Array 1 202344-203633 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031266.1 Staphylococcus agnetis strain 12B chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 202344 36 100.0 30 .................................... TTTTCTCCTGATTTGGTGTGTTTGTACCTA 202410 36 100.0 30 .................................... CCAGATTGGCGTATGTTTACGAATTATCAT 202476 36 100.0 30 .................................... AAGAATAGCTAATCCTAACGTTGTGCTTAC 202542 36 100.0 30 .................................... CAATAAAGTGAGGTAATTATTCATGGGTGT 202608 36 100.0 30 .................................... AAATTAGAAAAAGTTCTTGAAAAACATGGT 202674 36 100.0 30 .................................... TCGAACCAGCGATAGACCTAAGCGACTGCA 202740 36 100.0 30 .................................... AGATTATAGCGTTAACAGTTCAGCTTTCAC 202806 36 100.0 31 .................................... CTTAACGGGCTATATAGCTCACTCCTACTAT 202873 36 100.0 30 .................................... ATGGGTAAACAGCGTCCTCTTGAACTACAT 202939 36 100.0 30 .................................... AAGTGCCAGACAGGCACCAAATAACGTACC 203005 36 100.0 30 .................................... CGACTTTGAAGGGGTTCCTTTGAGTGAGGC 203071 36 100.0 30 .................................... TTGTTAACCCAGACGGTATTGATGAAGTAG 203137 36 100.0 30 .................................... TGAACGCCAACCATTTGTATCACCGTTAAC 203203 36 100.0 30 .................................... GGTTATGACGGAAGATTATCACACCGCAAT 203269 36 100.0 30 .................................... AAAGTATTCTAAAGACATGGAGAAATGGGT 203335 36 100.0 30 .................................... TTAGGATTATTGTAAATTGCTTTGACGACT 203401 36 100.0 30 .................................... AGTATCTGCAATAAATCATCGAATTTAACA 203467 36 100.0 30 .................................... TTATGTGTTGCATTTATATGATATAGCAAT 203533 36 100.0 29 .................................... CCAAAAGAATCGGCGTTGTGGCGCAGAAA 203598 36 77.8 0 T........................G.TTT.AT..A | ========== ====== ====== ====== ==================================== =============================== ================== 20 36 98.9 30 GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC # Left flank : GACGTTCACGATGTACAATAACGCCATCTTCATTTTCTTTTTCATTATTTTCAGTGTGAGCTGCAGCTATAGTTAAAATGTTGTGGTCAAAATCAACGTGAATGTCTGATTTTGCCATACCTGGAAGTTCAGCGCTTACAACATATGCATCTTCACGTTCAGAAATATCTGTTTTAAAAGCTTGAGATTGCATTAAACCTTGCCCAAAATCTTTAAAAAGATCACTCGGATTCATATCAAAAATAGAATGATTAAATGGTTTTAATTGGAATGCCATAAAGCATCGCTCCTTCATATTTTAGAATGTCGCAAATATCAAGAAACTGAAATGGTAAAGGTCACATCTAATCCTTTACAATCTTATTATATGACAAAGGTCAAAAATAGTCAAGGTCAAAGTATTGTGGTGGATGTAAATTAAAATTTATCCAAAATACGTAAAGATCAGTGATATCAATGGATTAGACAAACTTAAAAGTTATAGTATACTGTAGCTAGAG # Right flank : ATGTGCTATTTATGAAATATCTATATAAGCGATCCATTTATTTTAGCGATAACCTCATAAAATTGTTTAACTCAATGAAATAAATGTTATTTAGGTGGAAGTTATAACACTCACTCTATAAAAAATATCAGAAAATTCTTGACTCAAATGGATCTTATGATAAAATAAATTTACAAGTACTTATTTGTGCTTATACCTAAAATTACAGAATCTACTAAAACAAGACTATATGTCGTGTTTATCCCACTAATTTATTAGTGGGAATTTTTTTGTTCTTCTTTTATAATAGTATTTAAAAGGGAGGGCAATGTATAAATGAATAATTATATACTAGGACTCGATATAGGTATTACCTCAGTGGGATACGGTATTGTAGATAGTGATACGCGTGAAATTAAAGATGCTGGGGTACGATTGTTTCCAGAAGCGAATGTAGATAATAATGAAGGGAGACGTAGTAAAAGGGGAGCGCGACGTTTAAAAAGAAGACGAATTCATAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACTCTGTAATTTTAGGTATAAGTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGTACTCTGTAATTTTAGGTATAAGTGATTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //