Array 1 68213-69388 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH992937.1 Veillonella seminalis ACS-216-V-Col6b supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 68213 33 100.0 33 ................................. GCTTCCATCCAACCGGATGTAGCCCCGACTAAC 68279 33 100.0 34 ................................. TTGCCCGCCTTGCTCAATCCGTTCGGTAGGCGTA 68346 33 100.0 34 ................................. GGAATCATCTACCGCCGGCATAACTCGCTGTTCA 68413 33 100.0 34 ................................. CCAGAGTCTAAAATAAGCAAGGGAATGTTATCAC 68480 33 100.0 34 ................................. TACCAATGCTATTAGTGATGCTCAAAAATCTAGC 68547 33 100.0 35 ................................. ATTGTTGTAATAATCTGCATCAATAATACCTGTTC 68615 33 100.0 35 ................................. TCTAAAAATTTAAAATTCTATATGAATTTATATAA 68683 33 100.0 34 ................................. GTCGAGGTGGAGAATCTATTTCGAGCCCTCTTAT 68750 33 100.0 34 ................................. TACTTTTAGCTCAAAGTTAAATCAAAGTGGAGCT 68817 33 100.0 35 ................................. TGCGGCGAAAGACATTTCAAAGGAATCCATGCAAA 68885 33 100.0 35 ................................. ATTAGATAAGTGTGCAACATAATGCATGTTAGTAG 68953 33 100.0 34 ................................. ATTGCCACAAGCTGTGTTAGAAAAAACGGATAGA 69020 33 100.0 34 ................................. TGCATAGGTAGCACTTTGTATCATGCTGTCATTC 69087 33 100.0 34 ................................. ATATAGTCATTTTCCGGATTATATACATATGAGA 69154 33 100.0 34 ................................. GTTACGATCCATGAACGAGTACATAAAAAATAAC 69221 33 100.0 35 ................................. TTGGTACGGCGATGAAGTAACGCCTAAACAATTTA 69289 33 100.0 34 ................................. TTTTGTTTTTGTTAACTTGAACCTTGGTGATGTC 69356 33 87.9 0 ....................A.AAT........ | ========== ====== ====== ====== ================================= =================================== ================== 18 33 99.3 34 GTCACTACCTTTGTTGGTAGTGTGGATTGAAGT # Left flank : CTACCGAAAGATATAAGCCAAGTGGCTGATGTTTTTTATTCCTAAAGGAGGAATGACGTATGAAAGACAAATATGTTTGCTCGGTTTGCGGTTATGTGTATGATGAAGCGGCTGAAGGCGTAGCTTTTGCCGACTTGCCTGATGATTGGGAATGCCCTACTTGCGGCGTGCCAAAATCTAAATTTGAAAAAATGTAAGAGACATTATTGATTGTTTAAAATGATTATTTTGTAAGGGTAAAAACGACTGCTCCTGTTTGGGCAGTCGTTTTGTTTAAAGTGCTTGAAATATGTGGTAGAATTGAAGTAGAAATACCTTTTGTTCAGAGCGAAGTTTGCTTAGTGCGAATGGGGAGTATTGTGTCAATTACTATGAGATTCGCACTATTATATATGCAATTTCTATTATAAAAAATAATAAGACAGAGCGTACATATTATATTTTATTGTTTAAAAAGACTATTAGCTGAATATTGTAGTATTTATTTATGATATTTAGCT # Right flank : TACTACGACACCAATAAGAGGGTTCGGTGTTTTAAGTTTTTATTTTTGTAGGTATAGGGGATAGATGAGTATAAAGGGGTTATTTAATCTCTAGTATTTGATTTTAAATGCAGAAAGTTGACAAAAAGCGCATCTCTGAATTGGAGATGTGCTTTTTAATTTGGCTCATTTTTTATAGGTATTTTACATAATGCATAACATAATTGTTATTTTAGAATAATAAGAGTATAATTTAGTCAATAAAGTGTTATAAATATCAAAGGGAGATTTATATGGGAGAATTAATTGCTCATATTGCTGATTTTTCAAATATTAATTTAAAAAAAGAACAATCCTTGTTTGAACATTTGAAAAATTGTGCTATTCATTCTCAAGAGTTGGCATCGGATATTGGAATTCCGACAATGTGTTTTTTAGTGGGGTTATTGCATGATGCGGGGAAAAGTAGCGTAGCATTCCAAGAATATATTCGAGGTAATAATAAGGGGCATGTTATACAT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTACCTTTGTTGGTAGTGTGGATTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 78599-79778 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH992937.1 Veillonella seminalis ACS-216-V-Col6b supercont1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 78599 33 100.0 35 ................................. TTTACTATTGGTATGTACCAAGAGTTTAAAATTTT 78667 33 100.0 34 ................................. CAAAAGGAACTCTTATTGGTAATGGTAGCAAGGT 78734 33 100.0 34 ................................. ACGCAATACACGTTTTAAAACTAGGGTCTCACCT 78801 33 100.0 34 ................................. ACATGCTTCATCAAGTAGTACATAGGGTTCTTCT 78868 33 100.0 34 ................................. AATATGGAGAGAAAATATTGACAACGTAAGTACA 78935 33 100.0 35 ................................. CATGAGTTTTGCAACTTTTGGCGGTCTCAAGTAAA 79003 33 100.0 35 ................................. TATGATTACTACCCTGAGATATATAATGCAAAAAC 79071 33 100.0 34 ................................. CTAAATCTTTTTCATAATTAGCGGTTCCGCTTTC 79138 33 100.0 34 ................................. TGCAAGTTCAAAGGCGGATGGAGCGGACGCATCA 79205 33 100.0 35 ................................. ATTTTGGCAACTCTCAAATATTCGGCGGCCATAGT 79273 33 100.0 34 ................................. CCCCGGATAATTTACCAGGGAACTATAAATAGCT 79340 33 100.0 35 ................................. CAACAACAATAGAACAAGTTTTAATGATTCTGCTG 79408 33 100.0 34 ................................. TCTCCTATACTTTTCATTTTCTCACCACCTTTCT 79475 33 100.0 35 ................................. TCCATAGTTTTAGCATGTGTGCCTAATAAATAAGC 79543 33 100.0 34 ................................. GGTAATTCCTAAGATGTGAGCCCCTTCCTTGATT 79610 33 100.0 35 ................................. TTTAAGAAAGGAGTATTAATGCGTTTGTGTAGTAT 79678 33 100.0 35 ................................. GTGCTGTAAGGCCTTGATGCGGTCTTGAAGCTCGG 79746 33 97.0 0 ...............................A. | ========== ====== ====== ====== ================================= =================================== ================== 18 33 99.8 35 GTCTCTACCCGTTTGGGTAGAGTGGATTGAAGT # Left flank : TGTACTGGTTGCTTATGATATCAATACAGAAACCGCTGAAGGAAGACGAAGATTACGACAGGTTGCTAAAACGTGTTTAAACTACGGACAACGAGTACAAAACTCCATCTTTGAATGTAGTGTAGACGAGGGTGAGTTTCGTAGGTTAAAATATGAATTAAAGAAGATTATTGATTCTGAGTTAGATAACCTTCGGTTTTATCGATTAGGGAAAAACTATAAAAACAGTATTGAAACAATGGGACAAGATAGATCCTATGATGTTGAAGGTCCATTGATTATCTAACTAGATATCTACGGATGATATCGGTTTAATTTTGAAAAAGTTGTTTTATAATATTGGTGCGGATATGAAGCAGTTGATAAAGTGTGGAGGATTCGCACTGATATTTGTAATGTTTGATAAGTTGTGATTTGCAGTTGCAGGTTAATAATTAGGTTAGTTTATTAAGAATTGTAGTTTTGCTGGGTGTGGTACCTTTTATGTACCATATGTAGCT # Right flank : TTTACTGGCATAGGAAAGCTTCATTGCATCAAGGACGTCTCTGCTCTTGTTGGCAGGATGTATTAAGGTTGGTAAAAATAAATATTTGCCGGTGATTTAGCCTCAGCTCATTTTGAGGGGGGGATTTTTGCGTTTATAAAGAATTAATTTATATGAATTTGATTTAAAAGCTGCTACAATAATCTTAACAGGTATAATAGTTTTCAATTTTAATTTGATACTTTTTAGGCAGAAAAAGCTGCAAGACACAATGGTTGTATTATTATCATGTTGAAGTTGAGCTATTGGTCAATTTAGAGGGAGTTGTTTTTAAAGGAGCTTAATCATGTTTGAAGAGCAAATTGAACGGATTCGCAAAGGGATTGAAACAGCTTTTATTAGTAAACATGAAGTGTCGGATATTATGTATCAACCTCAATTGGTACTTAATAACCCGACAGAAAAGTCAAAGGTAATAGCCACATTGCAGCGTGAGCTTTATCGTTGTGACAGTTTTAAAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCTACCCGTTTGGGTAGAGTGGATTGAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.30,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //