTTTCTGAATTCTTATTATTTATTGGTGATTTAACTATAGTCGGCTATAATATCCATTTTGATATTCAGTTTATCAATAATAAACTGAATAAATTAGGTTTACCCTTATTAATAAATAAAACTCATGATATAATGAGATATGTCAAGAATGAGAAGTTATTCTTGGATAATTATCAATTGCAGACTGCCCTAAAGGCATATGGGATCGAGGATCAAGTTCCTCATAGAGCGTTGAAAGATGCTAGACTAATCTATCATTTATCAACTAAAGTAAATAAATTCTTAGCTAGAATGAAAGAAAAGTCTTAATTTCATTGGGACCTTTTAGT # Right flank : CTATTAATTAGGAAACGCCTGACTTTAGCTAACAGTATGGTACAATTTAATTGAATTAAGAGTGAATTTTTTGTTTTTTTATGGAAAATAATCAATTTACATTTATCCTATAGTTAATTGTTTGCACGTAGATCAGATGTAATCAAGGATTGTTATTGCTCGATTTGAGAATAGGAGCATTTGTTATTATCTCTAATTGTACAATTGTTAAAAAAACAATTAATCTATTTCGGGAGTTTTAAAGATTGTAGATATAGAAAGTAGTAGTTTGATGGAGAAACAAACAAAAGTTTAATGCTATCGAATGACATATGATTATGGCATTAATCCGTTTGTATTTACTGAAGATTATGAATCCACACCAGATTTGTTGACTGAAGATGGCTGTATGATTCAATACGGCAACATCTAAAAAAGAATTGGGCTGATAGGATTAATTCTGGTGGTATTGATGCTTATATAATGGCAATTGCTAGGCATTCAAATGATGGTGGTAAGTG # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //